Wall clock time and date at job start Mon Mar 30 2020 02:36:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46496 * 109.47240 * 2 1 4 4 C 1.45650 * 117.70602 * 90.00153 * 3 2 1 5 5 C 1.52989 * 110.77430 * 158.09766 * 4 3 2 6 6 H 1.09004 * 109.72101 * 287.05437 * 5 4 3 7 7 C 1.52994 * 109.75458 * 166.41908 * 5 4 3 8 8 N 1.47269 * 108.18640 * 46.72475 * 5 4 3 9 9 C 1.36940 * 121.35179 * 118.46961 * 8 5 4 10 10 H 1.08003 * 119.99921 * 333.79868 * 9 8 5 11 11 C 1.38815 * 119.99959 * 153.79557 * 9 8 5 12 12 N 1.31619 * 119.99825 * 335.51987 * 11 9 8 13 13 Si 1.86792 * 120.00072 * 155.52235 * 11 9 8 14 14 H 1.48501 * 109.47429 * 179.97438 * 13 11 9 15 15 H 1.48497 * 109.47297 * 300.00000 * 13 11 9 16 16 H 1.48498 * 109.47175 * 60.00103 * 13 11 9 17 17 C 1.47047 * 117.29426 * 298.74647 * 8 5 4 18 18 C 1.33384 * 117.70546 * 269.97923 * 3 2 1 19 19 O 1.21280 * 118.48766 * 4.32023 * 18 3 2 20 20 H 1.08998 * 109.47406 * 180.02562 * 1 2 3 21 21 H 1.09000 * 109.46964 * 299.99847 * 1 2 3 22 22 H 1.09000 * 109.47098 * 59.99724 * 1 2 3 23 23 H 1.09000 * 109.46964 * 240.00153 * 2 1 3 24 24 H 1.09000 * 109.47098 * 120.00276 * 2 1 3 25 25 H 1.08999 * 109.21404 * 37.76605 * 4 3 2 26 26 H 1.08998 * 109.18206 * 278.41079 * 4 3 2 27 27 H 1.09001 * 109.47480 * 301.24827 * 7 5 4 28 28 H 1.08997 * 109.47157 * 61.25193 * 7 5 4 29 29 H 1.09002 * 109.47082 * 181.24934 * 7 5 4 30 30 H 0.97008 * 120.00158 * 354.13463 * 12 11 9 31 31 H 1.09001 * 109.56759 * 162.31064 * 17 8 5 32 32 H 1.09000 * 109.56637 * 282.66272 * 17 8 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.2441 2.0196 1.2895 5 6 3.2230 3.1874 1.1529 6 1 4.2316 2.8054 0.9950 7 6 3.1876 4.0428 2.4208 8 7 2.8119 3.9986 -0.0055 9 6 2.4432 5.3096 0.1376 10 1 2.0423 5.6582 1.0779 11 6 2.5846 6.1904 -0.9259 12 7 3.4714 5.9479 -1.8678 13 14 1.5163 7.7198 -1.0203 14 1 1.8606 8.4895 -2.2428 15 1 0.0864 7.3225 -1.0713 16 1 1.7531 8.5638 0.1783 17 6 2.8076 3.3418 -1.3212 18 6 2.2255 1.9657 -1.1809 19 8 1.9261 1.3587 -2.1873 20 1 -0.3634 -1.0276 0.0005 21 1 -0.3633 0.5138 0.8900 22 1 -0.3633 0.5139 -0.8900 23 1 1.8933 -0.5138 -0.8900 24 1 1.8933 -0.5139 0.8900 25 1 2.6539 1.2875 1.9854 26 1 1.2951 2.3904 1.6766 27 1 2.1752 4.4138 2.5808 28 1 3.4925 3.4388 3.2753 29 1 3.8700 4.8856 2.3097 30 1 4.0840 5.2013 -1.7766 31 1 2.2042 3.9239 -2.0178 32 1 3.8287 3.2663 -1.6949 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261068585.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:36:00 Heat of formation + Delta-G solvation = -13.055437 kcal Electronic energy + Delta-G solvation = -15006.001930 eV Core-core repulsion = 12581.289783 eV Total energy + Delta-G solvation = -2424.712146 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 212.127 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.80444 -36.57756 -35.14066 -32.49933 -30.55265 -29.77924 -26.45549 -25.82800 -23.25222 -22.81722 -20.60755 -18.17433 -16.95987 -16.46189 -15.88527 -15.20900 -14.52977 -13.76424 -13.58632 -13.48055 -13.20472 -12.84518 -12.58056 -12.09949 -11.79723 -11.52475 -11.29887 -10.91392 -10.83130 -10.71195 -10.55532 -10.43523 -10.05425 -9.61223 -9.10242 -8.47938 -8.25986 -7.06744 -6.14657 -3.34262 3.29663 3.45830 3.49816 3.55508 3.68617 4.48374 4.96914 5.09044 5.28042 5.39045 5.48724 5.50660 5.67396 5.76227 5.79502 5.84431 6.02685 6.16095 6.21419 6.26401 6.37844 6.49197 6.66198 6.77380 6.87237 6.99819 7.83163 8.02226 8.40303 8.76533 8.95782 9.71002 10.11626 11.13321 Molecular weight = 212.13amu Principal moments of inertia in cm(-1) A = 0.034689 B = 0.010997 C = 0.009792 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 806.979378 B = 2545.543568 C = 2858.671375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.101 3.899 3 N -0.601 5.601 4 C 0.105 3.895 5 C 0.153 3.847 6 H 0.036 0.964 7 C -0.130 4.130 8 N -0.595 5.595 9 C -0.352 4.352 10 H 0.068 0.932 11 C -0.021 4.021 12 N -0.912 5.912 13 Si 1.065 2.935 14 H -0.284 1.284 15 H -0.292 1.292 16 H -0.292 1.292 17 C 0.143 3.857 18 C 0.507 3.493 19 O -0.572 6.572 20 H 0.058 0.942 21 H 0.052 0.948 22 H 0.059 0.941 23 H 0.079 0.921 24 H 0.068 0.932 25 H 0.062 0.938 26 H 0.058 0.942 27 H 0.059 0.941 28 H 0.043 0.957 29 H 0.066 0.934 30 H 0.269 0.731 31 H 0.106 0.894 32 H 0.057 0.943 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.306 -7.729 7.768 11.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C -0.022 4.022 3 N -0.334 5.334 4 C -0.020 4.020 5 C 0.046 3.954 6 H 0.054 0.946 7 C -0.187 4.187 8 N -0.321 5.321 9 C -0.481 4.481 10 H 0.085 0.915 11 C -0.224 4.224 12 N -0.552 5.552 13 Si 0.895 3.105 14 H -0.210 1.210 15 H -0.220 1.220 16 H -0.219 1.219 17 C 0.015 3.985 18 C 0.296 3.704 19 O -0.451 6.451 20 H 0.077 0.923 21 H 0.071 0.929 22 H 0.079 0.921 23 H 0.097 0.903 24 H 0.086 0.914 25 H 0.080 0.920 26 H 0.077 0.923 27 H 0.078 0.922 28 H 0.062 0.938 29 H 0.085 0.915 30 H 0.080 0.920 31 H 0.124 0.876 32 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -2.828 -6.645 6.306 9.588 hybrid contribution 0.357 -1.387 1.100 1.806 sum -2.471 -8.032 7.406 11.202 Atomic orbital electron populations 1.22064 0.96299 1.01381 1.02379 1.21433 0.94515 0.83971 1.02270 1.47330 1.65605 1.13759 1.06666 1.22063 1.00485 0.95745 0.83697 1.20773 0.94190 0.90535 0.89928 0.94641 1.21689 1.02802 0.99671 0.94582 1.44323 1.77890 1.09081 1.00817 1.19908 1.40914 0.84593 1.02655 0.91451 1.25928 0.99237 1.01810 0.95429 1.70820 1.16431 1.30619 1.37327 0.83519 0.75649 0.75415 0.75954 1.20990 1.21965 1.21860 1.21060 0.99550 0.87333 0.90596 1.21541 0.76953 0.89807 0.82086 1.90607 1.53061 1.65312 1.36162 0.92272 0.92866 0.92144 0.90255 0.91381 0.91984 0.92348 0.92186 0.93772 0.91452 0.92009 0.87628 0.92575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.32 10.23 37.16 0.38 -1.94 16 2 C 0.10 1.56 5.88 -4.04 -0.02 1.53 16 3 N -0.60 -11.25 2.81 -175.04 -0.49 -11.74 16 4 C 0.11 1.77 5.93 -4.51 -0.03 1.74 16 5 C 0.15 2.96 3.56 -67.52 -0.24 2.72 16 6 H 0.04 0.70 8.14 -51.93 -0.42 0.27 16 7 C -0.13 -2.22 8.00 37.15 0.30 -1.92 16 8 N -0.59 -14.30 2.88 -166.37 -0.48 -14.78 16 9 C -0.35 -9.25 8.62 -15.06 -0.13 -9.38 16 10 H 0.07 1.73 6.31 -52.48 -0.33 1.40 16 11 C -0.02 -0.59 4.75 -17.43 -0.08 -0.67 16 12 N -0.91 -26.75 12.61 55.49 0.70 -26.05 16 13 Si 1.07 24.69 29.98 -169.99 -5.10 19.59 16 14 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 15 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 16 H -0.29 -6.41 7.11 56.52 0.40 -6.00 16 17 C 0.14 3.49 4.79 -5.20 -0.02 3.46 16 18 C 0.51 11.41 7.56 -11.91 -0.09 11.32 16 19 O -0.57 -13.99 16.25 5.56 0.09 -13.90 16 20 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 21 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 22 H 0.06 1.02 8.14 -51.93 -0.42 0.59 16 23 H 0.08 1.31 7.23 -51.93 -0.38 0.93 16 24 H 0.07 0.84 7.80 -51.93 -0.41 0.43 16 25 H 0.06 0.84 7.84 -51.93 -0.41 0.43 16 26 H 0.06 0.99 8.07 -51.93 -0.42 0.57 16 27 H 0.06 1.06 7.19 -51.93 -0.37 0.68 16 28 H 0.04 0.60 8.14 -51.93 -0.42 0.17 16 29 H 0.07 1.27 7.87 -51.93 -0.41 0.86 16 30 H 0.27 7.90 6.35 -40.82 -0.26 7.64 16 31 H 0.11 2.88 6.90 -51.93 -0.36 2.53 16 32 H 0.06 1.40 7.37 -51.93 -0.38 1.02 16 LS Contribution 258.80 15.07 3.90 3.90 Total: -1.00 -30.65 258.80 -5.95 -36.60 By element: Atomic # 1 Polarization: 4.15 SS G_CDS: -4.63 Total: -0.48 kcal Atomic # 6 Polarization: 6.80 SS G_CDS: 0.06 Total: 6.86 kcal Atomic # 7 Polarization: -52.30 SS G_CDS: -0.27 Total: -52.57 kcal Atomic # 8 Polarization: -13.99 SS G_CDS: 0.09 Total: -13.90 kcal Atomic # 14 Polarization: 24.69 SS G_CDS: -5.10 Total: 19.59 kcal Total LS contribution 3.90 Total: 3.90 kcal Total: -30.65 -5.95 -36.60 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261068585.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.543 kcal (2) G-P(sol) polarization free energy of solvation -30.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.947 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.598 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds