Wall clock time and date at job start Mon Mar 30 2020 02:42:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 110.33438 * 2 1 4 4 O 1.44423 * 110.37312 * 122.37332 * 2 1 3 5 5 C 1.44420 * 105.27904 * 159.33916 * 4 2 1 6 6 H 1.09002 * 110.37019 * 78.31740 * 5 4 2 7 7 C 1.52998 * 110.47298 * 200.60799 * 5 4 2 8 8 C 1.54482 * 104.80481 * 319.49070 * 5 4 2 9 9 H 1.09000 * 110.51013 * 265.33225 * 8 5 4 10 10 C 1.53002 * 110.63050 * 142.67727 * 8 5 4 11 11 C 1.54482 * 110.37277 * 237.75126 * 2 1 3 12 12 H 1.09005 * 110.51290 * 335.83743 * 11 2 1 13 13 C 1.50700 * 110.51182 * 98.54624 * 11 2 1 14 14 O 1.21433 * 119.99788 * 27.65409 * 13 11 2 15 15 C 1.41019 * 120.00331 * 207.65459 * 13 11 2 16 16 H 1.08008 * 119.99822 * 6.58343 * 15 13 11 17 17 C 1.40457 * 120.00305 * 186.58921 * 15 13 11 18 18 N 1.30525 * 120.00129 * 353.32045 * 17 15 13 19 19 Si 1.86806 * 120.00093 * 173.32102 * 17 15 13 20 20 H 1.48495 * 109.46969 * 94.97953 * 19 17 15 21 21 H 1.48505 * 109.46878 * 214.97766 * 19 17 15 22 22 H 1.48493 * 109.47053 * 334.97546 * 19 17 15 23 23 H 1.08994 * 109.47631 * 182.24580 * 1 2 3 24 24 H 1.09002 * 109.47275 * 62.24636 * 1 2 3 25 25 H 1.09002 * 109.46834 * 302.25029 * 1 2 3 26 26 H 1.08994 * 109.47772 * 175.43742 * 7 5 4 27 27 H 1.09004 * 109.47176 * 295.44504 * 7 5 4 28 28 H 1.09007 * 109.46516 * 55.43429 * 7 5 4 29 29 H 1.08999 * 109.46884 * 306.17542 * 10 8 5 30 30 H 1.09006 * 109.46936 * 66.17268 * 10 8 5 31 31 H 1.08993 * 109.47405 * 186.17285 * 10 8 5 32 32 H 0.96996 * 120.00077 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9087 1.0221 0.0000 4 8 2.0328 -0.7249 1.1435 5 6 3.3872 -1.0881 0.7983 6 1 4.0524 -0.2335 0.9218 7 6 3.8627 -2.2605 1.6587 8 6 3.3177 -1.5050 -0.6876 9 1 3.1954 -2.5845 -0.7760 10 6 4.5709 -1.0458 -1.4355 11 6 2.0678 -0.7727 -1.2248 12 1 1.3275 -1.4903 -1.5789 13 6 2.4482 0.1825 -2.3265 14 8 2.7957 1.3141 -2.0557 15 6 2.4007 -0.2376 -3.6718 16 1 1.9916 -1.2056 -3.9211 17 6 2.8854 0.6027 -4.6876 18 7 3.2586 1.8209 -4.4041 19 14 2.9958 -0.0231 -6.4442 20 1 1.7730 0.3723 -7.1883 21 1 4.1890 0.5644 -7.1049 22 1 3.1133 -1.5034 -6.4358 23 1 -0.3634 -1.0268 0.0403 24 1 -0.3634 0.4786 -0.9094 25 1 -0.3633 0.5484 0.8691 26 1 4.8540 -2.5734 1.3309 27 1 3.9063 -1.9506 2.7029 28 1 3.1663 -3.0927 1.5556 29 1 4.7119 0.0246 -1.2853 30 1 5.4391 -1.5836 -1.0544 31 1 4.4547 -1.2511 -2.4996 32 1 3.5930 2.4014 -5.1057 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000252680920.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:42:42 Heat of formation + Delta-G solvation = -107.140791 kcal Electronic energy + Delta-G solvation = -14958.344579 eV Core-core repulsion = 12497.259834 eV Total energy + Delta-G solvation = -2461.084745 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 212.120 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -39.49001 -36.34768 -33.01439 -32.72758 -31.70230 -28.87898 -27.26636 -25.92149 -22.73626 -21.28401 -20.36933 -18.45886 -16.33060 -15.52320 -15.21037 -14.83463 -14.69900 -13.63259 -13.06524 -12.95889 -12.73521 -12.24665 -12.00692 -11.81802 -11.58820 -11.39628 -11.28517 -11.02979 -10.84338 -10.68135 -10.44095 -10.24062 -10.04318 -9.73257 -9.62582 -9.01087 -8.90459 -7.36545 -6.25400 -4.89416 3.02381 3.12452 3.16027 4.01226 4.19098 4.45015 5.19352 5.23048 5.50512 5.61439 5.68389 5.83097 5.86995 5.99627 6.03430 6.11812 6.15385 6.29840 6.39517 6.46206 6.62003 6.63494 6.74468 6.80814 6.87298 7.01282 7.21324 7.25143 7.59013 8.09084 8.81778 8.88787 10.32851 10.56263 Molecular weight = 212.12amu Principal moments of inertia in cm(-1) A = 0.040964 B = 0.010154 C = 0.009180 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 683.359119 B = 2756.812039 C = 3049.416908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C 0.078 3.922 3 H 0.083 0.917 4 O -0.384 6.384 5 C 0.074 3.926 6 H 0.064 0.936 7 C -0.141 4.141 8 C -0.097 4.097 9 H 0.070 0.930 10 C -0.145 4.145 11 C -0.156 4.156 12 H 0.074 0.926 13 C 0.383 3.617 14 O -0.543 6.543 15 C -0.532 4.532 16 H 0.067 0.933 17 C 0.085 3.915 18 N -0.739 5.739 19 Si 0.899 3.101 20 H -0.270 1.270 21 H -0.277 1.277 22 H -0.261 1.261 23 H 0.054 0.946 24 H 0.070 0.930 25 H 0.052 0.948 26 H 0.065 0.935 27 H 0.055 0.945 28 H 0.059 0.941 29 H 0.065 0.935 30 H 0.037 0.963 31 H 0.074 0.926 32 H 0.272 0.728 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.110 -6.061 4.400 7.491 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C 0.021 3.979 3 H 0.101 0.899 4 O -0.304 6.304 5 C 0.017 3.983 6 H 0.082 0.918 7 C -0.199 4.199 8 C -0.116 4.116 9 H 0.089 0.911 10 C -0.202 4.202 11 C -0.176 4.176 12 H 0.093 0.907 13 C 0.277 3.723 14 O -0.432 6.432 15 C -0.564 4.564 16 H 0.085 0.915 17 C -0.139 4.139 18 N -0.367 5.367 19 Si 0.723 3.277 20 H -0.196 1.196 21 H -0.202 1.202 22 H -0.185 1.185 23 H 0.073 0.927 24 H 0.089 0.911 25 H 0.071 0.929 26 H 0.084 0.916 27 H 0.075 0.925 28 H 0.078 0.922 29 H 0.084 0.916 30 H 0.056 0.944 31 H 0.093 0.907 32 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 0.225 -5.395 4.724 7.175 hybrid contribution 0.086 -0.482 -1.148 1.248 sum 0.312 -5.877 3.576 6.887 Atomic orbital electron populations 1.21735 0.94263 1.01713 1.01853 1.22962 0.94184 0.96719 0.84004 0.89927 1.88971 1.26971 1.74988 1.39457 1.22997 0.84909 0.96554 0.93876 0.91774 1.21776 1.00895 0.97656 0.99526 1.22271 0.96127 0.99318 0.93840 0.91145 1.21875 0.94792 1.01901 1.01598 1.23186 0.96820 0.99601 0.97961 0.90717 1.19103 0.78632 0.86683 0.87842 1.90389 1.46932 1.20884 1.84982 1.20774 1.39509 1.03163 0.92968 0.91455 1.25983 0.93218 0.94028 1.00626 1.69952 1.27442 1.05422 1.33928 0.86474 0.78513 0.80281 0.82385 1.19569 1.20180 1.18530 0.92654 0.91118 0.92871 0.91560 0.92549 0.92202 0.91572 0.94413 0.90671 0.91684 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.53 9.52 37.16 0.35 -2.18 16 2 C 0.08 1.67 3.42 -25.96 -0.09 1.58 16 3 H 0.08 1.98 6.87 -51.93 -0.36 1.63 16 4 O -0.38 -7.81 11.04 -35.23 -0.39 -8.20 16 5 C 0.07 1.37 3.47 -25.95 -0.09 1.28 16 6 H 0.06 1.23 7.82 -51.93 -0.41 0.83 16 7 C -0.14 -2.05 9.52 37.16 0.35 -1.69 16 8 C -0.10 -1.91 3.25 -89.05 -0.29 -2.20 16 9 H 0.07 1.27 7.87 -51.93 -0.41 0.86 16 10 C -0.14 -2.96 7.99 37.16 0.30 -2.66 16 11 C -0.16 -3.49 2.94 -90.20 -0.27 -3.75 16 12 H 0.07 1.61 7.85 -51.93 -0.41 1.20 16 13 C 0.38 10.27 4.10 -33.25 -0.14 10.13 16 14 O -0.54 -16.43 13.55 5.42 0.07 -16.35 16 15 C -0.53 -14.33 8.30 -37.69 -0.31 -14.64 16 16 H 0.07 1.70 7.86 -52.48 -0.41 1.29 16 17 C 0.08 2.24 5.50 -17.27 -0.09 2.14 16 18 N -0.74 -20.87 11.75 55.57 0.65 -20.22 16 19 Si 0.90 19.18 29.57 -169.99 -5.03 14.15 16 20 H -0.27 -5.67 7.11 56.52 0.40 -5.26 16 21 H -0.28 -5.77 7.11 56.52 0.40 -5.37 16 22 H -0.26 -5.43 7.11 56.52 0.40 -5.03 16 23 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 24 H 0.07 1.31 8.14 -51.93 -0.42 0.89 16 25 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 26 H 0.07 0.84 8.14 -51.93 -0.42 0.42 16 27 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 28 H 0.06 0.84 8.14 -51.93 -0.42 0.41 16 29 H 0.07 1.54 7.04 -51.93 -0.37 1.17 16 30 H 0.04 0.64 8.14 -51.93 -0.42 0.21 16 31 H 0.07 1.67 6.82 -51.93 -0.35 1.31 16 32 H 0.27 6.95 8.29 -40.82 -0.34 6.61 16 LS Contribution 262.68 15.07 3.96 3.96 Total: -1.00 -30.38 262.68 -5.81 -36.19 By element: Atomic # 1 Polarization: 7.26 SS G_CDS: -4.81 Total: 2.45 kcal Atomic # 6 Polarization: -11.71 SS G_CDS: -0.27 Total: -11.98 kcal Atomic # 7 Polarization: -20.87 SS G_CDS: 0.65 Total: -20.22 kcal Atomic # 8 Polarization: -24.23 SS G_CDS: -0.32 Total: -24.55 kcal Atomic # 14 Polarization: 19.18 SS G_CDS: -5.03 Total: 14.15 kcal Total LS contribution 3.96 Total: 3.96 kcal Total: -30.38 -5.81 -36.19 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000252680920.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.951 kcal (2) G-P(sol) polarization free energy of solvation -30.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.332 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.809 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.141 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds