Wall clock time and date at job start Mon Mar 30 2020 02:44:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 N 1.27978 * 119.99644 * 2 1 4 4 O 1.21800 * 120.00055 * 0.02562 * 3 2 1 5 5 C 1.34771 * 117.00113 * 179.97438 * 4 3 2 6 6 H 1.08003 * 119.99768 * 359.97438 * 5 4 3 7 7 C 1.38695 * 120.00336 * 180.02562 * 5 4 3 8 8 N 1.31535 * 119.99669 * 359.97438 * 7 5 4 9 9 Si 1.86805 * 120.00136 * 179.97438 * 7 5 4 10 10 H 1.48499 * 109.46821 * 90.00332 * 9 7 5 11 11 H 1.48502 * 109.46979 * 209.99815 * 9 7 5 12 12 H 1.48499 * 109.46879 * 329.99982 * 9 7 5 13 13 C 1.50699 * 120.00487 * 179.97438 * 2 1 3 14 14 H 1.09001 * 110.53226 * 52.38795 * 13 2 1 15 15 C 1.54883 * 110.48739 * 289.78079 * 13 2 1 16 16 C 1.54968 * 102.77558 * 203.40213 * 15 13 2 17 17 C 1.54265 * 104.15902 * 37.88754 * 16 15 13 18 18 H 1.08995 * 110.03486 * 95.75653 * 17 16 15 19 19 N 1.46905 * 110.02933 * 217.13562 * 17 16 15 20 20 C 1.53875 * 106.64085 * 336.44300 * 17 16 15 21 21 H 1.08999 * 109.46697 * 269.99909 * 1 2 3 22 22 H 1.08994 * 109.46972 * 30.00103 * 1 2 3 23 23 H 1.09001 * 109.46743 * 149.99906 * 1 2 3 24 24 H 0.97012 * 119.99949 * 179.97438 * 8 7 5 25 25 H 1.09010 * 110.75400 * 321.68886 * 15 13 2 26 26 H 1.08994 * 110.76380 * 84.87426 * 15 13 2 27 27 H 1.08997 * 110.47528 * 279.23116 * 16 15 13 28 28 H 1.09000 * 110.52617 * 156.56387 * 16 15 13 29 29 H 1.00901 * 110.99869 * 297.90927 * 19 17 16 30 30 H 1.00896 * 110.99543 * 61.86050 * 19 17 16 31 31 H 1.08996 * 110.03198 * 119.26280 * 20 17 16 32 32 H 1.09000 * 110.03265 * 240.64590 * 20 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.1469 1.1084 0.0000 4 8 1.5378 2.1632 0.0005 5 6 2.2718 3.2935 0.0010 6 1 3.3503 3.2370 0.0014 7 6 1.6421 4.5293 0.0021 8 7 0.3285 4.5980 0.0021 9 14 2.6594 6.0960 0.0035 10 1 2.9289 6.5124 -1.3962 11 1 1.9120 7.1708 0.7044 12 1 3.9459 5.8501 0.7033 13 6 2.2607 -1.3050 0.0006 14 1 1.9123 -1.9480 -0.8077 15 6 2.1065 -2.0194 1.3662 16 6 3.3536 -2.9381 1.4150 17 6 4.4717 -2.0909 0.7732 18 1 5.0498 -1.5872 1.5478 19 7 5.3513 -2.9471 -0.0339 20 6 3.7773 -1.0528 -0.1255 21 1 -0.3633 0.0000 1.0277 22 1 -0.3633 0.8899 -0.5138 23 1 -0.3633 -0.8900 -0.5139 24 1 -0.1120 5.4624 0.0032 25 1 2.1263 -1.2985 2.1836 26 1 1.1889 -2.6069 1.3935 27 1 3.1819 -3.8452 0.8355 28 1 3.6062 -3.1850 2.4461 29 1 5.8061 -3.6414 0.5400 30 1 4.8409 -3.3800 -0.7889 31 1 4.0176 -0.0451 0.2135 32 1 4.0936 -1.1836 -1.1604 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000381989220.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:44:09 Heat of formation + Delta-G solvation = 9.868911 kcal Electronic energy + Delta-G solvation = -14211.963353 eV Core-core repulsion = 11788.245281 eV Total energy + Delta-G solvation = -2423.718072 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 212.127 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -39.93643 -38.28209 -34.20529 -32.49143 -31.14998 -28.29721 -27.64832 -25.82565 -24.60332 -21.08220 -19.92842 -18.95269 -17.99513 -16.21020 -15.49904 -15.12533 -14.71248 -14.51031 -14.31181 -13.47249 -13.21935 -12.90445 -12.17567 -12.11825 -11.79405 -11.58255 -11.04746 -10.90387 -10.76937 -10.60946 -10.50308 -10.37705 -10.21731 -10.14710 -9.00784 -8.57098 -8.04036 -7.57134 -6.36512 -3.96488 3.13559 3.19716 3.25297 3.55720 4.02187 4.62377 4.92226 4.96328 5.09136 5.15008 5.40021 5.67525 5.76780 5.82726 5.92347 5.97673 6.04046 6.17950 6.24789 6.46070 6.49310 6.55435 6.67217 6.71660 6.98005 7.23310 7.30112 7.43185 7.52173 8.09956 8.61700 9.15360 10.49647 10.90219 Molecular weight = 212.13amu Principal moments of inertia in cm(-1) A = 0.042895 B = 0.007281 C = 0.006480 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 652.602623 B = 3844.949066 C = 4319.853789 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.065 4.065 3 N -0.346 5.346 4 O 0.018 5.982 5 C -0.375 4.375 6 H 0.087 0.913 7 C 0.037 3.963 8 N -0.872 5.872 9 Si 0.947 3.053 10 H -0.274 1.274 11 H -0.279 1.279 12 H -0.268 1.268 13 C -0.004 4.004 14 H 0.069 0.931 15 C -0.111 4.111 16 C -0.157 4.157 17 C 0.085 3.915 18 H 0.079 0.921 19 N -0.844 5.844 20 C -0.112 4.112 21 H 0.049 0.951 22 H 0.064 0.936 23 H 0.046 0.954 24 H 0.269 0.731 25 H 0.068 0.932 26 H 0.061 0.939 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.334 0.666 30 H 0.338 0.662 31 H 0.090 0.910 32 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.168 -11.551 1.475 12.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.241 4.241 3 N -0.058 5.058 4 O -0.046 6.046 5 C -0.454 4.454 6 H 0.104 0.896 7 C -0.167 4.167 8 N -0.509 5.509 9 Si 0.772 3.228 10 H -0.200 1.200 11 H -0.204 1.204 12 H -0.193 1.193 13 C -0.023 4.023 14 H 0.087 0.913 15 C -0.150 4.150 16 C -0.197 4.197 17 C -0.027 4.027 18 H 0.097 0.903 19 N -0.372 5.372 20 C -0.150 4.150 21 H 0.068 0.932 22 H 0.083 0.917 23 H 0.065 0.935 24 H 0.078 0.922 25 H 0.087 0.913 26 H 0.080 0.920 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.145 0.855 30 H 0.150 0.850 31 H 0.109 0.891 32 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 5.150 -10.558 1.305 11.820 hybrid contribution -1.038 -0.127 0.342 1.100 sum 4.111 -10.685 1.647 11.567 Atomic orbital electron populations 1.20752 0.94418 1.01384 1.00827 1.23068 0.92412 0.91447 1.17146 1.69348 1.35595 0.93734 1.07100 1.83398 1.34795 1.08785 1.77631 1.21405 0.91026 0.80182 1.52776 0.89558 1.25235 0.96239 0.98335 0.96901 1.70034 1.07544 1.25784 1.47578 0.85627 0.78884 0.79730 0.78581 1.20021 1.20420 1.19300 1.20276 0.93953 0.91837 0.96250 0.91293 1.22480 0.96608 0.97684 0.98181 1.23229 0.97374 0.98479 1.00627 1.22179 0.91767 0.93679 0.95035 0.90316 1.58983 1.35576 1.27735 1.14927 1.22188 0.93477 0.99950 0.99407 0.93233 0.91708 0.93539 0.92162 0.91292 0.92008 0.92133 0.92144 0.85454 0.84954 0.89140 0.91737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -2.37 9.69 36.01 0.35 -2.02 16 2 C -0.06 -1.42 6.39 -78.92 -0.50 -1.92 16 3 N -0.35 -8.88 8.61 35.59 0.31 -8.58 16 4 O 0.02 0.53 8.65 14.94 0.13 0.66 16 5 C -0.38 -10.92 10.14 30.90 0.31 -10.61 16 6 H 0.09 2.42 7.83 -52.48 -0.41 2.01 16 7 C 0.04 1.03 5.49 -17.51 -0.10 0.93 16 8 N -0.87 -25.73 13.67 55.48 0.76 -24.97 16 9 Si 0.95 21.12 29.55 -169.99 -5.02 16.09 16 10 H -0.27 -5.97 7.11 56.52 0.40 -5.57 16 11 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 12 H -0.27 -5.82 7.11 56.52 0.40 -5.41 16 13 C 0.00 -0.06 3.18 -90.12 -0.29 -0.35 16 14 H 0.07 1.08 8.14 -51.93 -0.42 0.66 16 15 C -0.11 -1.62 6.27 -24.70 -0.15 -1.78 16 16 C -0.16 -1.92 6.52 -25.03 -0.16 -2.09 16 17 C 0.08 1.17 4.04 -66.59 -0.27 0.90 16 18 H 0.08 1.13 8.14 -51.93 -0.42 0.71 16 19 N -0.84 -9.94 9.13 -3.72 -0.03 -9.98 16 20 C -0.11 -1.90 5.94 -25.61 -0.15 -2.06 16 21 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 22 H 0.06 1.52 7.40 -51.93 -0.38 1.14 16 23 H 0.05 0.80 8.12 -51.93 -0.42 0.38 16 24 H 0.27 7.28 8.31 -40.81 -0.34 6.94 16 25 H 0.07 1.12 8.05 -51.92 -0.42 0.71 16 26 H 0.06 0.82 8.14 -51.93 -0.42 0.40 16 27 H 0.06 0.66 8.02 -51.93 -0.42 0.24 16 28 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 29 H 0.33 3.21 9.06 -39.29 -0.36 2.86 16 30 H 0.34 3.62 8.93 -39.29 -0.35 3.27 16 31 H 0.09 1.83 6.65 -51.93 -0.35 1.48 16 32 H 0.06 1.09 7.90 -51.93 -0.41 0.68 16 LS Contribution 269.58 15.07 4.06 4.06 Total: -1.00 -30.51 269.58 -5.53 -36.04 By element: Atomic # 1 Polarization: 10.42 SS G_CDS: -4.76 Total: 5.66 kcal Atomic # 6 Polarization: -18.03 SS G_CDS: -0.96 Total: -18.99 kcal Atomic # 7 Polarization: -44.56 SS G_CDS: 1.03 Total: -43.53 kcal Atomic # 8 Polarization: 0.53 SS G_CDS: 0.13 Total: 0.66 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -5.02 Total: 16.09 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -30.51 -5.53 -36.04 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000381989220.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.908 kcal (2) G-P(sol) polarization free energy of solvation -30.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.527 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.039 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds