Wall clock time and date at job start Mon Mar 30 2020 03:07:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 F 1.39903 * 109.46929 * 2 1 4 4 C 1.50700 * 109.46982 * 119.99967 * 2 1 3 5 5 H 1.08000 * 119.99727 * 119.99643 * 4 2 1 6 6 C 1.37870 * 119.99833 * 299.99916 * 4 2 1 7 7 N 1.31521 * 120.00033 * 180.02562 * 6 4 2 8 8 Si 1.86796 * 120.00503 * 359.97438 * 6 4 2 9 9 H 1.48505 * 109.47168 * 89.99960 * 8 6 4 10 10 H 1.48499 * 109.47433 * 209.99768 * 8 6 4 11 11 H 1.48499 * 109.47180 * 330.00210 * 8 6 4 12 12 C 1.52997 * 109.47168 * 240.00213 * 2 1 3 13 13 N 1.46894 * 109.47435 * 185.27820 * 12 2 1 14 14 C 1.47017 * 110.99966 * 286.62831 * 13 12 2 15 15 C 1.53095 * 109.26160 * 177.60486 * 14 13 12 16 16 O 1.43017 * 109.25639 * 56.84839 * 15 14 13 17 17 C 1.43016 * 113.73848 * 301.33094 * 16 15 14 18 18 C 1.47015 * 111.00342 * 162.99197 * 13 12 2 19 19 H 1.09001 * 109.47226 * 65.19597 * 1 2 3 20 20 H 1.09004 * 109.47253 * 305.20433 * 1 2 3 21 21 H 1.08996 * 109.47117 * 185.19883 * 1 2 3 22 22 H 0.96995 * 120.00239 * 180.02562 * 7 6 4 23 23 H 1.09001 * 109.46912 * 305.27966 * 12 2 1 24 24 H 1.09001 * 109.47489 * 65.27293 * 12 2 1 25 25 H 1.09003 * 109.50389 * 297.54076 * 14 13 12 26 26 H 1.09006 * 109.50728 * 57.66852 * 14 13 12 27 27 H 1.09006 * 109.50638 * 296.91554 * 15 14 13 28 28 H 1.08998 * 109.54686 * 176.80567 * 15 14 13 29 29 H 1.08999 * 109.50732 * 298.73528 * 17 16 15 30 30 H 1.09002 * 109.54330 * 178.62834 * 17 16 15 31 31 H 1.08998 * 109.50599 * 302.32929 * 18 13 12 32 32 H 1.09001 * 109.50272 * 62.45684 * 18 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 9 1.9963 1.3190 0.0000 4 6 2.0323 -0.7104 1.2305 5 1 2.6532 -1.5885 1.1314 6 6 1.6992 -0.2393 2.4827 7 7 2.1380 -0.8590 3.5566 8 14 0.6259 1.2799 2.6541 9 1 -0.8020 0.8746 2.6993 10 1 0.9772 1.9953 3.9071 11 1 0.8492 2.1774 1.4923 12 6 2.0400 -0.7212 -1.2492 13 7 3.5034 -0.8325 -1.1873 14 6 4.1419 0.4677 -1.4389 15 6 5.6598 0.3191 -1.3061 16 8 6.1156 -0.6917 -2.2094 17 6 5.5147 -1.9712 -1.9924 18 6 3.9952 -1.8458 -2.1321 19 1 -0.3634 0.4311 -0.9329 20 1 -0.3634 0.5925 0.8397 21 1 -0.3633 -1.0234 0.0931 22 1 1.9034 -0.5278 4.4375 23 1 1.6015 -1.7179 -1.2978 24 1 1.7559 -0.1557 -2.1367 25 1 3.8958 0.8051 -2.4457 26 1 3.7825 1.1963 -0.7121 27 1 5.9095 0.0335 -0.2842 28 1 6.1414 1.2667 -1.5472 29 1 5.7602 -2.3234 -0.9905 30 1 5.8907 -2.6804 -2.7298 31 1 3.5289 -2.8060 -1.9114 32 1 3.7469 -1.5453 -3.1500 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261311863.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:07:30 Heat of formation + Delta-G solvation = -74.625333 kcal Electronic energy + Delta-G solvation = -15890.867311 eV Core-core repulsion = 13187.683370 eV Total energy + Delta-G solvation = -2703.183942 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 217.122 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -46.38317 -38.99447 -35.55989 -33.21659 -31.23221 -30.75067 -27.57080 -25.18024 -23.90364 -23.54759 -20.02939 -19.62834 -16.99003 -16.11790 -15.77366 -15.28262 -14.75986 -14.58636 -14.45439 -13.92483 -13.25993 -13.12834 -12.94534 -12.37216 -12.21892 -12.02429 -11.43015 -11.20284 -11.01557 -10.95204 -10.46014 -10.32917 -10.19897 -9.92391 -9.35324 -8.93867 -8.75808 -8.58547 -7.64730 -6.09534 -4.16265 3.29241 3.43661 3.53444 4.14269 4.35247 4.44120 5.22362 5.26467 5.41655 5.45046 5.49908 5.65670 5.79167 5.79849 5.91566 5.99439 6.05048 6.11343 6.17539 6.26716 6.35933 6.39185 6.51614 6.81633 7.34532 7.41471 7.51464 7.63636 7.67163 8.46637 9.03047 9.52045 11.02108 Molecular weight = 217.12amu Principal moments of inertia in cm(-1) A = 0.040085 B = 0.010432 C = 0.010006 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 698.351940 B = 2683.511846 C = 2797.628897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C 0.204 3.796 3 F -0.234 7.234 4 C -0.519 4.519 5 H 0.093 0.907 6 C 0.080 3.920 7 N -0.891 5.891 8 Si 0.871 3.129 9 H -0.286 1.286 10 H -0.299 1.299 11 H -0.243 1.243 12 C 0.059 3.941 13 N -0.509 5.509 14 C 0.009 3.991 15 C 0.064 3.936 16 O -0.395 6.395 17 C 0.066 3.934 18 C 0.017 3.983 19 H 0.038 0.962 20 H 0.052 0.948 21 H 0.071 0.929 22 H 0.264 0.736 23 H 0.080 0.920 24 H 0.021 0.979 25 H 0.026 0.974 26 H 0.114 0.886 27 H 0.063 0.937 28 H 0.090 0.910 29 H 0.061 0.939 30 H 0.089 0.911 31 H 0.082 0.918 32 H 0.030 0.970 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.924 0.313 -10.102 10.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C 0.185 3.815 3 F -0.215 7.215 4 C -0.557 4.557 5 H 0.111 0.889 6 C -0.124 4.124 7 N -0.527 5.527 8 Si 0.701 3.299 9 H -0.213 1.213 10 H -0.227 1.227 11 H -0.166 1.166 12 C -0.069 4.069 13 N -0.233 5.233 14 C -0.119 4.119 15 C -0.012 4.012 16 O -0.314 6.314 17 C -0.011 4.011 18 C -0.111 4.111 19 H 0.057 0.943 20 H 0.070 0.930 21 H 0.090 0.910 22 H 0.074 0.926 23 H 0.098 0.902 24 H 0.039 0.961 25 H 0.044 0.956 26 H 0.132 0.868 27 H 0.081 0.919 28 H 0.109 0.891 29 H 0.079 0.921 30 H 0.108 0.892 31 H 0.100 0.900 32 H 0.048 0.952 Dipole moment (debyes) X Y Z Total from point charges 2.222 0.224 -9.584 9.841 hybrid contribution -1.117 1.002 -0.305 1.531 sum 1.105 1.226 -9.889 10.026 Atomic orbital electron populations 1.22574 0.97650 1.02526 0.99936 1.18999 0.90286 0.75971 0.96203 1.92626 1.89946 1.41371 1.97550 1.21088 1.32983 1.14234 0.87360 0.88901 1.24990 0.95124 0.96345 0.95896 1.69902 1.44647 1.40257 0.97933 0.87299 0.79826 0.84945 0.77857 1.21314 1.22730 1.16616 1.22486 0.87194 1.00853 0.96339 1.62033 1.05847 1.06303 1.49161 1.23104 0.94907 0.93243 1.00620 1.22692 0.93579 0.91034 0.93938 1.87882 1.66316 1.19460 1.57749 1.22601 0.91582 0.85320 1.01614 1.22777 0.96612 0.97488 0.94244 0.94286 0.92961 0.91038 0.92619 0.90185 0.96096 0.95560 0.86845 0.91887 0.89148 0.92107 0.89245 0.89994 0.95168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -3.55 8.36 37.16 0.31 -3.24 16 2 C 0.20 4.74 0.92 -91.77 -0.08 4.65 16 3 F -0.23 -5.68 11.12 2.25 0.03 -5.66 16 4 C -0.52 -14.21 8.47 -34.44 -0.29 -14.50 16 5 H 0.09 2.77 7.74 -52.49 -0.41 2.36 16 6 C 0.08 2.28 5.45 -17.82 -0.10 2.18 16 7 N -0.89 -27.02 13.96 55.43 0.77 -26.24 16 8 Si 0.87 21.96 23.93 -169.99 -4.07 17.89 16 9 H -0.29 -6.97 6.92 56.52 0.39 -6.58 16 10 H -0.30 -7.65 7.11 56.52 0.40 -7.25 16 11 H -0.24 -5.99 5.48 56.52 0.31 -5.68 16 12 C 0.06 1.18 4.32 -3.83 -0.02 1.16 16 13 N -0.51 -9.97 3.92 -234.31 -0.92 -10.89 16 14 C 0.01 0.17 5.33 -3.71 -0.02 0.15 16 15 C 0.06 1.07 7.01 37.21 0.26 1.33 16 16 O -0.40 -6.63 10.83 -35.23 -0.38 -7.01 16 17 C 0.07 0.99 7.01 37.21 0.26 1.25 16 18 C 0.02 0.28 5.61 -3.71 -0.02 0.26 16 19 H 0.04 0.70 8.14 -51.93 -0.42 0.28 16 20 H 0.05 1.17 3.42 -51.93 -0.18 0.99 16 21 H 0.07 1.41 8.14 -51.93 -0.42 0.99 16 22 H 0.26 7.56 8.31 -40.82 -0.34 7.22 16 23 H 0.08 1.49 7.91 -51.93 -0.41 1.08 16 24 H 0.02 0.39 8.03 -51.93 -0.42 -0.03 16 25 H 0.03 0.47 8.14 -51.93 -0.42 0.04 16 26 H 0.11 2.34 5.43 -51.93 -0.28 2.06 16 27 H 0.06 1.12 8.14 -51.93 -0.42 0.69 16 28 H 0.09 1.28 8.14 -51.93 -0.42 0.86 16 29 H 0.06 0.96 8.14 -51.93 -0.42 0.54 16 30 H 0.09 1.08 8.14 -51.93 -0.42 0.66 16 31 H 0.08 1.22 8.03 -51.93 -0.42 0.81 16 32 H 0.03 0.47 8.14 -51.93 -0.42 0.04 16 LS Contribution 249.76 15.07 3.76 3.76 Total: -1.00 -30.58 249.76 -5.23 -35.81 By element: Atomic # 1 Polarization: 3.81 SS G_CDS: -4.73 Total: -0.92 kcal Atomic # 6 Polarization: -7.05 SS G_CDS: 0.30 Total: -6.75 kcal Atomic # 7 Polarization: -36.99 SS G_CDS: -0.15 Total: -37.13 kcal Atomic # 8 Polarization: -6.63 SS G_CDS: -0.38 Total: -7.01 kcal Atomic # 9 Polarization: -5.68 SS G_CDS: 0.03 Total: -5.66 kcal Atomic # 14 Polarization: 21.96 SS G_CDS: -4.07 Total: 17.89 kcal Total LS contribution 3.76 Total: 3.76 kcal Total: -30.58 -5.23 -35.81 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261311863.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.811 kcal (2) G-P(sol) polarization free energy of solvation -30.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.391 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds