Wall clock time and date at job start Mon Mar 30 2020 02:53:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52994 * 109.48772 * 2 1 4 4 O 1.42905 * 109.42813 * 239.92873 * 2 1 3 5 5 C 1.42899 * 114.15582 * 301.11522 * 4 2 1 6 6 C 1.53097 * 109.41522 * 298.87071 * 5 4 2 7 7 C 1.53183 * 109.15889 * 57.61114 * 6 5 4 8 8 H 1.08998 * 109.62018 * 62.92972 * 7 6 5 9 9 O 1.42903 * 109.54272 * 183.15485 * 7 6 5 10 10 C 1.53096 * 109.47579 * 120.02548 * 2 1 3 11 11 H 1.09006 * 109.51518 * 182.34457 * 10 2 1 12 12 C 1.53000 * 109.52121 * 302.46622 * 10 2 1 13 13 C 1.50703 * 109.46912 * 184.87762 * 12 10 2 14 14 H 1.07996 * 119.99751 * 0.02562 * 13 12 10 15 15 C 1.37877 * 120.00001 * 180.02562 * 13 12 10 16 16 N 1.31517 * 120.00094 * 359.97438 * 15 13 12 17 17 Si 1.86803 * 119.99955 * 180.02562 * 15 13 12 18 18 H 1.48498 * 109.47171 * 89.99544 * 17 15 13 19 19 H 1.48500 * 109.46632 * 209.99795 * 17 15 13 20 20 H 1.48494 * 109.47053 * 329.99231 * 17 15 13 21 21 H 1.09000 * 109.47455 * 299.97916 * 1 2 3 22 22 H 1.09008 * 109.46924 * 59.97611 * 1 2 3 23 23 H 1.09004 * 109.47374 * 179.97438 * 1 2 3 24 24 H 1.09002 * 109.46949 * 180.02562 * 3 2 1 25 25 H 1.09004 * 109.47251 * 300.01926 * 3 2 1 26 26 H 1.08995 * 109.47546 * 60.02362 * 3 2 1 27 27 H 1.09007 * 109.48146 * 178.89323 * 5 4 2 28 28 H 1.08995 * 109.48527 * 58.85369 * 5 4 2 29 29 H 1.08993 * 109.52446 * 297.70694 * 6 5 4 30 30 H 1.08999 * 109.52349 * 177.51008 * 6 5 4 31 31 H 0.96702 * 113.99421 * 299.55429 * 9 7 6 32 32 H 1.09002 * 109.47398 * 304.87840 * 12 10 2 33 33 H 1.09001 * 109.47194 * 64.88021 * 12 10 2 34 34 H 0.97000 * 120.00333 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0404 1.4423 0.0000 4 8 2.0053 -0.6753 -1.1663 5 6 1.5644 -2.0299 -1.2781 6 6 2.0777 -2.8328 -0.0798 7 6 1.5769 -2.1817 1.2131 8 1 0.4880 -2.2193 1.2439 9 8 2.1114 -2.8813 2.3388 10 6 2.0404 -0.7222 1.2497 11 1 3.1297 -0.6864 1.2716 12 6 1.4811 -0.0392 2.4993 13 6 2.0779 -0.6745 3.7287 14 1 2.7856 -1.4840 3.6286 15 6 1.7203 -0.2221 4.9811 16 7 0.8588 0.7642 5.1028 17 14 2.4605 -1.0090 6.5049 18 1 3.7081 -0.2937 6.8751 19 1 1.4905 -0.9252 7.6261 20 1 2.7713 -2.4338 6.2249 21 1 -0.3634 0.5135 0.8901 22 1 -0.3633 0.5142 -0.8898 23 1 -0.3634 -1.0277 -0.0005 24 1 3.1304 1.4420 -0.0005 25 1 1.6769 1.9564 -0.8898 26 1 1.6776 1.9562 0.8901 27 1 1.9530 -2.4638 -2.1996 28 1 0.4750 -2.0575 -1.2943 29 1 3.1676 -2.8396 -0.0858 30 1 1.7057 -3.8555 -0.1404 31 1 1.8575 -3.8135 2.3792 32 1 1.7348 1.0207 2.4784 33 1 0.3973 -0.1530 2.5212 34 1 0.6069 1.0822 5.9839 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260854311.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:53:58 Heat of formation + Delta-G solvation = -108.261214 kcal Electronic energy + Delta-G solvation = -15691.275787 eV Core-core repulsion = 13202.830979 eV Total energy + Delta-G solvation = -2488.444808 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 214.136 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -39.83567 -36.06526 -34.21609 -32.30757 -31.41298 -28.87257 -26.96654 -26.07321 -23.61360 -21.42151 -21.13968 -18.31584 -17.09573 -16.10506 -15.39966 -15.04099 -14.52025 -14.38313 -13.88976 -13.50193 -12.82050 -12.72859 -12.05514 -11.94272 -11.76459 -11.48657 -11.36421 -10.99711 -10.94955 -10.70909 -10.63010 -10.32366 -10.10515 -9.62256 -9.46670 -9.12695 -8.70530 -8.61969 -8.16840 -5.83095 -3.78335 3.42098 3.47878 3.54052 4.14118 4.61813 4.84232 5.13587 5.24611 5.28448 5.49619 5.52817 5.54521 5.67805 5.83603 5.89844 5.97494 6.09027 6.17683 6.28130 6.29884 6.43434 6.53586 6.61133 6.72801 6.91419 7.03214 7.69639 7.76917 7.85474 8.18457 8.45922 8.66611 9.33470 9.82849 11.29357 Molecular weight = 214.14amu Principal moments of inertia in cm(-1) A = 0.038464 B = 0.010549 C = 0.008997 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 727.781781 B = 2653.691887 C = 3111.376944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.116 3.884 3 C -0.134 4.134 4 O -0.382 6.382 5 C 0.065 3.935 6 C -0.192 4.192 7 C 0.118 3.882 8 H 0.047 0.953 9 O -0.525 6.525 10 C -0.095 4.095 11 H 0.070 0.930 12 C 0.030 3.970 13 C -0.489 4.489 14 H 0.078 0.922 15 C 0.047 3.953 16 N -0.908 5.908 17 Si 0.889 3.111 18 H -0.285 1.285 19 H -0.291 1.291 20 H -0.274 1.274 21 H 0.080 0.920 22 H 0.052 0.948 23 H 0.055 0.945 24 H 0.059 0.941 25 H 0.053 0.947 26 H 0.083 0.917 27 H 0.085 0.915 28 H 0.049 0.951 29 H 0.074 0.926 30 H 0.064 0.936 31 H 0.348 0.652 32 H 0.021 0.979 33 H 0.017 0.983 34 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.455 -4.741 -10.933 11.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.077 3.923 3 C -0.191 4.191 4 O -0.302 6.302 5 C -0.012 4.012 6 C -0.230 4.230 7 C 0.059 3.941 8 H 0.065 0.935 9 O -0.328 6.328 10 C -0.114 4.114 11 H 0.088 0.912 12 C -0.007 4.007 13 C -0.527 4.527 14 H 0.096 0.904 15 C -0.151 4.151 16 N -0.550 5.550 17 Si 0.718 3.282 18 H -0.211 1.211 19 H -0.218 1.218 20 H -0.199 1.199 21 H 0.099 0.901 22 H 0.071 0.929 23 H 0.074 0.926 24 H 0.078 0.922 25 H 0.072 0.928 26 H 0.102 0.898 27 H 0.103 0.897 28 H 0.067 0.933 29 H 0.092 0.908 30 H 0.083 0.917 31 H 0.193 0.807 32 H 0.039 0.961 33 H 0.035 0.965 34 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -0.160 -3.951 -10.810 11.510 hybrid contribution -0.112 -1.215 0.967 1.557 sum -0.272 -5.166 -9.843 11.119 Atomic orbital electron populations 1.22493 0.96186 1.02115 1.02751 1.21607 0.92949 0.93017 0.84689 1.21781 1.01653 0.93371 1.02324 1.87888 1.74102 1.23920 1.44304 1.22397 0.98392 0.82894 0.97512 1.23063 1.02798 0.99502 0.97646 1.21724 0.95887 0.92936 0.83527 0.93507 1.87065 1.75685 1.24358 1.45667 1.21857 1.01079 0.92370 0.96118 0.91157 1.19228 0.96013 0.95387 0.90083 1.21527 1.24609 1.16549 0.90005 0.90430 1.25011 0.95694 0.95438 0.98995 1.69970 1.34270 1.27799 1.22947 0.86629 0.78663 0.79902 0.82961 1.21138 1.21773 1.19934 0.90117 0.92866 0.92606 0.92210 0.92835 0.89849 0.89676 0.93291 0.90768 0.91743 0.80700 0.96096 0.96492 0.93505 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.98 7.52 37.16 0.28 -2.70 16 2 C 0.12 2.10 0.89 -90.57 -0.08 2.02 16 3 C -0.13 -2.30 8.56 37.15 0.32 -1.98 16 4 O -0.38 -6.62 10.23 -35.23 -0.36 -6.98 16 5 C 0.07 0.93 6.52 37.21 0.24 1.18 16 6 C -0.19 -2.89 5.77 -26.59 -0.15 -3.05 16 7 C 0.12 2.23 2.64 -26.55 -0.07 2.16 16 8 H 0.05 0.89 6.63 -51.93 -0.34 0.54 16 9 O -0.53 -10.69 10.03 -35.23 -0.35 -11.04 16 10 C -0.10 -2.01 1.49 -90.48 -0.13 -2.14 16 11 H 0.07 1.60 8.14 -51.93 -0.42 1.18 16 12 C 0.03 0.75 3.70 -27.88 -0.10 0.65 16 13 C -0.49 -13.91 7.94 -34.44 -0.27 -14.19 16 14 H 0.08 2.23 5.72 -52.49 -0.30 1.93 16 15 C 0.05 1.38 5.46 -17.82 -0.10 1.28 16 16 N -0.91 -27.62 13.29 55.43 0.74 -26.88 16 17 Si 0.89 22.53 29.54 -169.99 -5.02 17.51 16 18 H -0.28 -7.15 7.11 56.52 0.40 -6.75 16 19 H -0.29 -7.33 7.11 56.52 0.40 -6.93 16 20 H -0.27 -6.85 7.11 56.52 0.40 -6.45 16 21 H 0.08 1.47 6.50 -51.93 -0.34 1.13 16 22 H 0.05 0.78 8.14 -51.92 -0.42 0.36 16 23 H 0.06 0.89 4.98 -51.93 -0.26 0.63 16 24 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 25 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 26 H 0.08 1.51 6.39 -51.93 -0.33 1.18 16 27 H 0.09 1.02 8.14 -51.93 -0.42 0.60 16 28 H 0.05 0.66 6.35 -51.93 -0.33 0.33 16 29 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 30 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 31 H 0.35 5.33 9.09 45.56 0.41 5.75 16 32 H 0.02 0.56 6.27 -51.93 -0.33 0.23 16 33 H 0.02 0.45 6.67 -51.93 -0.35 0.11 16 34 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 LS Contribution 258.81 15.07 3.90 3.90 Total: -1.00 -31.83 258.81 -5.43 -37.26 By element: Atomic # 1 Polarization: 7.27 SS G_CDS: -4.25 Total: 3.02 kcal Atomic # 6 Polarization: -16.70 SS G_CDS: -0.07 Total: -16.78 kcal Atomic # 7 Polarization: -27.62 SS G_CDS: 0.74 Total: -26.88 kcal Atomic # 8 Polarization: -17.31 SS G_CDS: -0.71 Total: -18.02 kcal Atomic # 14 Polarization: 22.53 SS G_CDS: -5.02 Total: 17.51 kcal Total LS contribution 3.90 Total: 3.90 kcal Total: -31.83 -5.43 -37.26 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260854311.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.003 kcal (2) G-P(sol) polarization free energy of solvation -31.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds