Wall clock time and date at job start Mon Mar 30 2020 02:27:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34643 * 116.99674 * 2 1 4 4 O 1.21510 * 120.00150 * 359.97438 * 3 2 1 5 5 N 1.34778 * 119.99803 * 179.72042 * 3 2 1 6 6 C 1.47064 * 136.05469 * 359.90110 * 5 3 2 7 7 C 1.53763 * 87.88318 * 152.96318 * 6 5 3 8 8 N 1.46504 * 114.26254 * 139.79180 * 7 6 5 9 9 C 1.46502 * 120.00227 * 326.47585 * 8 7 6 10 10 C 1.36938 * 119.99762 * 146.47908 * 8 7 6 11 11 H 1.07995 * 120.00332 * 23.09449 * 10 8 7 12 12 C 1.38811 * 120.00051 * 203.09168 * 10 8 7 13 13 N 1.31622 * 119.99876 * 11.91311 * 12 10 8 14 14 Si 1.86793 * 120.00233 * 191.91465 * 12 10 8 15 15 H 1.48502 * 109.47277 * 59.99790 * 14 12 10 16 16 H 1.48503 * 109.47501 * 179.97438 * 14 12 10 17 17 H 1.48503 * 109.47245 * 299.99811 * 14 12 10 18 18 C 1.47062 * 136.05598 * 180.27652 * 5 3 2 19 19 H 1.09000 * 109.47569 * 300.00322 * 1 2 3 20 20 H 1.09003 * 109.47056 * 60.00345 * 1 2 3 21 21 H 1.09001 * 109.47369 * 179.97438 * 1 2 3 22 22 H 1.08992 * 113.47100 * 267.69507 * 6 5 3 23 23 H 1.08994 * 113.46982 * 38.14259 * 6 5 3 24 24 H 1.08996 * 114.39888 * 272.67316 * 7 6 5 25 25 H 1.08998 * 109.46860 * 94.20440 * 9 8 7 26 26 H 1.09004 * 109.47153 * 214.20489 * 9 8 7 27 27 H 1.08997 * 109.47039 * 334.20309 * 9 8 7 28 28 H 0.97001 * 120.00102 * 180.02562 * 13 12 10 29 29 H 1.09003 * 113.47054 * 321.86598 * 18 5 3 30 30 H 1.08999 * 113.46793 * 92.30336 * 18 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0632 1.1997 0.0000 4 8 1.4014 2.2188 -0.0005 5 7 3.4091 1.2703 0.0057 6 6 4.5199 0.3066 0.0144 7 6 5.3770 1.3748 -0.6845 8 7 6.7580 1.4495 -0.2012 9 6 7.0574 1.1757 1.2065 10 6 7.7691 1.7752 -1.0654 11 1 7.5513 2.3264 -1.9682 12 6 9.0741 1.3971 -0.7809 13 7 9.3138 0.5337 0.1832 14 14 10.4900 2.1134 -1.7664 15 1 10.5029 3.5904 -1.6125 16 1 11.7725 1.5533 -1.2694 17 1 10.3206 1.7666 -3.2003 18 6 4.4130 2.3449 0.0126 19 1 -0.3634 0.5139 0.8899 20 1 -0.3633 0.5138 -0.8900 21 1 -0.3634 -1.0277 -0.0005 22 1 4.8697 0.0564 1.0159 23 1 4.3353 -0.5743 -0.6004 24 1 5.3006 1.3729 -1.7717 25 1 7.3356 0.1281 1.3217 26 1 7.8827 1.8088 1.5323 27 1 6.1765 1.3865 1.8129 28 1 10.2257 0.2697 0.3823 29 1 4.1373 3.2006 -0.6037 30 1 4.7346 2.6320 1.0137 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260078874.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:27:30 Heat of formation + Delta-G solvation = -7.497002 kcal Electronic energy + Delta-G solvation = -14463.697174 eV Core-core repulsion = 11876.081487 eV Total energy + Delta-G solvation = -2587.615688 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 214.110 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.30366 -38.68992 -35.94451 -34.63377 -31.18024 -28.92761 -26.84327 -26.20215 -25.40841 -23.36729 -20.71882 -19.00548 -17.66166 -17.01615 -16.77734 -16.31222 -15.39216 -14.41605 -14.14137 -13.68315 -13.41381 -12.93182 -12.54426 -12.30775 -12.07271 -11.76278 -11.30731 -10.91995 -10.89359 -10.64991 -10.57926 -10.37455 -10.22080 -10.10859 -9.90385 -8.63814 -8.37948 -6.90693 -5.84573 -3.33617 2.28163 3.08395 3.34718 3.40458 3.41382 4.17445 4.43031 5.07447 5.16751 5.22533 5.41847 5.43633 5.48062 5.57479 5.76376 5.82462 5.98788 6.08597 6.15973 6.52546 6.62981 6.76520 7.26561 7.60982 7.72006 8.05252 8.26431 8.51617 9.10019 9.70918 10.18933 11.19897 Molecular weight = 214.11amu Principal moments of inertia in cm(-1) A = 0.075156 B = 0.006330 C = 0.006180 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 372.468560 B = 4422.378107 C = 4529.999913 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 O -0.372 6.372 3 C 0.673 3.327 4 O -0.585 6.585 5 N -0.628 5.628 6 C 0.077 3.923 7 C 0.161 3.839 8 N -0.576 5.576 9 C 0.156 3.844 10 C -0.267 4.267 11 H 0.073 0.927 12 C 0.008 3.992 13 N -0.904 5.904 14 Si 0.910 3.090 15 H -0.282 1.282 16 H -0.290 1.290 17 H -0.281 1.281 18 C 0.095 3.905 19 H 0.060 0.940 20 H 0.060 0.940 21 H 0.099 0.901 22 H 0.086 0.914 23 H 0.072 0.928 24 H 0.103 0.897 25 H 0.035 0.965 26 H 0.048 0.952 27 H 0.002 0.998 28 H 0.256 0.744 29 H 0.072 0.928 30 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.455 -1.582 0.388 10.581 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.037 4.037 2 O -0.286 6.286 3 C 0.429 3.571 4 O -0.476 6.476 5 N -0.369 5.369 6 C -0.048 4.048 7 C 0.049 3.951 8 N -0.295 5.295 9 C 0.012 3.988 10 C -0.396 4.396 11 H 0.091 0.909 12 C -0.191 4.191 13 N -0.548 5.548 14 Si 0.739 3.261 15 H -0.209 1.209 16 H -0.216 1.216 17 H -0.208 1.208 18 C -0.029 4.029 19 H 0.078 0.922 20 H 0.079 0.921 21 H 0.117 0.883 22 H 0.104 0.896 23 H 0.091 0.909 24 H 0.120 0.880 25 H 0.054 0.946 26 H 0.067 0.933 27 H 0.020 0.980 28 H 0.066 0.934 29 H 0.090 0.910 30 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -10.721 -1.396 0.466 10.821 hybrid contribution 0.513 0.279 -0.296 0.654 sum -10.208 -1.117 0.171 10.270 Atomic orbital electron populations 1.23117 0.75119 1.03029 1.02430 1.86268 1.23493 1.31424 1.87366 1.17335 0.81443 0.81834 0.76500 1.90954 1.63795 1.35163 1.57661 1.48045 1.00073 1.14574 1.74256 1.24065 0.83243 0.95434 1.02070 1.22005 0.84197 0.91678 0.97266 1.43864 1.00387 1.79177 1.06098 1.20900 0.95332 1.00382 0.82211 1.19199 0.86478 1.29697 1.04267 0.90948 1.25081 0.98287 0.97203 0.98526 1.70055 1.19657 1.32589 1.32492 0.86260 0.81417 0.78799 0.79580 1.20876 1.21567 1.20757 1.24136 0.83999 0.92745 1.02035 0.92166 0.92104 0.88282 0.89556 0.90906 0.87951 0.94620 0.93330 0.97952 0.93425 0.90990 0.89881 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.65 10.56 101.05 1.07 1.72 16 2 O -0.37 -5.92 10.59 -40.33 -0.43 -6.35 16 3 C 0.67 12.51 8.96 54.06 0.48 12.99 16 4 O -0.59 -12.15 16.91 -19.28 -0.33 -12.48 16 5 N -0.63 -11.38 3.69 -190.94 -0.70 -12.08 16 6 C 0.08 1.35 8.06 -8.37 -0.07 1.28 16 7 C 0.16 3.11 4.73 -67.67 -0.32 2.79 16 8 N -0.58 -13.44 3.16 -173.10 -0.55 -13.99 16 9 C 0.16 3.55 7.75 59.85 0.46 4.01 16 10 C -0.27 -6.90 9.68 -15.06 -0.15 -7.05 16 11 H 0.07 1.81 7.86 -52.49 -0.41 1.40 16 12 C 0.01 0.22 5.12 -17.43 -0.09 0.13 16 13 N -0.90 -25.01 10.66 55.49 0.59 -24.42 16 14 Si 0.91 20.87 29.57 -169.99 -5.03 15.85 16 15 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 16 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 17 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 18 C 0.09 1.71 8.16 -8.51 -0.07 1.64 16 19 H 0.06 0.66 8.14 -51.93 -0.42 0.24 16 20 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 21 H 0.10 0.77 8.14 -51.93 -0.42 0.35 16 22 H 0.09 1.52 6.47 -51.93 -0.34 1.18 16 23 H 0.07 1.20 8.14 -51.93 -0.42 0.78 16 24 H 0.10 1.95 8.07 -51.93 -0.42 1.53 16 25 H 0.04 0.87 7.40 -51.93 -0.38 0.49 16 26 H 0.05 1.20 7.26 -51.93 -0.38 0.82 16 27 H 0.00 0.04 6.01 -51.93 -0.31 -0.27 16 28 H 0.26 6.89 8.31 -40.82 -0.34 6.55 16 29 H 0.07 1.25 8.14 -51.93 -0.42 0.83 16 30 H 0.08 1.49 7.03 -51.93 -0.36 1.12 16 LS Contribution 258.01 15.07 3.89 3.89 Total: -1.00 -30.06 258.01 -5.08 -35.14 By element: Atomic # 1 Polarization: 0.79 SS G_CDS: -3.85 Total: -3.06 kcal Atomic # 6 Polarization: 16.19 SS G_CDS: 1.32 Total: 17.51 kcal Atomic # 7 Polarization: -49.84 SS G_CDS: -0.66 Total: -50.50 kcal Atomic # 8 Polarization: -18.08 SS G_CDS: -0.75 Total: -18.83 kcal Atomic # 14 Polarization: 20.87 SS G_CDS: -5.03 Total: 15.85 kcal Total LS contribution 3.89 Total: 3.89 kcal Total: -30.06 -5.08 -35.14 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260078874.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.641 kcal (2) G-P(sol) polarization free energy of solvation -30.057 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds