Wall clock time and date at job start Mon Mar 30 2020 02:50:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34224 * 117.00077 * 2 1 4 4 O 1.20833 * 120.00103 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00302 * 180.02562 * 3 2 1 6 6 H 1.08995 * 109.47473 * 59.99636 * 5 3 2 7 7 C 1.53002 * 109.46941 * 299.99657 * 5 3 2 8 8 C 1.52997 * 109.47493 * 179.97438 * 7 5 3 9 9 C 1.53006 * 109.46769 * 59.99990 * 8 7 5 10 10 C 1.52998 * 109.47286 * 299.99910 * 9 8 7 11 11 H 1.08995 * 109.47244 * 179.97438 * 10 9 8 12 12 C 1.50696 * 109.47393 * 300.00445 * 10 9 8 13 13 H 1.07998 * 120.00782 * 119.99638 * 12 10 9 14 14 C 1.37885 * 119.99832 * 299.99719 * 12 10 9 15 15 N 1.31511 * 119.99772 * 0.02562 * 14 12 10 16 16 Si 1.86800 * 119.99984 * 179.97438 * 14 12 10 17 17 H 1.48504 * 109.47205 * 0.02562 * 16 14 12 18 18 H 1.48498 * 109.47155 * 120.00305 * 16 14 12 19 19 H 1.48500 * 109.47390 * 240.00346 * 16 14 12 20 20 C 1.52997 * 109.46630 * 60.00179 * 10 9 8 21 21 H 1.09000 * 109.47070 * 300.00162 * 1 2 3 22 22 H 1.09001 * 109.46626 * 60.00180 * 1 2 3 23 23 H 1.09001 * 109.47153 * 179.97438 * 1 2 3 24 24 H 1.09003 * 109.47318 * 300.00255 * 7 5 3 25 25 H 1.09008 * 109.46908 * 59.99812 * 7 5 3 26 26 H 1.09003 * 109.47116 * 300.00464 * 8 7 5 27 27 H 1.09001 * 109.47677 * 179.97438 * 8 7 5 28 28 H 1.09003 * 109.46515 * 179.97438 * 9 8 7 29 29 H 1.09000 * 109.47144 * 60.00813 * 9 8 7 30 30 H 0.97006 * 119.99432 * 180.02562 * 15 14 12 31 31 H 1.09005 * 109.47056 * 179.97438 * 20 10 9 32 32 H 1.09000 * 109.47303 * 60.00510 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9558 0.7809 -0.8907 7 6 4.1139 0.5811 1.2484 8 6 5.6418 0.6606 1.2476 9 6 6.0760 2.1277 1.2473 10 6 5.5286 2.8215 -0.0016 11 1 5.8376 3.8667 -0.0016 12 6 6.0665 2.1382 -1.2324 13 1 5.3866 1.6918 -1.9429 14 6 7.4267 2.0829 -1.4513 15 7 8.2546 2.6260 -0.5858 16 14 8.0935 1.2352 -2.9765 17 1 6.9638 0.7092 -3.7843 18 1 8.8684 2.2099 -3.7857 19 1 8.9783 0.1131 -2.5724 20 6 4.0007 2.7419 -0.0007 21 1 -0.3633 0.5139 0.8900 22 1 -0.3632 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 3.7244 1.0750 2.1386 25 1 3.8048 -0.4642 1.2483 26 1 6.0308 0.1664 0.3573 27 1 6.0318 0.1668 2.1376 28 1 7.1646 2.1843 1.2472 29 1 5.6870 2.6220 2.1376 30 1 9.2115 2.5874 -0.7401 31 1 3.6106 3.2365 -0.8903 32 1 3.6116 3.2362 0.8894 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259945053.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:50:59 Heat of formation + Delta-G solvation = -113.023705 kcal Electronic energy + Delta-G solvation = -14738.843458 eV Core-core repulsion = 12277.503611 eV Total energy + Delta-G solvation = -2461.339847 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 212.120 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -40.23820 -37.52936 -35.99535 -32.69553 -30.13292 -29.77049 -27.41235 -24.89498 -23.07536 -21.30562 -20.12339 -18.71473 -17.07156 -16.30338 -16.03125 -15.65298 -14.55214 -14.18950 -13.51135 -13.26151 -12.84422 -12.71533 -12.14735 -11.80403 -11.58685 -11.34858 -11.13290 -10.90315 -10.59374 -10.56100 -10.39877 -10.16393 -9.94145 -9.58185 -9.16661 -8.98391 -8.63948 -8.26937 -5.97469 -4.02749 2.63600 3.10855 3.29484 3.38455 3.41471 4.44216 5.17060 5.20845 5.25918 5.33047 5.52073 5.54293 5.60726 6.01350 6.21226 6.38553 6.42346 6.51406 6.66028 6.71437 6.79552 6.80747 6.97326 7.14040 7.45540 7.55138 7.73554 7.92520 8.14289 8.17984 8.46226 8.99578 9.61014 11.08267 Molecular weight = 212.12amu Principal moments of inertia in cm(-1) A = 0.039459 B = 0.009249 C = 0.008613 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 709.430188 B = 3026.700527 C = 3250.131398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.362 6.362 3 C 0.462 3.538 4 O -0.516 6.516 5 C -0.069 4.069 6 H 0.117 0.883 7 C -0.100 4.100 8 C -0.102 4.102 9 C -0.112 4.112 10 C 0.044 3.956 11 H 0.031 0.969 12 C -0.506 4.506 13 H 0.055 0.945 14 C 0.063 3.937 15 N -0.889 5.889 16 Si 0.884 3.116 17 H -0.274 1.274 18 H -0.285 1.285 19 H -0.285 1.285 20 C -0.087 4.087 21 H 0.058 0.942 22 H 0.058 0.942 23 H 0.095 0.905 24 H 0.051 0.949 25 H 0.058 0.942 26 H 0.074 0.926 27 H 0.039 0.961 28 H 0.092 0.908 29 H 0.015 0.985 30 H 0.259 0.741 31 H 0.054 0.946 32 H 0.043 0.957 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.086 -5.588 2.459 10.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.279 6.279 3 C 0.306 3.694 4 O -0.404 6.404 5 C -0.088 4.088 6 H 0.134 0.866 7 C -0.137 4.137 8 C -0.139 4.139 9 C -0.150 4.150 10 C 0.026 3.974 11 H 0.049 0.951 12 C -0.544 4.544 13 H 0.074 0.926 14 C -0.138 4.138 15 N -0.528 5.528 16 Si 0.712 3.288 17 H -0.198 1.198 18 H -0.212 1.212 19 H -0.211 1.211 20 C -0.125 4.125 21 H 0.077 0.923 22 H 0.077 0.923 23 H 0.114 0.886 24 H 0.070 0.930 25 H 0.077 0.923 26 H 0.092 0.908 27 H 0.057 0.943 28 H 0.111 0.889 29 H 0.034 0.966 30 H 0.069 0.931 31 H 0.073 0.927 32 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges -9.129 -5.265 2.487 10.828 hybrid contribution 0.130 -0.411 -0.879 0.979 sum -9.000 -5.676 1.608 10.761 Atomic orbital electron populations 1.23163 0.77726 1.03027 1.02132 1.86571 1.22424 1.34502 1.84383 1.24712 0.93001 0.80669 0.71040 1.90597 1.67482 1.36488 1.45810 1.21219 0.83518 1.01494 1.02519 0.86553 1.21454 0.98304 0.98866 0.95124 1.21386 0.92367 0.99347 1.00813 1.21563 1.03948 0.93222 0.96255 1.18723 0.87741 0.96811 0.94146 0.95079 1.21182 0.91453 1.35806 1.06004 0.92645 1.24932 0.97171 0.95552 0.96171 1.69881 1.02670 1.45046 1.35196 0.86657 0.79081 0.79405 0.83609 1.19821 1.21150 1.21084 1.21505 0.99633 0.91026 1.00344 0.92333 0.92299 0.88631 0.92993 0.92335 0.90760 0.94250 0.88941 0.96578 0.93133 0.92735 0.93806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.40 10.56 101.05 1.07 1.47 16 2 O -0.36 -5.79 10.47 -39.24 -0.41 -6.20 16 3 C 0.46 8.53 7.26 36.00 0.26 8.79 16 4 O -0.52 -10.57 15.73 -18.76 -0.30 -10.86 16 5 C -0.07 -1.33 2.40 -91.77 -0.22 -1.55 16 6 H 0.12 2.33 6.62 -51.93 -0.34 1.98 16 7 C -0.10 -1.79 5.13 -26.73 -0.14 -1.92 16 8 C -0.10 -2.04 5.70 -26.73 -0.15 -2.19 16 9 C -0.11 -2.55 5.23 -26.73 -0.14 -2.69 16 10 C 0.04 1.07 2.59 -91.78 -0.24 0.83 16 11 H 0.03 0.83 8.14 -51.93 -0.42 0.41 16 12 C -0.51 -13.14 6.61 -34.44 -0.23 -13.36 16 13 H 0.06 1.42 6.71 -52.49 -0.35 1.07 16 14 C 0.06 1.67 5.30 -17.82 -0.09 1.58 16 15 N -0.89 -24.62 11.32 55.43 0.63 -24.00 16 16 Si 0.88 20.70 29.54 -169.99 -5.02 15.68 16 17 H -0.27 -6.33 7.11 56.52 0.40 -5.92 16 18 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 19 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 20 C -0.09 -1.87 3.98 -26.73 -0.11 -1.98 16 21 H 0.06 0.68 8.13 -51.93 -0.42 0.26 16 22 H 0.06 0.69 8.13 -51.93 -0.42 0.27 16 23 H 0.10 0.82 8.14 -51.93 -0.42 0.40 16 24 H 0.05 0.90 8.14 -51.93 -0.42 0.47 16 25 H 0.06 0.94 8.11 -51.92 -0.42 0.52 16 26 H 0.07 1.61 7.22 -51.93 -0.37 1.24 16 27 H 0.04 0.71 8.14 -51.93 -0.42 0.29 16 28 H 0.09 2.36 6.07 -51.93 -0.32 2.05 16 29 H 0.02 0.34 8.14 -51.93 -0.42 -0.09 16 30 H 0.26 6.87 8.31 -40.82 -0.34 6.53 16 31 H 0.05 1.20 8.10 -51.93 -0.42 0.78 16 32 H 0.04 0.91 8.10 -51.93 -0.42 0.49 16 LS Contribution 259.36 15.07 3.91 3.91 Total: -1.00 -28.41 259.36 -5.92 -34.33 By element: Atomic # 1 Polarization: 2.91 SS G_CDS: -4.74 Total: -1.83 kcal Atomic # 6 Polarization: -11.04 SS G_CDS: 0.01 Total: -11.03 kcal Atomic # 7 Polarization: -24.62 SS G_CDS: 0.63 Total: -24.00 kcal Atomic # 8 Polarization: -16.36 SS G_CDS: -0.71 Total: -17.06 kcal Atomic # 14 Polarization: 20.70 SS G_CDS: -5.02 Total: 15.68 kcal Total LS contribution 3.91 Total: 3.91 kcal Total: -28.41 -5.92 -34.33 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259945053.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.697 kcal (2) G-P(sol) polarization free energy of solvation -28.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.103 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.327 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.024 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds