Wall clock time and date at job start Mon Mar 30 2020 02:28:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30844 * 1 3 3 Si 1.86793 * 120.00462 * 2 1 4 4 H 1.48499 * 109.47329 * 85.55125 * 3 2 1 5 5 H 1.48494 * 109.47389 * 205.55689 * 3 2 1 6 6 H 1.48506 * 109.46640 * 325.55550 * 3 2 1 7 7 C 1.39950 * 119.99693 * 179.97438 * 2 1 3 8 8 H 1.07997 * 119.99737 * 163.52657 * 7 2 1 9 9 C 1.41328 * 120.00016 * 343.51988 * 7 2 1 10 10 C 1.41061 * 121.04386 * 335.55609 * 9 7 2 11 11 N 1.31933 * 118.81157 * 179.75861 * 10 9 7 12 12 C 1.32169 * 121.10541 * 0.52990 * 11 10 9 13 13 Cl 1.73606 * 118.81962 * 179.69893 * 12 11 10 14 14 N 1.32095 * 122.35676 * 359.71971 * 12 11 10 15 15 C 1.32082 * 121.04684 * 0.02562 * 14 12 11 16 16 Cl 1.73593 * 120.61865 * 179.97438 * 15 14 12 17 17 H 0.96996 * 119.99661 * 0.02562 * 1 2 3 18 18 H 1.07998 * 120.59911 * 0.02562 * 10 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3084 0.0000 0.0000 3 14 2.2425 1.6176 0.0000 4 1 2.3960 2.1006 1.3958 5 1 3.5838 1.4147 -0.6040 6 1 1.4901 2.6236 -0.7919 7 6 2.0081 -1.2120 0.0005 8 1 3.0548 -1.2314 -0.2647 9 6 1.3450 -2.4106 0.3483 10 6 0.1933 -2.3949 1.1626 11 7 -0.3937 -3.5395 1.4560 12 6 0.0861 -4.6871 1.0092 13 17 -0.7290 -6.1587 1.4382 14 7 1.1638 -4.7545 0.2484 15 6 1.8185 -3.6627 -0.1037 16 17 3.2340 -3.7643 -1.1034 17 1 -0.4849 0.8400 -0.0004 18 1 -0.2035 -1.4623 1.5357 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044368426.mol2 18 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:28:22 Heat of formation + Delta-G solvation = 9.700870 kcal Electronic energy + Delta-G solvation = -10287.923870 eV Core-core repulsion = 7984.516932 eV Total energy + Delta-G solvation = -2303.406938 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 217.971 amu Computer time = 0.09 seconds Orbital eigenvalues (eV) -39.28593 -35.84987 -35.50072 -34.55599 -32.22951 -30.63250 -26.11866 -23.08312 -22.28886 -17.92229 -16.78511 -16.60594 -15.34118 -14.02705 -13.80072 -13.39803 -12.65794 -12.21802 -11.66878 -11.62360 -11.26855 -10.87843 -10.61716 -10.49966 -10.34526 -9.79774 -9.57610 -9.26419 -8.28701 -8.01920 -7.35934 -4.94812 2.08238 2.34387 2.53314 2.82605 2.87800 2.88826 3.17752 3.56469 4.16167 5.12707 5.68678 5.99576 6.35464 6.58216 6.82127 7.22715 7.77955 7.81766 8.09461 8.35557 9.23707 9.56888 Molecular weight = 217.97amu Principal moments of inertia in cm(-1) A = 0.037336 B = 0.010832 C = 0.008571 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 749.770551 B = 2584.366240 C = 3265.918075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.766 5.766 2 C 0.069 3.931 3 Si 0.927 3.073 4 H -0.261 1.261 5 H -0.255 1.255 6 H -0.271 1.271 7 C -0.401 4.401 8 H 0.101 0.899 9 C 0.028 3.972 10 C 0.101 3.899 11 N -0.484 5.484 12 C 0.217 3.783 13 Cl -0.039 7.039 14 N -0.475 5.475 15 C 0.096 3.904 16 Cl -0.059 7.059 17 H 0.296 0.704 18 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.087 1.425 0.342 2.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.389 5.389 2 C -0.154 4.154 3 Si 0.749 3.251 4 H -0.186 1.186 5 H -0.178 1.178 6 H -0.196 1.196 7 C -0.429 4.429 8 H 0.119 0.881 9 C 0.019 3.981 10 C -0.073 4.073 11 N -0.199 5.199 12 C -0.070 4.070 13 Cl -0.012 7.012 14 N -0.192 5.192 15 C -0.079 4.079 16 Cl -0.031 7.031 17 H 0.108 0.892 18 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges 1.425 0.488 0.518 1.593 hybrid contribution 0.726 1.195 -0.395 1.453 sum 2.151 1.683 0.123 2.734 Atomic orbital electron populations 1.69708 1.07998 1.31283 1.29865 1.26223 0.95025 1.02555 0.91606 0.85949 0.80608 0.78669 0.79851 1.18577 1.17789 1.19587 1.19821 0.98463 0.89800 1.34846 0.88064 1.18963 0.94257 0.92516 0.92355 1.23400 0.94070 0.94045 0.95814 1.67235 1.31872 0.98011 1.22780 1.21230 0.93993 0.86760 1.05008 1.98274 1.77869 1.32828 1.92187 1.66132 1.07092 1.33966 1.11971 1.21495 0.94415 0.89094 1.02871 1.98267 1.38419 1.98427 1.68026 0.89247 0.80822 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.77 -16.87 10.94 55.55 0.61 -16.26 13 2 C 0.07 1.46 5.20 -17.33 -0.09 1.37 13 3 Si 0.93 15.82 29.59 -169.99 -5.03 10.79 13 4 H -0.26 -4.40 7.11 56.52 0.40 -4.00 13 5 H -0.25 -4.34 7.11 56.52 0.40 -3.94 13 6 H -0.27 -4.55 7.11 56.52 0.40 -4.15 13 7 C -0.40 -9.20 8.61 -37.77 -0.33 -9.53 13 8 H 0.10 2.23 7.21 -52.49 -0.38 1.85 13 9 C 0.03 0.68 5.60 -106.49 -0.60 0.08 13 10 C 0.10 2.50 9.99 -16.44 -0.16 2.34 13 11 N -0.48 -12.10 10.37 -11.00 -0.11 -12.22 13 12 C 0.22 5.33 8.17 -91.57 -0.75 4.59 13 13 Cl -0.04 -0.80 29.26 -51.86 -1.52 -2.32 13 14 N -0.47 -11.93 10.37 -8.12 -0.08 -12.02 13 15 C 0.10 2.37 7.41 -16.29 -0.12 2.25 13 16 Cl -0.06 -1.26 27.93 -51.86 -1.45 -2.70 13 17 H 0.30 5.79 8.30 -40.82 -0.34 5.45 13 18 H 0.18 4.14 6.23 -52.49 -0.33 3.82 13 LS Contribution 206.51 15.07 3.11 3.11 Total: -1.00 -25.13 206.51 -6.36 -31.48 By element: Atomic # 1 Polarization: -1.13 SS G_CDS: 0.16 Total: -0.97 kcal Atomic # 6 Polarization: 3.14 SS G_CDS: -2.05 Total: 1.10 kcal Atomic # 7 Polarization: -40.90 SS G_CDS: 0.41 Total: -40.49 kcal Atomic # 14 Polarization: 15.82 SS G_CDS: -5.03 Total: 10.79 kcal Atomic # 17 Polarization: -2.06 SS G_CDS: -2.97 Total: -5.02 kcal Total LS contribution 3.11 Total: 3.11 kcal Total: -25.13 -6.36 -31.48 kcal The number of atoms in the molecule is 18 The average number of expansion shells was 13.00 The maximum number of expansion shells was 13 The minimum number of expansion shells was 13 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044368426.mol2 18 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.185 kcal (2) G-P(sol) polarization free energy of solvation -25.126 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.358 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.484 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.701 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.09 seconds