Wall clock time and date at job start Mon Mar 30 2020 02:30:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.40040 * 110.99922 * 2 1 4 4 C 1.39403 * 129.95667 * 283.50754 * 3 2 1 5 5 C 1.37902 * 120.19854 * 179.51689 * 4 3 2 6 6 C 1.38307 * 120.26411 * 359.96795 * 5 4 3 7 7 C 1.38303 * 119.88286 * 0.16698 * 6 5 4 8 8 C 1.37920 * 120.07823 * 0.27516 * 7 6 5 9 9 C 1.51571 * 131.55878 * 179.69420 * 8 7 6 10 10 H 1.09007 * 110.73937 * 314.03561 * 9 8 7 11 11 O 1.42899 * 110.95174 * 77.32618 * 9 8 7 12 12 C 1.47910 * 111.00008 * 119.96126 * 2 1 3 13 13 H 1.09006 * 110.77885 * 147.04558 * 12 2 1 14 14 C 1.50696 * 110.78000 * 23.80318 * 12 2 1 15 15 H 1.08000 * 120.00179 * 241.45201 * 14 12 2 16 16 C 1.37878 * 120.00221 * 61.45766 * 14 12 2 17 17 N 1.31516 * 119.99944 * 359.97438 * 16 14 12 18 18 Si 1.86800 * 120.00170 * 180.02562 * 16 14 12 19 19 H 1.48505 * 109.47192 * 359.97438 * 18 16 14 20 20 H 1.48494 * 109.47327 * 119.99608 * 18 16 14 21 21 H 1.48494 * 109.46984 * 239.99664 * 18 16 14 22 22 H 1.08996 * 109.47203 * 59.87589 * 1 2 3 23 23 H 1.09000 * 109.46951 * 179.87750 * 1 2 3 24 24 H 1.09003 * 109.47302 * 299.87163 * 1 2 3 25 25 H 1.08006 * 119.89676 * 359.54770 * 4 3 2 26 26 H 1.08004 * 119.86819 * 179.97438 * 5 4 3 27 27 H 1.08003 * 120.05686 * 180.14680 * 6 5 4 28 28 H 1.08002 * 119.95633 * 179.97438 * 7 6 5 29 29 H 0.96696 * 114.00634 * 293.47043 * 11 9 8 30 30 H 0.97000 * 120.00046 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9708 1.3074 0.0000 4 6 2.0586 2.2326 -1.0390 5 6 2.5875 3.4854 -0.8094 6 6 3.0338 3.8330 0.4527 7 6 2.9526 2.9196 1.4880 8 6 2.4329 1.6623 1.2615 9 6 2.2302 0.4769 2.1841 10 1 3.1206 0.3009 2.7877 11 8 1.0856 0.6683 3.0180 12 6 1.9991 -0.6896 1.1963 13 1 2.9360 -1.1972 0.9667 14 6 0.9872 -1.6623 1.7450 15 1 0.6002 -1.5323 2.7449 16 6 0.5554 -2.7181 0.9706 17 7 1.0263 -2.8762 -0.2472 18 14 -0.6994 -3.9234 1.6504 19 1 -1.0682 -3.5266 3.0332 20 1 -1.9112 -3.9131 0.7922 21 1 -0.1159 -5.2888 1.6667 22 1 -0.3633 0.5157 -0.8888 23 1 -0.3633 -1.0277 -0.0022 24 1 -0.3634 0.5118 0.8911 25 1 1.7109 1.9677 -2.0266 26 1 2.6534 4.1979 -1.6184 27 1 3.4452 4.8158 0.6293 28 1 3.3011 3.1897 2.4740 29 1 1.1797 1.3889 3.6559 30 1 0.7223 -3.6188 -0.7922 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259751415.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:30:54 Heat of formation + Delta-G solvation = 6.191324 kcal Electronic energy + Delta-G solvation = -15081.589776 eV Core-core repulsion = 12649.534959 eV Total energy + Delta-G solvation = -2432.054817 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 219.100 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -40.01232 -36.50886 -34.95330 -32.49909 -30.76376 -28.91894 -28.15563 -25.00030 -24.22347 -21.52536 -20.53347 -19.70802 -17.12903 -16.10118 -15.82223 -15.19645 -14.74299 -14.22229 -13.44666 -13.28947 -13.09653 -12.77324 -12.37531 -12.08313 -11.68506 -11.46950 -11.11683 -10.86211 -10.63688 -10.51950 -10.15085 -9.79377 -9.26245 -9.12810 -8.54681 -8.35431 -8.20668 -6.80484 -6.04513 -4.12991 1.86135 1.96996 3.27319 3.36528 3.42275 4.25879 4.38913 4.80758 5.20454 5.25583 5.37285 5.43965 5.50479 5.82675 5.94380 6.03436 6.32559 6.37831 6.51905 6.68426 6.87056 6.94261 6.96575 7.17229 7.29045 7.47589 7.53265 7.85599 7.95898 8.28484 8.43171 8.68326 9.01479 9.52249 11.00439 Molecular weight = 219.10amu Principal moments of inertia in cm(-1) A = 0.048489 B = 0.009936 C = 0.008892 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 577.308818 B = 2817.265355 C = 3147.995743 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.473 5.473 3 C 0.131 3.869 4 C -0.138 4.138 5 C -0.100 4.100 6 C -0.165 4.165 7 C -0.082 4.082 8 C -0.195 4.195 9 C 0.120 3.880 10 H 0.053 0.947 11 O -0.530 6.530 12 C 0.219 3.781 13 H 0.066 0.934 14 C -0.516 4.516 15 H 0.076 0.924 16 C 0.068 3.932 17 N -0.861 5.861 18 Si 0.889 3.111 19 H -0.271 1.271 20 H -0.283 1.283 21 H -0.284 1.284 22 H 0.025 0.975 23 H 0.098 0.902 24 H 0.023 0.977 25 H 0.117 0.883 26 H 0.116 0.884 27 H 0.114 0.886 28 H 0.109 0.891 29 H 0.350 0.650 30 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.877 9.305 1.600 9.627 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.188 5.188 3 C 0.032 3.968 4 C -0.158 4.158 5 C -0.119 4.119 6 C -0.184 4.184 7 C -0.101 4.101 8 C -0.198 4.198 9 C 0.060 3.940 10 H 0.071 0.929 11 O -0.332 6.332 12 C 0.114 3.886 13 H 0.083 0.917 14 C -0.555 4.555 15 H 0.094 0.906 16 C -0.137 4.137 17 N -0.497 5.497 18 Si 0.716 3.284 19 H -0.195 1.195 20 H -0.209 1.209 21 H -0.210 1.210 22 H 0.044 0.956 23 H 0.116 0.884 24 H 0.042 0.958 25 H 0.135 0.865 26 H 0.134 0.866 27 H 0.132 0.868 28 H 0.127 0.873 29 H 0.194 0.806 30 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 1.739 8.298 0.604 8.500 hybrid contribution -0.481 0.291 1.111 1.245 sum 1.259 8.589 1.715 8.848 Atomic orbital electron populations 1.22115 0.85265 1.03988 0.96797 1.60354 1.08892 1.06861 1.42696 1.20235 0.94023 0.90400 0.92173 1.20516 1.03823 0.93340 0.98150 1.20794 0.98589 0.95789 0.96748 1.20795 1.04907 0.99193 0.93522 1.20332 0.98816 0.92472 0.98456 1.21980 1.04417 0.96214 0.97188 1.22160 0.87733 0.93033 0.91082 0.92888 1.86864 1.39869 1.55448 1.51029 1.20425 0.97765 0.89013 0.81355 0.91673 1.20955 1.24706 1.08270 1.01556 0.90602 1.25057 0.96647 0.97208 0.94799 1.70137 1.41834 1.29675 1.08021 0.86578 0.81327 0.80988 0.79464 1.19537 1.20918 1.20956 0.95590 0.88384 0.95792 0.86535 0.86613 0.86821 0.87306 0.80569 0.92974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 1.55 8.30 60.06 0.50 2.04 16 2 N -0.47 -11.75 4.91 -170.65 -0.84 -12.59 16 3 C 0.13 2.88 5.59 -83.41 -0.47 2.41 16 4 C -0.14 -2.61 10.07 -39.27 -0.40 -3.01 16 5 C -0.10 -1.60 10.02 -39.68 -0.40 -1.99 16 6 C -0.17 -2.54 10.06 -39.53 -0.40 -2.93 16 7 C -0.08 -1.38 10.03 -39.67 -0.40 -1.78 16 8 C -0.19 -3.95 5.93 -104.04 -0.62 -4.57 16 9 C 0.12 2.59 4.20 -26.62 -0.11 2.48 16 10 H 0.05 1.06 8.14 -51.93 -0.42 0.64 16 11 O -0.53 -11.10 11.13 -35.23 -0.39 -11.49 16 12 C 0.22 5.57 3.17 -67.47 -0.21 5.36 16 13 H 0.07 1.79 8.14 -51.93 -0.42 1.36 16 14 C -0.52 -13.91 6.80 -34.44 -0.23 -14.14 16 15 H 0.08 2.10 6.79 -52.49 -0.36 1.74 16 16 C 0.07 1.82 3.63 -17.82 -0.06 1.76 16 17 N -0.86 -24.13 12.18 55.43 0.68 -23.45 16 18 Si 0.89 20.87 29.54 -169.99 -5.02 15.85 16 19 H -0.27 -6.36 7.11 56.52 0.40 -5.96 16 20 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 21 H -0.28 -6.63 7.11 56.52 0.40 -6.22 16 22 H 0.03 0.57 8.14 -51.93 -0.42 0.15 16 23 H 0.10 2.60 4.80 -51.93 -0.25 2.35 16 24 H 0.02 0.58 7.52 -51.93 -0.39 0.19 16 25 H 0.12 2.09 8.06 -52.48 -0.42 1.67 16 26 H 0.12 1.47 8.06 -52.48 -0.42 1.04 16 27 H 0.11 1.39 8.06 -52.48 -0.42 0.97 16 28 H 0.11 1.53 8.06 -52.49 -0.42 1.11 16 29 H 0.35 5.50 9.12 45.56 0.42 5.91 16 30 H 0.26 6.97 8.31 -40.82 -0.34 6.63 16 LS Contribution 250.07 15.07 3.77 3.77 Total: -1.00 -29.63 250.07 -7.28 -36.91 By element: Atomic # 1 Polarization: 8.06 SS G_CDS: -2.67 Total: 5.38 kcal Atomic # 6 Polarization: -11.57 SS G_CDS: -2.80 Total: -14.37 kcal Atomic # 7 Polarization: -35.88 SS G_CDS: -0.16 Total: -36.04 kcal Atomic # 8 Polarization: -11.10 SS G_CDS: -0.39 Total: -11.49 kcal Atomic # 14 Polarization: 20.87 SS G_CDS: -5.02 Total: 15.85 kcal Total LS contribution 3.77 Total: 3.77 kcal Total: -29.63 -7.28 -36.91 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259751415.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.098 kcal (2) G-P(sol) polarization free energy of solvation -29.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.280 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.907 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.191 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds