Wall clock time and date at job start Mon Mar 30 2020 02:51:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35694 * 117.00293 * 2 1 4 4 C 1.38445 * 119.55868 * 180.02562 * 3 2 1 5 5 C 1.40854 * 118.83454 * 180.27321 * 4 3 2 6 6 C 1.41549 * 120.98821 * 179.74623 * 5 4 3 7 7 H 1.08001 * 120.00343 * 23.27266 * 6 5 4 8 8 C 1.40027 * 120.00093 * 203.26563 * 6 5 4 9 9 N 1.30749 * 119.99449 * 17.03623 * 8 6 5 10 10 Si 1.86797 * 120.00300 * 197.03454 * 8 6 5 11 11 H 1.48493 * 109.47146 * 60.00064 * 10 8 6 12 12 H 1.48499 * 109.47074 * 180.02562 * 10 8 6 13 13 H 1.48500 * 109.47016 * 299.99839 * 10 8 6 14 14 C 1.41116 * 118.01213 * 359.51376 * 5 4 3 15 15 C 1.37748 * 118.98246 * 0.48844 * 14 5 4 16 16 Cl 1.73595 * 119.47296 * 179.72877 * 15 14 5 17 17 N 1.32198 * 121.05593 * 359.74877 * 15 14 5 18 18 H 1.08991 * 109.47313 * 60.00088 * 1 2 3 19 19 H 1.09002 * 109.47313 * 180.02562 * 1 2 3 20 20 H 1.09004 * 109.46570 * 299.99721 * 1 2 3 21 21 H 1.07999 * 120.58097 * 0.02562 * 4 3 2 22 22 H 0.97002 * 119.99302 * 180.02562 * 9 8 6 23 23 H 1.08001 * 120.50320 * 180.21967 * 14 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2090 0.0000 4 6 3.4282 1.2707 -0.0005 5 6 4.0518 2.5337 0.0054 6 6 5.4625 2.6499 0.0104 7 1 6.0725 1.8390 -0.3595 8 6 6.0672 3.8162 0.4950 9 7 5.3832 4.6472 1.2374 10 14 7.8510 4.1849 0.0808 11 1 8.0063 4.2858 -1.3926 12 1 8.2500 5.4693 0.7102 13 1 8.7148 3.0923 0.5960 14 6 3.2282 3.6796 0.0010 15 6 1.8602 3.5183 0.0015 16 17 0.8350 4.9191 0.0033 17 7 1.3155 2.3137 0.0010 18 1 -0.3633 0.5138 -0.8899 19 1 -0.3634 -1.0277 0.0005 20 1 -0.3632 0.5138 0.8901 21 1 4.0185 0.3664 -0.0014 22 1 5.8020 5.4553 1.5727 23 1 3.6638 4.6678 0.0017 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000222344729.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:51:59 Heat of formation + Delta-G solvation = -29.177986 kcal Electronic energy + Delta-G solvation = -11733.345007 eV Core-core repulsion = 9379.258048 eV Total energy + Delta-G solvation = -2354.086959 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 213.030 amu Computer time = 0.13 seconds Orbital eigenvalues (eV) -39.12623 -36.90560 -35.49394 -34.07382 -30.91834 -29.13866 -26.76635 -25.74540 -21.90539 -21.33106 -18.21083 -16.52001 -15.58545 -15.31568 -15.08073 -14.31184 -13.80891 -13.37856 -12.83618 -12.70971 -11.65571 -11.42768 -11.33701 -11.11196 -11.03698 -10.51249 -10.39216 -10.14155 -9.93526 -9.48276 -8.43952 -8.26999 -7.25366 -7.00610 -4.80726 2.47581 2.67719 2.94087 2.95881 2.98117 3.11094 3.73765 4.11460 4.41640 5.37937 5.78419 5.85167 5.87965 6.19979 6.56962 6.67356 6.87731 6.98719 7.07017 7.37901 7.72573 8.11104 8.32621 8.51513 8.55627 9.12779 9.88937 Molecular weight = 213.03amu Principal moments of inertia in cm(-1) A = 0.032926 B = 0.010688 C = 0.008259 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 850.199613 B = 2619.027220 C = 3389.404495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.048 3.952 2 O -0.321 6.321 3 C 0.334 3.666 4 C -0.292 4.292 5 C 0.155 3.845 6 C -0.440 4.440 7 H 0.089 0.911 8 C 0.076 3.924 9 N -0.773 5.773 10 Si 0.919 3.081 11 H -0.260 1.260 12 H -0.275 1.275 13 H -0.262 1.262 14 C -0.212 4.212 15 C 0.206 3.794 16 Cl -0.088 7.088 17 N -0.625 5.625 18 H 0.049 0.951 19 H 0.080 0.920 20 H 0.049 0.951 21 H 0.115 0.885 22 H 0.289 0.711 23 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.699 -0.844 -1.388 2.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 O -0.230 6.230 3 C 0.160 3.840 4 C -0.316 4.316 5 C 0.147 3.853 6 C -0.470 4.470 7 H 0.107 0.893 8 C -0.146 4.146 9 N -0.396 5.396 10 Si 0.742 3.258 11 H -0.184 1.184 12 H -0.200 1.200 13 H -0.186 1.186 14 C -0.237 4.237 15 C 0.050 3.950 16 Cl -0.060 7.060 17 N -0.357 5.357 18 H 0.068 0.932 19 H 0.098 0.902 20 H 0.068 0.932 21 H 0.133 0.867 22 H 0.100 0.900 23 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.596 -0.824 -1.239 2.992 hybrid contribution 1.139 0.570 -0.031 1.274 sum -1.457 -0.254 -1.270 1.949 Atomic orbital electron populations 1.22560 0.79388 1.01039 1.01793 1.86177 1.21260 1.26250 1.89338 1.19099 0.88695 0.82617 0.93619 1.20847 0.90314 0.98561 1.21875 1.17483 0.93545 0.88977 0.85285 1.19606 0.90872 1.01188 1.35378 0.89263 1.26074 1.01428 0.94896 0.92199 1.69762 1.38949 1.09803 1.21107 0.86181 0.80755 0.78641 0.80232 1.18425 1.19999 1.18623 1.21861 0.89575 1.01414 1.10833 1.20663 0.87580 0.85746 1.00990 1.98286 1.71092 1.39552 1.97102 1.65936 1.41244 0.97485 1.31015 0.93210 0.90153 0.93184 0.86709 0.89999 0.84266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.82 10.38 101.05 1.05 1.87 14 2 O -0.32 -6.92 10.47 -18.79 -0.20 -7.12 14 3 C 0.33 8.14 7.48 -17.24 -0.13 8.02 14 4 C -0.29 -7.29 9.83 -38.52 -0.38 -7.67 14 5 C 0.16 4.03 5.61 -106.55 -0.60 3.43 14 6 C -0.44 -10.96 9.12 -37.65 -0.34 -11.30 14 7 H 0.09 2.09 7.90 -52.49 -0.41 1.68 14 8 C 0.08 1.77 5.20 -17.34 -0.09 1.68 14 9 N -0.77 -18.69 10.91 55.55 0.61 -18.08 14 10 Si 0.92 17.26 29.59 -169.99 -5.03 12.23 14 11 H -0.26 -4.86 7.11 56.52 0.40 -4.46 14 12 H -0.28 -5.04 7.11 56.52 0.40 -4.63 14 13 H -0.26 -4.86 7.11 56.52 0.40 -4.45 14 14 C -0.21 -5.45 8.55 -38.67 -0.33 -5.78 14 15 C 0.21 5.07 7.26 -17.57 -0.13 4.94 14 16 Cl -0.09 -1.86 29.09 -51.86 -1.51 -3.37 14 17 N -0.63 -15.39 9.15 -10.60 -0.10 -15.49 14 18 H 0.05 0.85 8.10 -51.93 -0.42 0.43 14 19 H 0.08 1.06 8.14 -51.93 -0.42 0.64 14 20 H 0.05 0.87 8.10 -51.93 -0.42 0.45 14 21 H 0.11 2.68 8.06 -52.49 -0.42 2.26 14 22 H 0.29 6.30 8.29 -40.82 -0.34 5.96 14 23 H 0.14 3.61 6.18 -52.49 -0.32 3.28 14 LS Contribution 228.74 15.07 3.45 3.45 Total: -1.00 -26.76 228.74 -5.29 -32.05 By element: Atomic # 1 Polarization: 2.71 SS G_CDS: -1.56 Total: 1.15 kcal Atomic # 6 Polarization: -3.86 SS G_CDS: -0.95 Total: -4.81 kcal Atomic # 7 Polarization: -34.08 SS G_CDS: 0.51 Total: -33.57 kcal Atomic # 8 Polarization: -6.92 SS G_CDS: -0.20 Total: -7.12 kcal Atomic # 14 Polarization: 17.26 SS G_CDS: -5.03 Total: 12.23 kcal Atomic # 17 Polarization: -1.86 SS G_CDS: -1.51 Total: -3.37 kcal Total LS contribution 3.45 Total: 3.45 kcal Total: -26.76 -5.29 -32.05 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000222344729.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.872 kcal (2) G-P(sol) polarization free energy of solvation -26.762 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.890 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.288 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.050 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.13 seconds