Wall clock time and date at job start Mon Mar 30 2020 03:50:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 O 1.34373 * 125.77714 * 2 1 4 4 C 1.34303 * 109.47841 * 180.02562 * 3 2 1 5 5 Cl 1.73596 * 125.80269 * 180.02562 * 4 3 2 6 6 C 1.34657 * 108.39785 * 359.72377 * 4 3 2 7 7 C 1.34493 * 125.78122 * 180.02562 * 2 1 3 8 8 C 1.50703 * 126.57052 * 359.97438 * 7 2 1 9 9 H 1.08994 * 109.47275 * 325.00123 * 8 7 2 10 10 N 1.46898 * 109.46797 * 204.99638 * 8 7 2 11 11 C 1.50700 * 109.47148 * 84.99899 * 8 7 2 12 12 H 1.08002 * 119.99770 * 0.02562 * 11 8 7 13 13 C 1.37871 * 120.00083 * 179.97438 * 11 8 7 14 14 N 1.31514 * 120.00147 * 0.02562 * 13 11 8 15 15 Si 1.86803 * 120.00278 * 180.02562 * 13 11 8 16 16 H 1.48494 * 109.47228 * 179.97438 * 15 13 11 17 17 H 1.48501 * 109.46793 * 300.00001 * 15 13 11 18 18 H 1.48500 * 109.47000 * 60.00094 * 15 13 11 19 19 H 1.09006 * 109.47210 * 269.97227 * 1 2 3 20 20 H 1.09002 * 109.47149 * 29.97427 * 1 2 3 21 21 H 1.08998 * 109.47288 * 149.97297 * 1 2 3 22 22 H 1.07995 * 126.59115 * 180.25902 * 6 4 3 23 23 H 1.00892 * 111.00332 * 300.00256 * 10 8 7 24 24 H 1.00905 * 110.99665 * 63.96030 * 10 8 7 25 25 H 0.97005 * 119.99661 * 359.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.2926 1.0902 0.0000 4 6 3.5816 0.7132 -0.0006 5 17 4.9515 1.7796 -0.0002 6 6 3.6310 -0.6324 0.0052 7 6 2.2933 -1.0911 -0.0005 8 6 1.8365 -2.5272 -0.0006 9 1 0.9244 -2.6183 0.5891 10 7 2.8844 -3.3744 0.5841 11 6 1.5656 -2.9681 -1.4160 12 1 1.7103 -2.2775 -2.2337 13 6 1.1342 -4.2532 -1.6671 14 7 0.9584 -5.0943 -0.6714 15 14 0.7991 -4.8000 -3.4216 16 1 0.3500 -6.2154 -3.4218 17 1 -0.2604 -3.9439 -4.0130 18 1 2.0420 -4.6755 -4.2247 19 1 -0.3634 -0.0005 1.0277 20 1 -0.3633 0.8902 -0.5134 21 1 -0.3634 -0.8897 -0.5142 22 1 4.5211 -1.2439 0.0103 23 1 3.7408 -3.3073 0.0549 24 1 3.0391 -3.1410 1.5535 25 1 1.1328 -4.8105 0.2397 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261251704.mol2 25 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:50:34 Heat of formation + Delta-G solvation = 2.467303 kcal Electronic energy + Delta-G solvation = -12353.301505 eV Core-core repulsion = 9973.275310 eV Total energy + Delta-G solvation = -2380.026195 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 215.045 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -42.16829 -36.77516 -35.55063 -32.31361 -31.33521 -30.50842 -26.39348 -25.18003 -22.53091 -20.64995 -19.40819 -17.19091 -16.55614 -15.88566 -14.70023 -14.28353 -13.70362 -13.44692 -12.95917 -12.75447 -12.68285 -11.86081 -11.81365 -11.78329 -11.43679 -10.98499 -10.73104 -10.31914 -10.04352 -9.45343 -8.57126 -8.33591 -7.66460 -7.54709 -6.18248 -4.01910 1.48166 1.96959 3.09876 3.47863 3.49818 3.68100 3.89630 4.60633 5.35315 5.37850 5.44985 5.77909 5.87893 5.96157 6.13024 6.21960 6.38749 6.49259 6.99723 7.12576 7.47120 7.97972 8.30272 8.65157 8.76448 9.05257 9.81497 11.21146 Molecular weight = 215.05amu Principal moments of inertia in cm(-1) A = 0.039537 B = 0.008577 C = 0.008319 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 708.030432 B = 3263.928212 C = 3365.001424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 C -0.017 4.017 3 O -0.180 6.180 4 C 0.002 3.998 5 Cl 0.003 6.997 6 C -0.163 4.163 7 C -0.153 4.153 8 C 0.267 3.733 9 H 0.040 0.960 10 N -0.828 5.828 11 C -0.608 4.608 12 H 0.045 0.955 13 C 0.039 3.961 14 N -0.890 5.890 15 Si 1.063 2.937 16 H -0.284 1.284 17 H -0.290 1.290 18 H -0.290 1.290 19 H 0.072 0.928 20 H 0.067 0.933 21 H 0.104 0.896 22 H 0.148 0.852 23 H 0.326 0.674 24 H 0.302 0.698 25 H 0.290 0.710 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.119 10.233 2.031 10.889 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.067 4.067 3 O -0.080 6.080 4 C -0.073 4.073 5 Cl 0.031 6.969 6 C -0.183 4.183 7 C -0.157 4.157 8 C 0.158 3.842 9 H 0.058 0.942 10 N -0.355 5.355 11 C -0.646 4.646 12 H 0.063 0.937 13 C -0.171 4.171 14 N -0.524 5.524 15 Si 0.892 3.108 16 H -0.209 1.209 17 H -0.217 1.217 18 H -0.217 1.217 19 H 0.091 0.909 20 H 0.086 0.914 21 H 0.123 0.877 22 H 0.166 0.834 23 H 0.139 0.861 24 H 0.112 0.888 25 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 2.141 8.691 0.979 9.005 hybrid contribution 1.542 2.444 0.954 3.044 sum 3.684 11.136 1.932 11.887 Atomic orbital electron populations 1.20296 0.84633 1.04405 1.02816 1.22285 0.93643 0.82554 1.08177 1.83806 1.14709 1.36242 1.73231 1.22065 0.80975 0.89606 1.14697 1.98371 1.34039 1.66986 1.97485 1.21340 0.99099 0.91183 1.06728 1.21944 0.91083 1.00202 1.02430 1.17828 0.90425 0.79350 0.96617 0.94228 1.59424 1.12259 1.59986 1.03799 1.21667 1.52194 1.00318 0.90454 0.93671 1.25608 0.93436 0.92884 1.05185 1.70562 1.42323 1.37442 1.02105 0.83653 0.76330 0.76136 0.74669 1.20902 1.21659 1.21695 0.90898 0.91422 0.87748 0.83407 0.86123 0.88780 0.89782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.06 10.11 36.00 0.36 -0.70 15 2 C -0.02 -0.34 7.32 -35.63 -0.26 -0.60 15 3 O -0.18 -3.46 10.65 5.52 0.06 -3.40 15 4 C 0.00 0.04 7.93 29.46 0.23 0.27 15 5 Cl 0.00 0.04 29.30 -51.86 -1.52 -1.48 15 6 C -0.16 -3.14 10.14 -39.64 -0.40 -3.54 15 7 C -0.15 -3.27 5.19 -104.74 -0.54 -3.81 15 8 C 0.27 6.43 2.23 -70.02 -0.16 6.27 15 9 H 0.04 1.02 7.88 -51.93 -0.41 0.61 15 10 N -0.83 -18.71 7.57 -6.65 -0.05 -18.76 15 11 C -0.61 -16.53 8.71 -34.44 -0.30 -16.83 15 12 H 0.04 1.27 7.74 -52.49 -0.41 0.86 15 13 C 0.04 1.08 5.39 -17.82 -0.10 0.98 15 14 N -0.89 -26.28 13.51 55.43 0.75 -25.53 15 15 Si 1.06 24.88 29.90 -169.99 -5.08 19.80 15 16 H -0.28 -6.68 7.11 56.52 0.40 -6.28 15 17 H -0.29 -6.48 7.11 56.52 0.40 -6.08 15 18 H -0.29 -6.62 7.11 56.52 0.40 -6.22 15 19 H 0.07 1.03 8.14 -51.93 -0.42 0.61 15 20 H 0.07 0.94 8.14 -51.93 -0.42 0.52 15 21 H 0.10 1.86 7.87 -51.93 -0.41 1.45 15 22 H 0.15 2.61 7.55 -52.49 -0.40 2.22 15 23 H 0.33 7.19 8.11 -39.30 -0.32 6.87 15 24 H 0.30 6.03 9.06 -39.29 -0.36 5.67 15 25 H 0.29 8.53 6.39 -40.82 -0.26 8.27 15 LS Contribution 240.18 15.07 3.62 3.62 Total: -1.00 -29.61 240.18 -5.58 -35.20 By element: Atomic # 1 Polarization: 10.70 SS G_CDS: -2.20 Total: 8.50 kcal Atomic # 6 Polarization: -16.78 SS G_CDS: -1.16 Total: -17.94 kcal Atomic # 7 Polarization: -44.99 SS G_CDS: 0.70 Total: -44.29 kcal Atomic # 8 Polarization: -3.46 SS G_CDS: 0.06 Total: -3.40 kcal Atomic # 14 Polarization: 24.88 SS G_CDS: -5.08 Total: 19.80 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -1.52 Total: -1.48 kcal Total LS contribution 3.62 Total: 3.62 kcal Total: -29.61 -5.58 -35.20 kcal The number of atoms in the molecule is 25 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261251704.mol2 25 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.667 kcal (2) G-P(sol) polarization free energy of solvation -29.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.585 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.200 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds