Wall clock time and date at job start Mon Mar 30 2020 02:52:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35583 * 116.99955 * 2 1 4 4 C 1.38895 * 120.57629 * 359.97438 * 3 2 1 5 5 C 1.38741 * 118.53292 * 180.02562 * 4 3 2 6 6 Cl 1.73603 * 120.19159 * 179.97438 * 5 4 3 7 7 C 1.39125 * 119.62475 * 359.97438 * 5 4 3 8 8 N 1.31322 * 121.15744 * 0.02562 * 7 5 4 9 9 C 1.33694 * 121.58176 * 0.02562 * 8 7 5 10 10 C 1.41001 * 119.87551 * 179.97438 * 9 8 7 11 11 H 1.08000 * 120.00233 * 179.97438 * 10 9 8 12 12 C 1.40046 * 119.99834 * 359.97438 * 10 9 8 13 13 N 1.30770 * 120.00082 * 0.02562 * 12 10 9 14 14 Si 1.86798 * 120.00088 * 180.02562 * 12 10 9 15 15 H 1.48506 * 109.46927 * 60.00333 * 14 12 10 16 16 H 1.48492 * 109.47435 * 180.02562 * 14 12 10 17 17 H 1.48505 * 109.47441 * 300.00587 * 14 12 10 18 18 H 1.09001 * 109.46539 * 60.00476 * 1 2 3 19 19 H 1.09006 * 109.47314 * 179.97438 * 1 2 3 20 20 H 1.08993 * 109.47639 * 300.00529 * 1 2 3 21 21 H 1.08000 * 120.73188 * 0.04587 * 4 3 2 22 22 H 1.08000 * 119.42353 * 179.72398 * 7 5 4 23 23 H 0.96998 * 120.00422 * 179.97438 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0446 1.2081 0.0000 4 6 1.2998 2.3805 -0.0005 5 6 1.9734 3.5934 -0.0011 6 17 1.0853 5.0851 -0.0024 7 6 3.3645 3.6076 -0.0005 8 7 4.0554 2.4907 0.0000 9 6 3.4551 1.2961 -0.0005 10 6 4.2322 0.1196 -0.0004 11 1 3.7494 -0.8465 -0.0004 12 6 5.6301 0.2038 -0.0004 13 7 6.2147 1.3736 0.0001 14 14 6.6597 -1.3548 -0.0011 15 1 6.3485 -2.1531 -1.2140 16 1 8.1007 -0.9962 -0.0003 17 1 6.3484 -2.1543 1.2110 18 1 -0.3632 0.5138 -0.8901 19 1 -0.3634 -1.0277 -0.0005 20 1 -0.3634 0.5139 0.8899 21 1 0.2203 2.3486 -0.0002 22 1 3.8855 4.5536 -0.0054 23 1 7.1829 1.4319 0.0005 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000214317167.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:52:12 Heat of formation + Delta-G solvation = -16.839684 kcal Electronic energy + Delta-G solvation = -11846.059285 eV Core-core repulsion = 9492.507355 eV Total energy + Delta-G solvation = -2353.551930 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 213.030 amu Computer time = 0.12 seconds Orbital eigenvalues (eV) -39.00104 -36.78054 -35.38314 -33.66105 -30.29043 -29.71173 -26.69272 -25.59539 -21.69240 -21.34817 -17.69205 -16.88324 -16.06450 -14.95562 -14.85234 -14.50571 -13.58563 -13.15876 -12.64406 -12.59207 -11.69365 -11.40374 -11.39212 -10.98368 -10.84016 -10.60819 -10.34311 -10.26840 -9.86884 -9.35722 -8.13043 -7.92336 -7.33086 -6.59414 -4.55087 2.49990 2.76351 3.03860 3.06647 3.10397 3.40074 3.86693 4.30709 4.57519 5.60010 5.65720 5.74981 5.82228 5.97512 6.03390 6.36618 6.55128 7.00118 7.09062 7.23580 7.65446 8.03851 8.12516 8.52492 8.81838 9.85284 10.14210 Molecular weight = 213.03amu Principal moments of inertia in cm(-1) A = 0.036103 B = 0.010653 C = 0.008262 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 775.375092 B = 2627.792059 C = 3388.023070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.307 6.307 3 C -0.020 4.020 4 C -0.138 4.138 5 C -0.203 4.203 6 Cl -0.127 7.127 7 C 0.124 3.876 8 N -0.458 5.458 9 C 0.245 3.755 10 C -0.398 4.398 11 H 0.094 0.906 12 C 0.062 3.938 13 N -0.707 5.707 14 Si 0.915 3.085 15 H -0.263 1.263 16 H -0.276 1.276 17 H -0.263 1.263 18 H 0.041 0.959 19 H 0.085 0.915 20 H 0.041 0.959 21 H 0.112 0.888 22 H 0.129 0.871 23 H 0.278 0.722 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.508 -0.957 -0.005 4.609 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.220 6.220 3 C -0.069 4.069 4 C -0.162 4.162 5 C -0.235 4.235 6 Cl -0.100 7.100 7 C -0.040 4.040 8 N -0.173 5.173 9 C 0.120 3.880 10 C -0.429 4.429 11 H 0.112 0.888 12 C -0.164 4.164 13 N -0.327 5.327 14 Si 0.739 3.261 15 H -0.187 1.187 16 H -0.201 1.201 17 H -0.187 1.187 18 H 0.060 0.940 19 H 0.104 0.896 20 H 0.060 0.940 21 H 0.130 0.870 22 H 0.147 0.853 23 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -3.374 -0.928 -0.005 3.499 hybrid contribution -0.965 -0.214 0.000 0.988 sum -4.339 -1.142 -0.005 4.487 Atomic orbital electron populations 1.22792 0.81376 1.02113 1.00143 1.85961 1.18585 1.27337 1.90139 1.20156 0.93203 0.82973 1.10581 1.20770 0.98256 0.91114 1.06092 1.21161 0.92220 0.84580 1.25553 1.98212 1.77137 1.36481 1.98164 1.22550 0.88187 0.97786 0.95524 1.69070 1.33833 0.95675 1.18689 1.18299 0.85162 0.92538 0.92013 1.19641 0.90676 0.93217 1.39318 0.88759 1.26172 0.98821 0.97665 0.93789 1.70110 1.11094 1.24769 1.26772 0.86252 0.78271 0.81466 0.80155 1.18708 1.20078 1.18712 0.94016 0.89637 0.94006 0.87046 0.85332 0.91094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.52 9.83 101.05 0.99 1.52 14 2 O -0.31 -6.85 9.62 -18.44 -0.18 -7.02 14 3 C -0.02 -0.50 6.73 -38.16 -0.26 -0.76 14 4 C -0.14 -3.12 8.92 -39.15 -0.35 -3.47 14 5 C -0.20 -4.62 6.36 -39.07 -0.25 -4.87 14 6 Cl -0.13 -2.47 28.98 -51.86 -1.50 -3.97 14 7 C 0.12 3.02 10.98 -17.44 -0.19 2.83 14 8 N -0.46 -12.44 7.85 -10.96 -0.09 -12.53 14 9 C 0.25 6.66 6.56 -84.83 -0.56 6.10 14 10 C -0.40 -10.50 8.95 -37.86 -0.34 -10.84 14 11 H 0.09 2.38 7.32 -52.49 -0.38 2.00 14 12 C 0.06 1.53 5.50 -17.33 -0.10 1.44 14 13 N -0.71 -18.23 11.46 55.55 0.64 -17.59 14 14 Si 0.91 18.12 29.56 -169.99 -5.02 13.10 14 15 H -0.26 -5.14 7.11 56.52 0.40 -4.74 14 16 H -0.28 -5.29 7.11 56.52 0.40 -4.89 14 17 H -0.26 -5.14 7.11 56.52 0.40 -4.74 14 18 H 0.04 0.64 7.69 -51.93 -0.40 0.24 14 19 H 0.09 1.13 8.14 -51.93 -0.42 0.71 14 20 H 0.04 0.64 7.69 -51.93 -0.40 0.25 14 21 H 0.11 2.23 6.44 -52.49 -0.34 1.89 14 22 H 0.13 2.84 8.06 -52.49 -0.42 2.42 14 23 H 0.28 6.45 8.29 -40.82 -0.34 6.12 14 LS Contribution 226.26 15.07 3.41 3.41 Total: -1.00 -28.11 226.26 -5.29 -33.40 By element: Atomic # 1 Polarization: 0.76 SS G_CDS: -1.50 Total: -0.74 kcal Atomic # 6 Polarization: -7.01 SS G_CDS: -1.04 Total: -8.05 kcal Atomic # 7 Polarization: -30.67 SS G_CDS: 0.55 Total: -30.12 kcal Atomic # 8 Polarization: -6.85 SS G_CDS: -0.18 Total: -7.02 kcal Atomic # 14 Polarization: 18.12 SS G_CDS: -5.02 Total: 13.10 kcal Atomic # 17 Polarization: -2.47 SS G_CDS: -1.50 Total: -3.97 kcal Total LS contribution 3.41 Total: 3.41 kcal Total: -28.11 -5.29 -33.40 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000214317167.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.562 kcal (2) G-P(sol) polarization free energy of solvation -28.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.840 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.12 seconds