Wall clock time and date at job start Mon Mar 30 2020 02:50:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.48814 * 110.99880 * 2 1 4 4 C 1.51783 * 105.68319 * 241.43113 * 3 2 1 5 5 H 1.09001 * 108.48703 * 85.55172 * 4 3 2 6 6 O 1.40619 * 120.40037 * 212.21318 * 4 3 2 7 7 C 1.44030 * 111.01301 * 184.13109 * 6 4 3 8 8 C 1.52736 * 112.02014 * 302.83852 * 7 6 4 9 9 N 1.48161 * 110.92868 * 44.56627 * 8 7 6 10 10 C 1.36930 * 122.74007 * 131.34973 * 9 8 7 11 11 H 1.08003 * 120.00417 * 314.23638 * 10 9 8 12 12 C 1.38817 * 119.99818 * 134.23602 * 10 9 8 13 13 N 1.31618 * 119.99919 * 151.61817 * 12 10 9 14 14 Si 1.86806 * 119.99903 * 331.61137 * 12 10 9 15 15 H 1.48498 * 109.46648 * 94.42880 * 14 12 10 16 16 H 1.48504 * 109.47018 * 214.42739 * 14 12 10 17 17 H 1.48493 * 109.47056 * 334.43157 * 14 12 10 18 18 C 1.45747 * 114.51794 * 311.34871 * 9 8 7 19 19 H 1.08997 * 110.96360 * 297.26745 * 18 9 8 20 20 C 1.49179 * 110.99898 * 239.61864 * 2 1 3 21 21 H 1.08997 * 109.46775 * 180.38603 * 1 2 3 22 22 H 1.09004 * 109.46796 * 300.38123 * 1 2 3 23 23 H 1.08993 * 109.47310 * 60.38173 * 1 2 3 24 24 H 1.09004 * 110.20634 * 0.48735 * 3 2 1 25 25 H 1.09002 * 110.20294 * 122.37638 * 3 2 1 26 26 H 1.09000 * 108.97592 * 182.17903 * 7 6 4 27 27 H 1.09001 * 108.96667 * 63.49131 * 7 6 4 28 28 H 1.09001 * 109.18619 * 284.19311 * 8 7 6 29 29 H 1.09003 * 109.14552 * 164.91222 * 8 7 6 30 30 H 0.97001 * 119.99904 * 179.97438 * 13 12 10 31 31 H 1.09003 * 110.64083 * 265.07559 * 20 2 1 32 32 H 1.08996 * 110.64157 * 27.96742 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0023 1.3893 0.0000 4 6 2.8018 1.5219 -1.2834 5 1 2.1208 1.8007 -2.0876 6 8 3.9368 2.3505 -1.3323 7 6 4.4819 2.4017 -2.6645 8 6 4.8393 1.0131 -3.1907 9 7 3.7603 0.0415 -2.8959 10 6 3.2469 -0.8048 -3.8420 11 1 2.9931 -0.4288 -4.8222 12 6 3.0527 -2.1460 -3.5414 13 7 2.1061 -2.8268 -4.1519 14 14 4.1350 -2.9846 -2.2706 15 1 3.4653 -2.9437 -0.9458 16 1 4.3608 -4.3976 -2.6677 17 1 5.4390 -2.2791 -2.1880 18 6 3.2900 0.0601 -1.5165 19 1 4.0884 -0.2176 -0.8285 20 6 2.0036 -0.7044 -1.2015 21 1 -0.3633 -1.0276 0.0069 22 1 -0.3633 0.5198 0.8866 23 1 -0.3633 0.5079 -0.8933 24 1 1.1822 2.1074 0.0087 25 1 2.6486 1.5445 0.8639 26 1 5.3798 3.0196 -2.6565 27 1 3.7477 2.8549 -3.3305 28 1 5.7625 0.6776 -2.7181 29 1 4.9881 1.0669 -4.2692 30 1 1.9706 -3.7641 -3.9421 31 1 2.2231 -1.7467 -0.9699 32 1 1.3003 -0.6364 -2.0313 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307570136.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:50:52 Heat of formation + Delta-G solvation = 8.528813 kcal Electronic energy + Delta-G solvation = -15393.348820 eV Core-core repulsion = 12969.572637 eV Total energy + Delta-G solvation = -2423.776183 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 212.127 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -39.70209 -36.65828 -34.63944 -31.74563 -30.74897 -28.09844 -27.64859 -25.05653 -23.10027 -21.86539 -20.26219 -19.79848 -17.09311 -16.22087 -15.11995 -15.05403 -14.74033 -14.32773 -14.22364 -13.54937 -13.24212 -12.81215 -12.49100 -12.24032 -11.97265 -11.61114 -11.23879 -11.09114 -10.83670 -10.59045 -10.35090 -10.04671 -9.84458 -9.76237 -9.05467 -8.49088 -7.90483 -6.72826 -6.16531 -3.59208 3.31212 3.44064 3.54064 4.03348 4.30340 4.49708 4.98749 5.10843 5.27468 5.53457 5.58345 5.67897 5.75573 5.78515 5.83605 5.93036 6.01610 6.15456 6.17268 6.22453 6.40796 6.50145 6.62328 6.78623 6.86521 7.22361 7.45871 7.66639 7.94769 8.28241 8.83640 9.56684 10.12246 10.98373 Molecular weight = 212.13amu Principal moments of inertia in cm(-1) A = 0.025552 B = 0.017581 C = 0.012430 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1095.522066 B = 1592.214593 C = 2252.069593 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.530 5.530 3 C 0.056 3.944 4 C 0.038 3.962 5 H 0.056 0.944 6 O -0.372 6.372 7 C 0.050 3.950 8 C 0.103 3.897 9 N -0.594 5.594 10 C -0.278 4.278 11 H 0.075 0.925 12 C 0.057 3.943 13 N -0.882 5.882 14 Si 0.855 3.145 15 H -0.270 1.270 16 H -0.296 1.296 17 H -0.271 1.271 18 C 0.132 3.868 19 H 0.051 0.949 20 C 0.041 3.959 21 H 0.068 0.932 22 H 0.063 0.937 23 H 0.027 0.973 24 H 0.059 0.941 25 H 0.081 0.919 26 H 0.087 0.913 27 H 0.045 0.955 28 H 0.028 0.972 29 H 0.073 0.927 30 H 0.266 0.734 31 H 0.087 0.913 32 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.014 7.250 5.850 9.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 N -0.256 5.256 3 C -0.073 4.073 4 C -0.023 4.023 5 H 0.074 0.926 6 O -0.290 6.290 7 C -0.028 4.028 8 C -0.022 4.022 9 N -0.320 5.320 10 C -0.406 4.406 11 H 0.092 0.908 12 C -0.147 4.147 13 N -0.521 5.521 14 Si 0.682 3.318 15 H -0.197 1.197 16 H -0.223 1.223 17 H -0.195 1.195 18 C 0.024 3.976 19 H 0.069 0.931 20 C -0.085 4.085 21 H 0.087 0.913 22 H 0.082 0.918 23 H 0.046 0.954 24 H 0.078 0.922 25 H 0.099 0.901 26 H 0.105 0.895 27 H 0.064 0.936 28 H 0.046 0.954 29 H 0.091 0.909 30 H 0.076 0.924 31 H 0.105 0.895 32 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 0.141 6.900 6.360 9.385 hybrid contribution 0.278 -0.354 -0.360 0.577 sum 0.418 6.545 6.000 8.889 Atomic orbital electron populations 1.22507 0.88083 1.02080 1.00057 1.64598 1.07839 1.12532 1.40652 1.22321 0.97645 0.90039 0.97261 1.23041 0.88460 0.93107 0.97698 0.92645 1.87652 1.43391 1.68332 1.29598 1.23066 0.97981 0.98272 0.83436 1.21798 0.91598 0.89071 0.99724 1.44159 1.39591 1.42199 1.06033 1.18520 1.38199 0.87962 0.95899 0.90761 1.25664 0.96221 0.96149 0.96631 1.69954 1.28293 1.09890 1.43947 0.87272 0.83641 0.78699 0.82169 1.19699 1.22317 1.19533 1.21850 0.94694 0.93178 0.87837 0.93114 1.23066 0.96305 0.98540 0.90577 0.91322 0.91833 0.95402 0.92236 0.90096 0.89476 0.93624 0.95427 0.90903 0.92436 0.89499 0.90701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.34 9.19 60.07 0.55 0.89 16 2 N -0.53 -10.00 5.52 -240.05 -1.32 -11.33 16 3 C 0.06 0.97 6.84 -3.38 -0.02 0.95 16 4 C 0.04 0.76 2.89 -25.81 -0.07 0.69 16 5 H 0.06 1.17 7.94 -51.93 -0.41 0.76 16 6 O -0.37 -7.24 10.88 -34.26 -0.37 -7.61 16 7 C 0.05 0.88 6.80 37.02 0.25 1.13 16 8 C 0.10 2.10 6.66 -3.26 -0.02 2.08 16 9 N -0.59 -14.40 2.34 -163.33 -0.38 -14.79 16 10 C -0.28 -7.63 9.32 -15.06 -0.14 -7.77 16 11 H 0.07 2.19 8.06 -52.48 -0.42 1.77 16 12 C 0.06 1.59 4.27 -17.43 -0.07 1.51 16 13 N -0.88 -25.72 13.97 55.49 0.78 -24.94 16 14 Si 0.85 21.77 25.34 -169.99 -4.31 17.46 16 15 H -0.27 -6.69 5.64 56.52 0.32 -6.37 16 16 H -0.30 -7.58 7.11 56.52 0.40 -7.18 16 17 H -0.27 -7.02 7.11 56.52 0.40 -6.62 16 18 C 0.13 3.01 1.92 -66.84 -0.13 2.88 16 19 H 0.05 1.22 7.90 -51.93 -0.41 0.81 16 20 C 0.04 0.93 4.57 -2.60 -0.01 0.92 16 21 H 0.07 1.05 8.14 -51.93 -0.42 0.63 16 22 H 0.06 0.83 8.14 -51.93 -0.42 0.41 16 23 H 0.03 0.44 8.10 -51.93 -0.42 0.02 16 24 H 0.06 0.91 7.62 -51.93 -0.40 0.51 16 25 H 0.08 1.35 8.14 -51.93 -0.42 0.93 16 26 H 0.09 1.24 8.14 -51.93 -0.42 0.82 16 27 H 0.05 0.78 8.07 -51.93 -0.42 0.36 16 28 H 0.03 0.56 8.14 -51.93 -0.42 0.14 16 29 H 0.07 1.41 8.01 -51.93 -0.42 0.99 16 30 H 0.27 7.36 8.31 -40.82 -0.34 7.02 16 31 H 0.09 2.10 4.75 -51.93 -0.25 1.85 16 32 H 0.07 1.83 7.27 -51.93 -0.38 1.45 16 LS Contribution 247.12 15.07 3.72 3.72 Total: -1.00 -29.51 247.12 -6.41 -35.92 By element: Atomic # 1 Polarization: 3.16 SS G_CDS: -4.85 Total: -1.70 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: 0.33 Total: 3.26 kcal Atomic # 7 Polarization: -50.12 SS G_CDS: -0.93 Total: -51.05 kcal Atomic # 8 Polarization: -7.24 SS G_CDS: -0.37 Total: -7.61 kcal Atomic # 14 Polarization: 21.77 SS G_CDS: -4.31 Total: 17.46 kcal Total LS contribution 3.72 Total: 3.72 kcal Total: -29.51 -6.41 -35.92 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307570136.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.449 kcal (2) G-P(sol) polarization free energy of solvation -29.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.941 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.920 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds