Wall clock time and date at job start Mon Mar 30 2020 02:23:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.34850 * 126.29507 * 2 1 4 4 N 1.36348 * 108.21820 * 179.75785 * 3 2 1 5 5 C 1.46500 * 125.63258 * 180.21917 * 4 3 2 6 6 C 1.52997 * 109.47458 * 265.02653 * 5 4 3 7 7 C 1.50697 * 109.47568 * 180.02562 * 6 5 4 8 8 H 1.08004 * 119.99637 * 0.02562 * 7 6 5 9 9 C 1.37875 * 120.00001 * 179.97438 * 7 6 5 10 10 N 1.31518 * 119.99856 * 180.02562 * 9 7 6 11 11 Si 1.86792 * 120.00278 * 0.02562 * 9 7 6 12 12 H 1.48498 * 109.47540 * 89.99655 * 11 9 7 13 13 H 1.48502 * 109.47433 * 209.99971 * 11 9 7 14 14 H 1.48507 * 109.47241 * 329.99671 * 11 9 7 15 15 C 1.36341 * 108.73078 * 0.24359 * 4 3 2 16 16 C 1.50690 * 125.89174 * 180.02562 * 15 4 3 17 17 C 1.34858 * 108.21705 * 359.97438 * 15 4 3 18 18 C 1.50695 * 126.29153 * 180.02562 * 17 15 4 19 19 H 1.08994 * 109.47213 * 90.02385 * 1 2 3 20 20 H 1.08997 * 109.47297 * 210.03036 * 1 2 3 21 21 H 1.09005 * 109.46640 * 330.02584 * 1 2 3 22 22 H 1.08002 * 125.89234 * 0.02698 * 3 2 1 23 23 H 1.09005 * 109.47067 * 25.03115 * 5 4 3 24 24 H 1.09003 * 109.46766 * 145.02353 * 5 4 3 25 25 H 1.09001 * 109.46706 * 300.00606 * 6 5 4 26 26 H 1.08997 * 109.46956 * 60.00216 * 6 5 4 27 27 H 0.96996 * 120.00275 * 180.02562 * 10 9 7 28 28 H 1.09004 * 109.47660 * 89.99846 * 16 15 4 29 29 H 1.09006 * 109.47344 * 209.99847 * 16 15 4 30 30 H 1.09004 * 109.47224 * 330.00116 * 16 15 4 31 31 H 1.09006 * 109.46914 * 90.00087 * 18 17 15 32 32 H 1.08999 * 109.47368 * 209.99937 * 18 17 15 33 33 H 1.08999 * 109.47385 * 330.00146 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3052 1.0869 0.0000 4 7 3.6014 0.6638 0.0055 5 6 4.7822 1.5309 0.0119 6 6 5.2739 1.7336 -1.4227 7 6 6.4889 2.6251 -1.4160 8 1 6.8723 3.0084 -0.4819 9 6 7.1117 2.9505 -2.6023 10 7 8.1723 3.7281 -2.5965 11 14 6.4490 2.2870 -4.2178 12 1 5.4492 3.2361 -4.7699 13 1 7.5661 2.1278 -5.1831 14 1 5.8046 0.9695 -3.9848 15 6 3.6170 -0.6995 0.0034 16 6 4.8477 -1.5690 0.0085 17 6 2.3409 -1.1357 -0.0027 18 6 1.8897 -2.5736 -0.0063 19 1 -0.3633 -0.0004 -1.0276 20 1 -0.3634 -0.8897 0.5143 21 1 -0.3633 0.8903 0.5135 22 1 1.9748 2.1151 0.0004 23 1 4.5219 2.4960 0.4466 24 1 5.5707 1.0665 0.6041 25 1 5.5341 0.7685 -1.8573 26 1 4.4854 2.1980 -2.0148 27 1 8.6103 3.9573 -3.4310 28 1 5.1393 -1.7802 1.0373 29 1 4.6337 -2.5048 -0.5079 30 1 5.6607 -1.0509 -0.5004 31 1 1.7764 -2.9213 1.0206 32 1 0.9341 -2.6533 -0.5244 33 1 2.6324 -3.1861 -0.5175 RHF calculation, no. of doubly occupied orbitals= 39 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068944340.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:23:32 Heat of formation + Delta-G solvation = 20.369528 kcal Electronic energy + Delta-G solvation = -13381.969056 eV Core-core repulsion = 11214.588288 eV Total energy + Delta-G solvation = -2167.380769 eV No. of doubly occupied orbitals = 39 Molecular weight (most abundant/longest-lived isotopes) = 207.132 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -40.88671 -34.68461 -32.74830 -32.01491 -30.57583 -28.46194 -26.94241 -24.51669 -23.69191 -20.82755 -18.86193 -18.28119 -17.04510 -15.51191 -14.83946 -14.16138 -14.00223 -13.58840 -12.94945 -12.80356 -12.65343 -12.49578 -12.33207 -12.23570 -12.16379 -11.72811 -11.47609 -11.28404 -11.05765 -10.66871 -10.29462 -10.15647 -9.93455 -9.41604 -8.67380 -7.71707 -7.37239 -6.18274 -4.19336 2.76688 3.23661 3.29737 3.31510 3.36634 3.59763 4.34335 5.15316 5.29535 5.36686 5.51341 5.56961 5.72525 5.81765 5.88014 5.88948 5.90896 5.94167 6.02133 6.05602 6.21473 6.24269 6.30082 6.34308 6.73986 6.88348 7.03751 7.12908 7.55150 7.55747 7.83143 8.00063 8.33726 8.82836 9.42720 10.94295 Molecular weight = 207.13amu Principal moments of inertia in cm(-1) A = 0.040869 B = 0.007934 C = 0.007770 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 684.957862 B = 3528.126876 C = 3602.508096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 C -0.182 4.182 3 C -0.013 4.013 4 N -0.432 5.432 5 C 0.113 3.887 6 C -0.022 4.022 7 C -0.528 4.528 8 H 0.075 0.925 9 C 0.073 3.927 10 N -0.897 5.897 11 Si 0.879 3.121 12 H -0.276 1.276 13 H -0.285 1.285 14 H -0.265 1.265 15 C 0.020 3.980 16 C -0.086 4.086 17 C -0.183 4.183 18 C -0.069 4.069 19 H 0.053 0.947 20 H 0.054 0.946 21 H 0.053 0.947 22 H 0.154 0.846 23 H 0.082 0.918 24 H 0.081 0.919 25 H 0.023 0.977 26 H 0.018 0.982 27 H 0.266 0.734 28 H 0.064 0.936 29 H 0.072 0.928 30 H 0.070 0.930 31 H 0.052 0.948 32 H 0.054 0.946 33 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.164 -9.258 4.573 15.207 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.188 4.188 3 C -0.144 4.144 4 N -0.105 5.105 5 C -0.008 4.008 6 C -0.060 4.060 7 C -0.566 4.566 8 H 0.093 0.907 9 C -0.129 4.129 10 N -0.535 5.535 11 Si 0.706 3.294 12 H -0.201 1.201 13 H -0.211 1.211 14 H -0.190 1.190 15 C -0.093 4.093 16 C -0.143 4.143 17 C -0.189 4.189 18 C -0.127 4.127 19 H 0.071 0.929 20 H 0.073 0.927 21 H 0.072 0.928 22 H 0.172 0.828 23 H 0.101 0.899 24 H 0.099 0.901 25 H 0.041 0.959 26 H 0.036 0.964 27 H 0.075 0.925 28 H 0.083 0.917 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.070 0.930 32 H 0.073 0.927 33 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -10.691 -8.928 4.465 14.626 hybrid contribution -0.166 -0.010 -0.972 0.987 sum -10.857 -8.938 3.493 14.490 Atomic orbital electron populations 1.20000 0.91008 1.01062 1.00688 1.19233 0.94819 0.92302 1.12467 1.21526 0.82780 0.98726 1.11359 1.44401 1.06620 1.05604 1.53914 1.22057 0.84431 0.92965 1.01310 1.19901 0.97082 0.97798 0.91186 1.20902 1.10506 1.29906 0.95325 0.90688 1.24952 0.94489 0.94364 0.99126 1.69895 1.20109 1.35955 1.27521 0.86789 0.78785 0.80289 0.83571 1.20131 1.21103 1.18971 1.20094 0.95912 0.83147 1.10158 1.20297 0.94085 0.98008 1.01934 1.19033 0.91632 0.94826 1.13430 1.20010 1.00290 0.91877 1.00503 0.92852 0.92679 0.92834 0.82820 0.89927 0.90091 0.95890 0.96392 0.92452 0.91728 0.90929 0.91107 0.92953 0.92716 0.92775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.91 10.13 36.00 0.36 -0.54 16 2 C -0.18 -3.00 6.14 -104.82 -0.64 -3.65 16 3 C -0.01 -0.22 11.34 -16.75 -0.19 -0.41 16 4 N -0.43 -8.15 2.75 -112.54 -0.31 -8.46 16 5 C 0.11 2.23 5.57 -4.04 -0.02 2.21 16 6 C -0.02 -0.51 4.36 -27.89 -0.12 -0.64 16 7 C -0.53 -14.61 9.66 -34.44 -0.33 -14.94 16 8 H 0.08 2.19 7.99 -52.48 -0.42 1.77 16 9 C 0.07 2.10 5.47 -17.82 -0.10 2.00 16 10 N -0.90 -27.08 13.96 55.43 0.77 -26.31 16 11 Si 0.88 21.69 27.47 -169.99 -4.67 17.02 16 12 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 13 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 14 H -0.27 -6.43 6.54 56.52 0.37 -6.06 16 15 C 0.02 0.36 6.89 -81.79 -0.56 -0.21 16 16 C -0.09 -1.30 9.72 36.00 0.35 -0.95 16 17 C -0.18 -3.05 6.14 -104.82 -0.64 -3.70 16 18 C -0.07 -0.91 9.91 36.00 0.36 -0.56 16 19 H 0.05 0.66 8.14 -51.93 -0.42 0.23 16 20 H 0.05 0.64 8.04 -51.93 -0.42 0.23 16 21 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 22 H 0.15 2.38 8.06 -52.49 -0.42 1.96 16 23 H 0.08 1.56 8.12 -51.93 -0.42 1.14 16 24 H 0.08 1.55 7.89 -51.93 -0.41 1.14 16 25 H 0.02 0.56 6.72 -51.93 -0.35 0.21 16 26 H 0.02 0.43 7.57 -51.93 -0.39 0.04 16 27 H 0.27 7.51 8.31 -40.82 -0.34 7.17 16 28 H 0.06 0.87 8.14 -51.93 -0.42 0.45 16 29 H 0.07 0.96 7.14 -51.93 -0.37 0.59 16 30 H 0.07 1.17 7.34 -51.93 -0.38 0.79 16 31 H 0.05 0.63 8.14 -51.93 -0.42 0.20 16 32 H 0.05 0.66 8.04 -51.93 -0.42 0.24 16 33 H 0.05 0.66 7.14 -51.93 -0.37 0.29 16 LS Contribution 275.17 15.07 4.15 4.15 Total: -1.00 -30.41 275.17 -6.83 -37.24 By element: Atomic # 1 Polarization: 2.97 SS G_CDS: -5.23 Total: -2.26 kcal Atomic # 6 Polarization: -19.84 SS G_CDS: -1.54 Total: -21.39 kcal Atomic # 7 Polarization: -35.23 SS G_CDS: 0.46 Total: -34.76 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -4.67 Total: 17.02 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -30.41 -6.83 -37.24 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068944340.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.613 kcal (2) G-P(sol) polarization free energy of solvation -30.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.200 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.244 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.370 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds