Wall clock time and date at job start Mon Mar 30 2020 02:46:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.50701 * 115.54722 * 2 1 4 4 O 1.21277 * 120.00117 * 214.42001 * 3 2 1 5 5 N 1.34778 * 120.00218 * 34.41732 * 3 2 1 6 6 C 1.46497 * 120.00209 * 179.97438 * 5 3 2 7 7 C 1.52998 * 109.47102 * 180.02562 * 6 5 3 8 8 C 1.50701 * 109.47110 * 180.02562 * 7 6 5 9 9 H 1.07999 * 119.99667 * 359.97438 * 8 7 6 10 10 C 1.37874 * 119.99847 * 179.97438 * 8 7 6 11 11 N 1.31512 * 120.00238 * 0.02562 * 10 8 7 12 12 Si 1.86802 * 119.99735 * 179.97438 * 10 8 7 13 13 H 1.48503 * 109.46747 * 90.00454 * 12 10 8 14 14 H 1.48499 * 109.47124 * 210.00142 * 12 10 8 15 15 H 1.48494 * 109.47472 * 330.00465 * 12 10 8 16 16 C 1.53004 * 117.49755 * 214.33196 * 2 1 3 17 17 C 1.52994 * 117.50121 * 145.70951 * 2 1 3 18 18 H 1.09000 * 117.50003 * 214.98206 * 17 2 1 19 19 F 1.39909 * 117.49784 * 0.02562 * 17 2 1 20 20 H 1.09001 * 109.47002 * 205.66706 * 1 2 3 21 21 H 1.08993 * 109.46955 * 325.67143 * 1 2 3 22 22 H 1.09000 * 109.47050 * 85.66972 * 1 2 3 23 23 H 0.97001 * 119.99890 * 359.97438 * 5 3 2 24 24 H 1.09002 * 109.47192 * 299.99908 * 6 5 3 25 25 H 1.09003 * 109.47147 * 59.99992 * 6 5 3 26 26 H 1.09002 * 109.46736 * 299.99837 * 7 6 5 27 27 H 1.08989 * 109.47455 * 59.99748 * 7 6 5 28 28 H 0.97006 * 119.99785 * 180.02562 * 11 10 8 29 29 H 1.08991 * 117.49774 * 359.97438 * 16 2 1 30 30 H 1.08997 * 117.49444 * 144.99595 * 16 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1800 1.3597 0.0000 4 8 3.2232 1.5332 -0.5937 5 7 1.6019 2.3829 0.6597 6 6 2.2339 3.7045 0.6602 7 6 1.3805 4.6777 1.4759 8 6 2.0304 6.0374 1.4759 9 1 2.9594 6.1918 0.9473 10 6 1.4389 7.0842 2.1507 11 7 0.3079 6.8960 2.7948 12 14 2.2449 8.7694 2.1512 13 1 1.7448 9.5575 0.9961 14 1 1.9126 9.4766 3.4140 15 1 3.7177 8.6138 2.0438 16 6 2.2365 -1.1207 -0.7654 17 6 2.2365 -1.1212 0.7646 18 1 3.1716 -0.8755 1.2679 19 9 1.4340 -2.0684 1.4098 20 1 -0.3633 -0.9263 0.4451 21 1 -0.3633 0.8486 0.5795 22 1 -0.3633 0.0776 -1.0247 23 1 0.7673 2.2443 1.1342 24 1 3.2268 3.6323 1.1043 25 1 2.3197 4.0667 -0.3644 26 1 0.3875 4.7500 1.0322 27 1 1.2952 4.3155 2.5003 28 1 -0.1084 7.6326 3.2692 29 1 1.6113 -1.8582 -1.2686 30 1 3.1713 -0.8746 -1.2689 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000399319548.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:46:42 Heat of formation + Delta-G solvation = -77.849035 kcal Electronic energy + Delta-G solvation = -14034.161941 eV Core-core repulsion = 11358.149688 eV Total energy + Delta-G solvation = -2676.012253 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 215.106 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -47.82432 -39.77220 -36.34075 -34.91714 -32.90073 -29.99525 -28.52714 -25.17468 -22.91661 -22.51268 -20.96539 -19.29224 -17.56396 -16.47827 -16.19220 -15.46998 -15.03061 -14.95839 -14.52249 -14.38895 -13.39421 -13.19684 -12.95049 -12.47891 -12.45062 -12.28938 -12.01649 -11.23293 -11.06280 -10.67773 -10.52208 -10.38217 -10.10236 -9.81819 -9.49134 -9.22990 -8.60157 -8.40111 -6.11793 -4.14981 2.54874 3.28012 3.33598 3.36097 3.41381 3.56315 4.05677 4.32526 4.39306 4.60375 4.81931 4.93311 5.25366 5.41759 5.57705 5.61157 5.63051 5.92147 6.02135 6.28639 6.29100 6.67944 6.83032 7.47630 7.57501 7.85676 7.92547 8.23843 8.53603 8.90872 9.50128 10.99802 Molecular weight = 215.11amu Principal moments of inertia in cm(-1) A = 0.061004 B = 0.005395 C = 0.005180 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 458.876154 B = 5188.960361 C = 5403.708928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.174 4.174 3 C 0.542 3.458 4 O -0.547 6.547 5 N -0.713 5.713 6 C 0.121 3.879 7 C 0.012 3.988 8 C -0.523 4.523 9 H 0.059 0.941 10 C 0.059 3.941 11 N -0.894 5.894 12 Si 0.897 3.103 13 H -0.279 1.279 14 H -0.286 1.286 15 H -0.272 1.272 16 C -0.154 4.154 17 C 0.043 3.957 18 H 0.138 0.862 19 F -0.179 7.179 20 H 0.072 0.928 21 H 0.070 0.930 22 H 0.070 0.930 23 H 0.399 0.601 24 H 0.057 0.943 25 H 0.058 0.942 26 H 0.023 0.977 27 H 0.023 0.977 28 H 0.262 0.738 29 H 0.112 0.888 30 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.011 -14.343 -3.977 14.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.178 4.178 3 C 0.326 3.674 4 O -0.425 6.425 5 N -0.363 5.363 6 C -0.001 4.001 7 C -0.026 4.026 8 C -0.561 4.561 9 H 0.078 0.922 10 C -0.142 4.142 11 N -0.533 5.533 12 Si 0.725 3.275 13 H -0.205 1.205 14 H -0.211 1.211 15 H -0.197 1.197 16 C -0.192 4.192 17 C 0.007 3.993 18 H 0.155 0.845 19 F -0.159 7.159 20 H 0.090 0.910 21 H 0.089 0.911 22 H 0.089 0.911 23 H 0.234 0.766 24 H 0.076 0.924 25 H 0.076 0.924 26 H 0.041 0.959 27 H 0.041 0.959 28 H 0.072 0.928 29 H 0.130 0.870 30 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.605 -14.105 -4.255 14.746 hybrid contribution -0.217 0.882 0.367 0.980 sum 0.387 -13.223 -3.888 13.788 Atomic orbital electron populations 1.21326 0.89741 1.03444 1.03131 1.22333 0.97314 0.90823 1.07350 1.19215 0.84496 0.84521 0.79160 1.90675 1.23390 1.83997 1.44472 1.46308 1.27019 1.10985 1.51991 1.21784 0.97325 0.79863 1.01169 1.19332 0.95182 0.93059 0.94980 1.21039 1.08406 0.93966 1.32721 0.92227 1.24995 0.94921 0.99248 0.95083 1.69955 1.17673 1.32267 1.33374 0.86503 0.79814 0.83717 0.77470 1.20536 1.21142 1.19719 1.23734 1.03838 0.98510 0.93080 1.22182 0.94430 0.90086 0.92614 0.84474 1.92795 1.75357 1.65045 1.82678 0.90956 0.91122 0.91086 0.76606 0.92414 0.92371 0.95891 0.95872 0.92803 0.86998 0.85898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.28 9.76 37.16 0.36 -0.92 16 2 C -0.17 -2.22 2.61 -155.66 -0.41 -2.63 16 3 C 0.54 9.10 7.39 -10.98 -0.08 9.02 16 4 O -0.55 -10.96 16.26 5.56 0.09 -10.87 16 5 N -0.71 -12.43 5.45 -60.30 -0.33 -12.76 16 6 C 0.12 2.54 5.61 -4.04 -0.02 2.52 16 7 C 0.01 0.29 5.09 -27.88 -0.14 0.15 16 8 C -0.52 -14.41 9.11 -34.44 -0.31 -14.72 16 9 H 0.06 1.61 7.74 -52.49 -0.41 1.20 16 10 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 11 N -0.89 -26.00 13.29 55.43 0.74 -25.26 16 12 Si 0.90 21.25 29.54 -169.99 -5.02 16.23 16 13 H -0.28 -6.53 7.11 56.52 0.40 -6.12 16 14 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 15 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 16 C -0.15 -1.67 9.75 -26.73 -0.26 -1.93 16 17 C 0.04 0.50 7.54 -26.73 -0.20 0.30 16 18 H 0.14 1.49 8.14 -51.93 -0.42 1.07 16 19 F -0.18 -2.18 16.50 2.25 0.04 -2.14 16 20 H 0.07 0.72 7.10 -51.93 -0.37 0.35 16 21 H 0.07 0.75 6.38 -51.93 -0.33 0.42 16 22 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 23 H 0.40 6.14 6.77 -40.82 -0.28 5.86 16 24 H 0.06 1.26 8.14 -51.93 -0.42 0.83 16 25 H 0.06 1.27 8.14 -51.93 -0.42 0.85 16 26 H 0.02 0.58 8.14 -51.93 -0.42 0.16 16 27 H 0.02 0.59 8.14 -51.94 -0.42 0.17 16 28 H 0.26 7.20 8.31 -40.82 -0.34 6.86 16 29 H 0.11 0.99 8.14 -51.93 -0.42 0.57 16 30 H 0.12 1.39 7.67 -51.93 -0.40 0.99 16 LS Contribution 265.65 15.07 4.00 4.00 Total: -1.00 -30.68 265.65 -5.52 -36.20 By element: Atomic # 1 Polarization: 5.14 SS G_CDS: -3.88 Total: 1.26 kcal Atomic # 6 Polarization: -5.49 SS G_CDS: -1.16 Total: -6.66 kcal Atomic # 7 Polarization: -38.43 SS G_CDS: 0.41 Total: -38.02 kcal Atomic # 8 Polarization: -10.96 SS G_CDS: 0.09 Total: -10.87 kcal Atomic # 9 Polarization: -2.18 SS G_CDS: 0.04 Total: -2.14 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Total LS contribution 4.00 Total: 4.00 kcal Total: -30.68 -5.52 -36.20 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000399319548.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.648 kcal (2) G-P(sol) polarization free energy of solvation -30.680 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.201 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds