Wall clock time and date at job start Mon Mar 30 2020 02:28:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30742 * 1 3 3 Si 1.86794 * 120.00414 * 2 1 4 4 H 1.48493 * 109.47273 * 269.99689 * 3 2 1 5 5 H 1.48501 * 109.47155 * 29.99826 * 3 2 1 6 6 H 1.48509 * 109.47138 * 149.99654 * 3 2 1 7 7 C 1.40054 * 119.99288 * 179.97438 * 2 1 3 8 8 H 1.08007 * 120.00055 * 192.93597 * 7 2 1 9 9 C 1.41433 * 120.00360 * 12.93884 * 7 2 1 10 10 C 1.41251 * 121.26595 * 24.50283 * 9 7 2 11 11 C 1.38216 * 117.68958 * 180.02562 * 10 9 7 12 12 Cl 1.73599 * 119.94415 * 179.97438 * 11 10 9 13 13 N 1.32208 * 120.10778 * 0.27930 * 11 10 9 14 14 N 1.28208 * 122.84550 * 359.41216 * 13 11 10 15 15 C 1.31788 * 122.44429 * 0.59977 * 14 13 11 16 16 Cl 1.73599 * 120.27858 * 179.68868 * 15 14 13 17 17 H 0.97001 * 119.99343 * 4.98621 * 1 2 3 18 18 H 1.07997 * 121.15594 * 359.97438 * 10 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3074 0.0000 0.0000 3 14 2.2415 1.6176 0.0000 4 1 2.4891 2.0463 -1.4000 5 1 1.4390 2.6526 0.7000 6 1 3.5391 1.4400 0.7002 7 6 2.0075 -1.2130 0.0005 8 1 3.0671 -1.2249 0.2099 9 6 1.3272 -2.4224 -0.2732 10 6 0.1324 -2.4371 -1.0263 11 6 -0.4713 -3.6603 -1.2492 12 17 -1.9424 -3.7463 -2.1669 13 7 0.0665 -4.7643 -0.7595 14 7 1.1532 -4.7659 -0.0791 15 6 1.8163 -3.6609 0.1966 16 17 3.2785 -3.7273 1.1300 17 1 -0.4849 0.8369 -0.0730 18 1 -0.2951 -1.5242 -1.4139 RHF calculation, no. of doubly occupied orbitals= 32 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000261147693.mol2 18 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:28:23 Heat of formation + Delta-G solvation = 1.864258 kcal Electronic energy + Delta-G solvation = -10321.310196 eV Core-core repulsion = 8017.563438 eV Total energy + Delta-G solvation = -2303.746759 eV No. of doubly occupied orbitals = 32 Molecular weight (most abundant/longest-lived isotopes) = 217.971 amu Computer time = 0.09 seconds Orbital eigenvalues (eV) -41.14093 -37.67528 -37.31029 -36.58057 -33.13134 -32.42260 -28.57800 -24.90078 -24.18681 -19.86603 -18.42132 -17.75030 -17.18559 -16.29985 -15.89046 -14.74594 -14.29009 -13.68946 -13.45783 -13.22830 -12.81067 -12.38369 -12.32748 -12.07486 -12.00160 -11.82797 -11.43195 -10.45732 -10.27378 -10.07949 -8.99117 -6.93701 0.22489 0.38106 0.77924 1.31988 1.40429 1.50022 1.57444 2.11628 2.40642 3.15873 3.94386 4.20374 4.47320 4.79081 4.88545 5.16484 5.53586 5.96663 6.20723 6.36179 7.92692 8.08547 Molecular weight = 217.97amu Principal moments of inertia in cm(-1) A = 0.024353 B = 0.014141 C = 0.009128 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1149.468140 B = 1979.522040 C = 3066.666599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.779 5.779 2 C 0.035 3.965 3 Si 0.998 3.002 4 H -0.254 1.254 5 H -0.263 1.263 6 H -0.249 1.249 7 C -0.404 4.404 8 H 0.112 0.888 9 C 0.069 3.931 10 C -0.199 4.199 11 C 0.120 3.880 12 Cl -0.033 7.033 13 N -0.367 5.367 14 N -0.232 5.232 15 C 0.014 3.986 16 Cl -0.028 7.028 17 H 0.308 0.692 18 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.953 4.831 -0.940 5.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C -0.188 4.188 3 Si 0.816 3.184 4 H -0.178 1.178 5 H -0.187 1.187 6 H -0.172 1.172 7 C -0.433 4.433 8 H 0.130 0.870 9 C 0.058 3.942 10 C -0.229 4.229 11 C -0.041 4.041 12 Cl -0.005 7.005 13 N -0.218 5.218 14 N -0.073 5.073 15 C -0.167 4.167 16 Cl 0.000 7.000 17 H 0.120 0.880 18 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.523 3.282 -0.759 3.697 hybrid contribution 0.076 1.827 -0.156 1.835 sum 1.599 5.109 -0.916 5.431 Atomic orbital electron populations 1.69701 1.09476 1.33250 1.27695 1.27136 0.95701 1.05379 0.90547 0.84914 0.79177 0.73987 0.80337 1.17819 1.18719 1.17229 1.20302 0.97992 0.89986 1.35030 0.87043 1.18511 0.92265 0.92865 0.90570 1.22072 0.99647 0.96720 1.04493 1.23173 0.91061 0.92985 0.96894 1.98293 1.32181 1.98723 1.71342 1.72491 1.07358 1.24910 1.17012 1.72056 1.01141 1.26023 1.08046 1.23716 0.95281 0.92809 1.04899 1.98253 1.32245 1.98572 1.70939 0.87956 0.83080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.78 -33.66 10.77 21.84 0.24 -33.43 13 2 C 0.03 1.43 5.28 85.30 0.45 1.88 13 3 Si 1.00 30.42 29.58 68.60 2.03 32.45 13 4 H -0.25 -7.49 7.11 99.48 0.71 -6.78 13 5 H -0.26 -7.67 7.11 99.48 0.71 -6.97 13 6 H -0.25 -7.41 7.11 99.48 0.71 -6.70 13 7 C -0.40 -18.21 8.63 23.50 0.20 -18.01 13 8 H 0.11 4.71 7.20 -2.91 -0.02 4.69 13 9 C 0.07 3.41 5.62 -21.02 -0.12 3.29 13 10 C -0.20 -9.75 8.65 23.01 0.20 -9.55 13 11 C 0.12 5.77 7.35 84.63 0.62 6.39 13 12 Cl -0.03 -1.32 29.13 -2.72 -0.08 -1.40 13 13 N -0.37 -18.91 11.46 -50.12 -0.57 -19.48 13 14 N -0.23 -11.94 11.46 -48.46 -0.56 -12.50 13 15 C 0.01 0.69 7.45 85.43 0.64 1.32 13 16 Cl -0.03 -1.13 27.91 -2.72 -0.08 -1.21 13 17 H 0.31 11.66 8.30 -92.71 -0.77 10.89 13 18 H 0.15 7.28 6.17 -2.91 -0.02 7.26 13 Total: -1.00 -52.14 206.29 4.29 -47.85 By element: Atomic # 1 Polarization: 1.07 SS G_CDS: 1.31 Total: 2.38 kcal Atomic # 6 Polarization: -16.67 SS G_CDS: 1.99 Total: -14.67 kcal Atomic # 7 Polarization: -64.52 SS G_CDS: -0.89 Total: -65.41 kcal Atomic # 14 Polarization: 30.42 SS G_CDS: 2.03 Total: 32.45 kcal Atomic # 17 Polarization: -2.45 SS G_CDS: -0.16 Total: -2.61 kcal Total: -52.14 4.29 -47.85 kcal The number of atoms in the molecule is 18 The average number of expansion shells was 13.00 The maximum number of expansion shells was 13 The minimum number of expansion shells was 13 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261147693.mol2 18 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.715 kcal (2) G-P(sol) polarization free energy of solvation -52.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.421 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.285 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.851 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.864 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.09 seconds