Wall clock time and date at job start Mon Mar 30 2020 02:51:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37836 * 119.70976 * 2 1 4 4 C 1.39571 * 119.95486 * 0.02562 * 3 2 1 5 5 H 1.07997 * 120.00260 * 314.96519 * 4 3 2 6 6 C 1.40564 * 119.99823 * 134.95350 * 4 3 2 7 7 N 1.30484 * 119.99960 * 339.21708 * 6 4 3 8 8 Si 1.86798 * 119.99986 * 159.21515 * 6 4 3 9 9 H 1.48497 * 109.47192 * 90.00249 * 8 6 4 10 10 H 1.48499 * 109.47107 * 210.00510 * 8 6 4 11 11 H 1.48503 * 109.46987 * 330.00083 * 8 6 4 12 12 C 1.40108 * 120.08904 * 180.27643 * 3 2 1 13 13 Cl 1.73599 * 120.22145 * 179.75135 * 12 3 2 14 14 C 1.39428 * 119.55488 * 359.73231 * 12 3 2 15 15 C 1.37842 * 119.42891 * 359.97438 * 14 12 3 16 16 C 1.34615 * 119.70085 * 179.72826 * 2 1 3 17 17 O 1.21917 * 119.77630 * 0.02562 * 16 2 1 18 18 H 1.08996 * 109.47427 * 180.27422 * 1 2 3 19 19 H 1.09000 * 109.46626 * 300.27300 * 1 2 3 20 20 H 1.08998 * 109.47325 * 60.26512 * 1 2 3 21 21 H 0.96998 * 120.00086 * 185.19011 * 7 6 4 22 22 H 1.07996 * 120.28750 * 179.97438 * 14 12 3 23 23 H 1.08000 * 120.06279 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1482 1.1972 0.0000 4 6 1.4432 2.4018 0.0005 5 1 0.5998 2.5342 -0.6608 6 6 1.8310 3.4425 0.8621 7 7 2.5505 3.1809 1.9187 8 14 1.3162 5.2001 0.4944 9 1 0.0118 5.4806 1.1464 10 1 2.3429 6.1365 1.0181 11 1 1.1847 5.3805 -0.9738 12 6 3.5492 1.2064 -0.0058 13 17 4.4130 2.7122 -0.0124 14 6 4.2450 -0.0018 -0.0060 15 6 3.5425 -1.1878 0.0002 16 6 2.1320 -1.1693 0.0055 17 8 1.5128 -2.2195 0.0101 18 1 -0.3634 -1.0276 0.0049 19 1 -0.3632 0.5181 0.8875 20 1 -0.3634 0.5097 -0.8923 21 1 2.7547 3.8857 2.5531 22 1 5.3249 -0.0085 -0.0109 23 1 4.0711 -2.1297 -0.0003 RHF calculation, no. of doubly occupied orbitals= 35 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261297609.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:51:35 Heat of formation + Delta-G solvation = -25.791730 kcal Electronic energy + Delta-G solvation = -12214.368271 eV Core-core repulsion = 9860.428151 eV Total energy + Delta-G solvation = -2353.940120 eV No. of doubly occupied orbitals = 35 Molecular weight (most abundant/longest-lived isotopes) = 213.030 amu Computer time = 0.13 seconds Orbital eigenvalues (eV) -39.66642 -36.10824 -34.79245 -33.67488 -32.88869 -29.14481 -26.50170 -25.59013 -21.97708 -21.10514 -17.83049 -16.26629 -16.16066 -15.30537 -14.66556 -14.57487 -13.59555 -13.12611 -12.27325 -12.10955 -12.07582 -11.85284 -11.41059 -11.30400 -11.08323 -10.77636 -10.49711 -9.94657 -9.47910 -8.82647 -8.69189 -8.63592 -7.21884 -6.55513 -5.02314 2.22744 2.82718 2.91834 2.96006 3.20613 3.56609 3.68029 4.26334 4.46833 5.02993 5.86490 6.01065 6.14777 6.40003 6.48440 6.54272 6.73229 6.76223 7.27714 7.41867 7.46307 7.82039 8.16178 8.22329 8.57373 9.34255 9.76678 Molecular weight = 213.03amu Principal moments of inertia in cm(-1) A = 0.037111 B = 0.014575 C = 0.011170 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 754.314069 B = 1920.670538 C = 2506.191794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.079 3.921 2 N -0.517 5.517 3 C 0.343 3.657 4 C -0.471 4.471 5 H 0.099 0.901 6 C 0.097 3.903 7 N -0.739 5.739 8 Si 0.913 3.087 9 H -0.266 1.266 10 H -0.270 1.270 11 H -0.254 1.254 12 C -0.224 4.224 13 Cl -0.088 7.088 14 C 0.028 3.972 15 C -0.378 4.378 16 C 0.523 3.477 17 O -0.609 6.609 18 H 0.083 0.917 19 H 0.069 0.931 20 H 0.060 0.940 21 H 0.293 0.707 22 H 0.108 0.892 23 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.375 4.421 -1.320 4.629 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.231 5.231 3 C 0.235 3.765 4 C -0.501 4.501 5 H 0.116 0.884 6 C -0.131 4.131 7 N -0.359 5.359 8 Si 0.736 3.264 9 H -0.191 1.191 10 H -0.195 1.195 11 H -0.177 1.177 12 C -0.253 4.253 13 Cl -0.060 7.060 14 C 0.006 3.994 15 C -0.400 4.400 16 C 0.331 3.669 17 O -0.499 6.499 18 H 0.101 0.899 19 H 0.087 0.913 20 H 0.078 0.922 21 H 0.104 0.896 22 H 0.127 0.873 23 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -0.508 3.971 -1.135 4.161 hybrid contribution 0.053 1.032 0.027 1.034 sum -0.455 5.003 -1.108 5.145 Atomic orbital electron populations 1.21658 0.79431 1.03131 1.02088 1.45975 1.07781 1.06503 1.62828 1.17541 0.89552 0.84277 0.85081 1.19154 1.15075 0.95289 1.20611 0.88352 1.25748 0.92430 1.01302 0.93569 1.69618 1.23087 1.36797 1.06440 0.86175 0.79183 0.80196 0.80861 1.19146 1.19501 1.17738 1.19699 0.89948 0.85058 1.30643 1.98172 1.75571 1.34379 1.97848 1.20964 0.98382 0.91023 0.89037 1.21287 0.92104 0.97465 1.29189 1.17079 0.89190 0.82320 0.78344 1.90704 1.70476 1.30787 1.57943 0.89881 0.91257 0.92174 0.89569 0.87348 0.86039 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.59 9.59 59.85 0.57 2.16 14 2 N -0.52 -12.43 3.04 -124.28 -0.38 -12.81 14 3 C 0.34 8.35 6.03 -83.97 -0.51 7.84 14 4 C -0.47 -10.80 7.57 -38.21 -0.29 -11.09 14 5 H 0.10 2.11 7.45 -52.49 -0.39 1.72 14 6 C 0.10 2.14 3.70 -17.25 -0.06 2.07 14 7 N -0.74 -17.01 11.21 55.58 0.62 -16.39 14 8 Si 0.91 16.72 29.61 -169.99 -5.03 11.68 14 9 H -0.27 -4.73 7.11 56.52 0.40 -4.33 14 10 H -0.27 -4.93 7.11 56.52 0.40 -4.53 14 11 H -0.25 -4.64 7.11 56.52 0.40 -4.24 14 12 C -0.22 -5.37 5.95 -38.44 -0.23 -5.59 14 13 Cl -0.09 -1.94 24.94 -51.86 -1.29 -3.23 14 14 C 0.03 0.64 9.91 -39.28 -0.39 0.25 14 15 C -0.38 -9.03 10.04 -38.65 -0.39 -9.42 14 16 C 0.52 13.44 7.42 -15.26 -0.11 13.33 14 17 O -0.61 -16.76 16.36 4.99 0.08 -16.67 14 18 H 0.08 1.65 6.85 -51.93 -0.36 1.30 14 19 H 0.07 1.32 8.08 -51.93 -0.42 0.90 14 20 H 0.06 1.07 7.77 -51.93 -0.40 0.67 14 21 H 0.29 6.13 8.30 -40.82 -0.34 5.80 14 22 H 0.11 2.14 8.06 -52.49 -0.42 1.72 14 23 H 0.12 2.70 8.06 -52.49 -0.42 2.28 14 LS Contribution 221.26 15.07 3.33 3.33 Total: -1.00 -27.64 221.26 -5.62 -33.26 By element: Atomic # 1 Polarization: 2.83 SS G_CDS: -1.55 Total: 1.28 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -1.40 Total: -0.45 kcal Atomic # 7 Polarization: -29.44 SS G_CDS: 0.25 Total: -29.20 kcal Atomic # 8 Polarization: -16.76 SS G_CDS: 0.08 Total: -16.67 kcal Atomic # 14 Polarization: 16.72 SS G_CDS: -5.03 Total: 11.68 kcal Atomic # 17 Polarization: -1.94 SS G_CDS: -1.29 Total: -3.23 kcal Total LS contribution 3.33 Total: 3.33 kcal Total: -27.64 -5.62 -33.26 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261297609.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.464 kcal (2) G-P(sol) polarization free energy of solvation -27.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.255 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.13 seconds