Wall clock time and date at job start Mon Mar 30 2020 02:48:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.45195 * 109.47345 * 2 1 4 4 C 1.34223 * 117.00159 * 179.97438 * 3 2 1 5 5 O 1.20827 * 120.00222 * 359.97438 * 4 3 2 6 6 C 1.50702 * 119.99882 * 179.97438 * 4 3 2 7 7 H 1.08993 * 110.81986 * 298.11372 * 6 4 3 8 8 C 1.54894 * 110.75529 * 61.45713 * 6 4 3 9 9 C 1.54266 * 104.31305 * 156.31998 * 8 6 4 10 10 C 1.53869 * 106.60031 * 336.32486 * 9 8 6 11 11 H 1.08999 * 110.04012 * 119.28327 * 10 9 8 12 12 C 1.50701 * 110.03004 * 240.66866 * 10 9 8 13 13 H 1.07996 * 120.00563 * 118.54459 * 12 10 9 14 14 C 1.37883 * 120.00158 * 298.54124 * 12 10 9 15 15 N 1.31522 * 119.99345 * 0.02562 * 14 12 10 16 16 Si 1.86794 * 120.00533 * 179.97438 * 14 12 10 17 17 H 1.48506 * 109.47156 * 60.00160 * 16 14 12 18 18 H 1.48496 * 109.47307 * 180.02562 * 16 14 12 19 19 H 1.48496 * 109.47100 * 300.00313 * 16 14 12 20 20 C 1.54266 * 106.59800 * 359.97438 * 10 9 8 21 21 H 1.09001 * 109.47135 * 180.02562 * 1 2 3 22 22 H 1.08997 * 109.47286 * 300.00247 * 1 2 3 23 23 H 1.09005 * 109.47038 * 60.00282 * 1 2 3 24 24 H 1.09004 * 109.47000 * 239.99554 * 2 1 3 25 25 H 1.09002 * 109.46933 * 120.00251 * 2 1 3 26 26 H 1.09002 * 110.48891 * 37.57424 * 8 6 4 27 27 H 1.08998 * 110.48494 * 275.06511 * 8 6 4 28 28 H 1.09001 * 110.03084 * 95.60669 * 9 8 6 29 29 H 1.08995 * 110.03255 * 217.03136 * 9 8 6 30 30 H 0.96997 * 119.99897 * 180.02562 * 15 14 12 31 31 H 1.09005 * 110.48526 * 142.29451 * 20 10 9 32 32 H 1.09006 * 110.48581 * 264.93644 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5447 0.0005 5 8 4.0807 0.5865 0.0015 6 6 3.9207 2.9373 0.0000 7 1 3.6256 3.4783 -0.8990 8 6 3.4903 3.7098 1.2717 9 6 4.5752 4.7927 1.4456 10 6 5.8317 4.2761 0.7232 11 1 6.1105 4.9611 -0.0775 12 6 6.9691 4.1364 1.7019 13 1 7.4134 3.1681 1.8790 14 6 7.4426 5.2448 2.3715 15 7 6.9012 6.4240 2.1562 16 14 8.8519 5.0717 3.5852 17 1 10.0472 4.5390 2.8831 18 1 9.1702 6.4003 4.1670 19 1 8.4584 4.1379 4.6707 20 6 5.4668 2.8970 0.1361 21 1 -0.3633 -1.0277 0.0005 22 1 -0.3634 0.5138 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 1.8933 -0.5139 -0.8900 25 1 1.8933 -0.5139 0.8900 26 1 3.4736 3.0445 2.1349 27 1 2.5126 4.1692 1.1264 28 1 4.2441 5.7286 0.9955 29 1 4.7878 4.9417 2.5042 30 1 7.2345 7.2039 2.6269 31 1 5.9317 2.7631 -0.8408 32 1 5.7695 2.1006 0.8161 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260369041.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:48:07 Heat of formation + Delta-G solvation = -113.473262 kcal Electronic energy + Delta-G solvation = -14207.657593 eV Core-core repulsion = 11746.298252 eV Total energy + Delta-G solvation = -2461.359341 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 212.120 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -40.22949 -37.19897 -36.02153 -32.57104 -31.66147 -28.66953 -27.85880 -24.54908 -23.21187 -21.63747 -19.63902 -18.84795 -17.39863 -16.39189 -16.36081 -15.49805 -14.79741 -14.46721 -13.77960 -13.46540 -12.89493 -12.55902 -12.40087 -11.94958 -11.66519 -11.61106 -11.09121 -10.90809 -10.57101 -10.52252 -10.41909 -10.34073 -9.95268 -9.76418 -9.61691 -9.22889 -8.68589 -8.33653 -5.98218 -4.00886 2.59512 2.96639 3.35117 3.39292 3.42844 4.47306 4.88945 4.91672 5.05729 5.22227 5.27335 5.41889 5.54112 5.62305 5.71178 5.84379 5.94083 6.28378 6.46455 6.51003 6.64401 6.70844 6.81304 6.99955 7.23653 7.35068 7.73819 7.93236 8.00657 8.13320 8.49548 9.02091 9.62817 11.11106 Molecular weight = 212.12amu Principal moments of inertia in cm(-1) A = 0.060271 B = 0.006634 C = 0.006398 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 464.458899 B = 4219.908694 C = 4375.011358 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.058 3.942 3 O -0.360 6.360 4 C 0.470 3.530 5 O -0.512 6.512 6 C -0.092 4.092 7 H 0.104 0.896 8 C -0.110 4.110 9 C -0.092 4.092 10 C 0.044 3.956 11 H 0.030 0.970 12 C -0.513 4.513 13 H 0.055 0.945 14 C 0.061 3.939 15 N -0.890 5.890 16 Si 0.889 3.111 17 H -0.277 1.277 18 H -0.288 1.288 19 H -0.278 1.278 20 C -0.095 4.095 21 H 0.075 0.925 22 H 0.066 0.934 23 H 0.065 0.935 24 H 0.065 0.935 25 H 0.067 0.933 26 H 0.057 0.943 27 H 0.058 0.942 28 H 0.043 0.957 29 H 0.068 0.932 30 H 0.260 0.740 31 H 0.051 0.949 32 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.965 -7.624 -3.598 13.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.016 4.016 3 O -0.278 6.278 4 C 0.314 3.686 5 O -0.399 6.399 6 C -0.111 4.111 7 H 0.122 0.878 8 C -0.147 4.147 9 C -0.130 4.130 10 C 0.026 3.974 11 H 0.048 0.952 12 C -0.551 4.551 13 H 0.074 0.926 14 C -0.141 4.141 15 N -0.529 5.529 16 Si 0.717 3.283 17 H -0.203 1.203 18 H -0.214 1.214 19 H -0.203 1.203 20 C -0.133 4.133 21 H 0.094 0.906 22 H 0.085 0.915 23 H 0.084 0.916 24 H 0.084 0.916 25 H 0.085 0.915 26 H 0.076 0.924 27 H 0.077 0.923 28 H 0.062 0.938 29 H 0.087 0.913 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -10.748 -7.743 -3.535 13.710 hybrid contribution 0.755 -0.234 0.677 1.041 sum -9.993 -7.977 -2.858 13.102 Atomic orbital electron populations 1.21786 0.92970 1.02579 1.03458 1.22941 0.95129 0.81232 1.02293 1.86557 1.25479 1.31443 1.84311 1.24198 0.79807 0.93309 0.71289 1.90616 1.60394 1.43391 1.45540 1.22341 0.98863 0.87989 1.01863 0.87758 1.22422 0.99543 0.98345 0.94434 1.22086 0.93757 0.94629 1.02569 1.19284 0.93305 0.89814 0.95041 0.95177 1.21219 1.16434 0.94053 1.23366 0.92639 1.24972 0.96742 0.95369 0.96974 1.69973 1.41682 0.98734 1.42501 0.86700 0.82928 0.77057 0.81568 1.20296 1.21364 1.20324 1.22570 0.88614 1.01570 1.00559 0.90604 0.91493 0.91601 0.91614 0.91505 0.92377 0.92299 0.93820 0.91297 0.93043 0.92993 0.91206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.35 10.29 37.16 0.38 -0.97 16 2 C 0.06 0.72 6.19 37.16 0.23 0.95 16 3 O -0.36 -5.64 10.20 -39.24 -0.40 -6.04 16 4 C 0.47 8.51 7.26 36.01 0.26 8.77 16 5 O -0.51 -10.47 15.56 -18.75 -0.29 -10.76 16 6 C -0.09 -1.68 3.42 -89.57 -0.31 -1.99 16 7 H 0.10 1.71 8.14 -51.93 -0.42 1.28 16 8 C -0.11 -2.07 6.24 -25.07 -0.16 -2.22 16 9 C -0.09 -2.11 5.56 -25.62 -0.14 -2.25 16 10 C 0.04 1.09 2.84 -90.66 -0.26 0.83 16 11 H 0.03 0.80 8.14 -51.93 -0.42 0.37 16 12 C -0.51 -14.15 8.34 -34.44 -0.29 -14.44 16 13 H 0.06 1.53 7.55 -52.49 -0.40 1.14 16 14 C 0.06 1.69 5.07 -17.81 -0.09 1.60 16 15 N -0.89 -25.44 12.33 55.43 0.68 -24.75 16 16 Si 0.89 21.44 29.54 -169.99 -5.02 16.41 16 17 H -0.28 -6.64 7.11 56.52 0.40 -6.23 16 18 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 19 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 20 C -0.10 -2.06 5.39 -24.87 -0.13 -2.19 16 21 H 0.08 0.51 8.14 -51.93 -0.42 0.09 16 22 H 0.07 0.60 8.14 -51.93 -0.42 0.17 16 23 H 0.06 0.56 8.14 -51.93 -0.42 0.14 16 24 H 0.07 0.79 8.14 -51.93 -0.42 0.36 16 25 H 0.07 0.83 8.13 -51.93 -0.42 0.41 16 26 H 0.06 1.11 8.04 -51.93 -0.42 0.69 16 27 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 28 H 0.04 0.99 8.14 -51.93 -0.42 0.57 16 29 H 0.07 1.75 7.17 -51.93 -0.37 1.38 16 30 H 0.26 7.12 8.31 -40.82 -0.34 6.78 16 31 H 0.05 1.06 8.14 -51.93 -0.42 0.63 16 32 H 0.07 1.61 7.09 -51.93 -0.37 1.24 16 LS Contribution 269.12 15.07 4.06 4.06 Total: -1.00 -29.73 269.12 -6.39 -36.12 By element: Atomic # 1 Polarization: 1.79 SS G_CDS: -4.92 Total: -3.13 kcal Atomic # 6 Polarization: -11.41 SS G_CDS: -0.50 Total: -11.91 kcal Atomic # 7 Polarization: -25.44 SS G_CDS: 0.68 Total: -24.75 kcal Atomic # 8 Polarization: -16.11 SS G_CDS: -0.69 Total: -16.80 kcal Atomic # 14 Polarization: 21.44 SS G_CDS: -5.02 Total: 16.41 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -29.73 -6.39 -36.12 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260369041.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.349 kcal (2) G-P(sol) polarization free energy of solvation -29.734 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.082 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.125 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.473 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds