Wall clock time and date at job start Mon Mar 30 2020 02:31:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.40331 * 110.99602 * 2 1 4 4 C 1.38799 * 110.96427 * 103.69082 * 3 2 1 5 5 C 1.38027 * 120.51118 * 180.33619 * 4 3 2 6 6 C 1.38286 * 120.18069 * 359.79673 * 5 4 3 7 7 C 1.38282 * 119.91819 * 359.97438 * 6 5 4 8 8 C 1.38329 * 120.19761 * 0.10303 * 7 6 5 9 9 O 1.36018 * 119.94432 * 180.02562 * 8 7 6 10 10 C 1.51580 * 107.97572 * 0.44215 * 4 3 2 11 11 C 1.47910 * 111.00457 * 119.93577 * 2 1 3 12 12 H 1.08994 * 110.77782 * 147.06972 * 11 2 1 13 13 C 1.50701 * 110.77695 * 23.63207 * 11 2 1 14 14 H 1.07991 * 120.00496 * 241.45359 * 13 11 2 15 15 C 1.37886 * 120.00003 * 61.45573 * 13 11 2 16 16 N 1.31522 * 119.99526 * 359.97438 * 15 13 11 17 17 Si 1.86797 * 120.00297 * 180.02562 * 15 13 11 18 18 H 1.48492 * 109.47185 * 89.99580 * 17 15 13 19 19 H 1.48502 * 109.47204 * 210.00143 * 17 15 13 20 20 H 1.48503 * 109.46961 * 329.99676 * 17 15 13 21 21 H 1.09002 * 109.47401 * 59.87353 * 1 2 3 22 22 H 1.09001 * 109.46874 * 299.87366 * 1 2 3 23 23 H 1.09004 * 109.46970 * 179.87499 * 1 2 3 24 24 H 1.08006 * 119.91075 * 179.81164 * 5 4 3 25 25 H 1.07999 * 120.04455 * 180.02562 * 6 5 4 26 26 H 1.08000 * 119.89944 * 180.12418 * 7 6 5 27 27 H 0.96690 * 113.99900 * 270.01407 * 9 8 7 28 28 H 1.08998 * 110.73760 * 134.53813 * 10 4 3 29 29 H 1.09003 * 110.73456 * 257.67955 * 10 4 3 30 30 H 0.97000 * 119.99682 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9718 1.3101 0.0000 4 6 2.4362 1.6639 1.2593 5 6 2.9681 2.9176 1.4834 6 6 3.0472 3.8340 0.4507 7 6 2.5927 3.4933 -0.8100 8 6 2.0570 2.2390 -1.0411 9 8 1.6119 1.9092 -2.2833 10 6 2.2343 0.4785 2.1823 11 6 1.9992 -0.6891 1.1966 12 1 2.9363 -1.1963 0.9673 13 6 0.9857 -1.6585 1.7482 14 1 0.6005 -1.5262 2.7483 15 6 0.5503 -2.7145 0.9758 16 7 1.0191 -2.8753 -0.2424 17 14 -0.7064 -3.9157 1.6592 18 1 -2.0747 -3.4380 1.3357 19 1 -0.4929 -5.2542 1.0523 20 1 -0.5506 -4.0100 3.1330 21 1 -0.3634 0.5158 -0.8888 22 1 -0.3633 0.5119 0.8911 23 1 -0.3633 -1.0277 -0.0022 24 1 3.3238 3.1837 2.4679 25 1 3.4642 4.8142 0.6284 26 1 2.6564 4.2084 -1.6168 27 1 0.6804 2.1188 -2.4359 28 1 3.1258 0.3018 2.7841 29 1 1.3635 0.6300 2.8201 30 1 0.7131 -3.6184 -0.7856 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260418183.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:31:24 Heat of formation + Delta-G solvation = 4.425787 kcal Electronic energy + Delta-G solvation = -14939.170194 eV Core-core repulsion = 12507.038818 eV Total energy + Delta-G solvation = -2432.131376 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 219.100 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -40.03850 -37.12492 -35.60410 -32.59892 -30.78805 -28.71241 -28.26159 -25.02483 -24.61006 -21.50632 -20.70728 -19.82513 -17.35968 -16.47268 -15.61950 -15.46348 -14.84299 -14.41490 -13.84013 -13.66979 -13.04174 -12.42491 -12.19440 -11.87469 -11.76565 -11.59645 -11.34467 -10.89815 -10.66847 -10.62008 -10.27101 -9.94785 -9.80598 -9.27388 -8.57419 -8.27833 -8.07110 -6.68922 -6.11560 -4.25857 1.79538 1.91057 3.21386 3.30238 3.32502 4.14304 4.29862 4.74624 4.81590 5.25089 5.36519 5.48263 5.73736 5.94115 6.04493 6.19738 6.32818 6.41929 6.58760 6.65897 6.75929 6.84072 6.89228 7.11624 7.27799 7.36182 7.58725 7.72100 7.92253 8.13740 8.35391 8.61939 8.88720 9.41013 10.91941 Molecular weight = 219.10amu Principal moments of inertia in cm(-1) A = 0.046290 B = 0.009508 C = 0.008367 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 604.733561 B = 2944.065038 C = 3345.585850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.464 5.464 3 C 0.091 3.909 4 C -0.134 4.134 5 C -0.103 4.103 6 C -0.143 4.143 7 C -0.136 4.136 8 C 0.086 3.914 9 O -0.489 6.489 10 C -0.105 4.105 11 C 0.213 3.787 12 H 0.055 0.945 13 C -0.540 4.540 14 H 0.063 0.937 15 C 0.074 3.926 16 N -0.849 5.849 17 Si 0.887 3.113 18 H -0.278 1.278 19 H -0.284 1.284 20 H -0.272 1.272 21 H 0.025 0.975 22 H 0.010 0.990 23 H 0.100 0.900 24 H 0.113 0.887 25 H 0.118 0.882 26 H 0.121 0.879 27 H 0.375 0.625 28 H 0.066 0.934 29 H 0.072 0.928 30 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.278 9.458 0.959 9.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.179 5.179 3 C -0.008 4.008 4 C -0.137 4.137 5 C -0.122 4.122 6 C -0.162 4.162 7 C -0.155 4.155 8 C 0.039 3.961 9 O -0.297 6.297 10 C -0.143 4.143 11 C 0.109 3.891 12 H 0.073 0.927 13 C -0.579 4.579 14 H 0.081 0.919 15 C -0.133 4.133 16 N -0.484 5.484 17 Si 0.714 3.286 18 H -0.204 1.204 19 H -0.210 1.210 20 H -0.197 1.197 21 H 0.044 0.956 22 H 0.029 0.971 23 H 0.118 0.882 24 H 0.131 0.869 25 H 0.136 0.864 26 H 0.139 0.861 27 H 0.229 0.771 28 H 0.085 0.915 29 H 0.091 0.909 30 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 0.408 8.763 0.227 8.776 hybrid contribution -1.280 -0.092 0.927 1.583 sum -0.872 8.672 1.154 8.791 Atomic orbital electron populations 1.22044 0.86092 1.03934 0.96048 1.60392 1.08114 1.06258 1.43179 1.20633 0.97037 0.91361 0.91805 1.21344 1.01477 0.95343 0.95583 1.20376 1.00300 0.92707 0.98820 1.20684 1.03648 0.99242 0.92666 1.21010 1.02041 0.95138 0.97333 1.18041 1.02531 0.92088 0.83423 1.84914 1.30254 1.85734 1.28809 1.21929 1.00915 0.93111 0.98341 1.20289 0.96930 0.89609 0.82293 0.92690 1.21011 1.25771 1.10197 1.00895 0.91854 1.25050 0.96447 0.97009 0.94745 1.70140 1.40989 1.29367 1.07889 0.86673 0.81705 0.80709 0.79498 1.20419 1.20964 1.19686 0.95584 0.97110 0.88211 0.86867 0.86367 0.86087 0.77145 0.91495 0.90921 0.92683 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 1.50 8.30 60.07 0.50 2.00 16 2 N -0.46 -11.50 4.92 -170.48 -0.84 -12.34 16 3 C 0.09 2.02 5.54 -83.18 -0.46 1.56 16 4 C -0.13 -2.75 6.23 -104.06 -0.65 -3.40 16 5 C -0.10 -1.76 10.03 -39.64 -0.40 -2.16 16 6 C -0.14 -2.22 10.06 -39.55 -0.40 -2.62 16 7 C -0.14 -2.25 9.96 -39.53 -0.39 -2.65 16 8 C 0.09 1.70 6.73 -38.97 -0.26 1.43 16 9 O -0.49 -9.23 13.51 -19.80 -0.27 -9.50 16 10 C -0.10 -2.23 6.48 -26.61 -0.17 -2.40 16 11 C 0.21 5.38 3.20 -67.47 -0.22 5.16 16 12 H 0.06 1.53 8.14 -51.93 -0.42 1.11 16 13 C -0.54 -14.12 7.16 -34.44 -0.25 -14.36 16 14 H 0.06 1.62 7.66 -52.49 -0.40 1.22 16 15 C 0.07 1.95 3.63 -17.81 -0.06 1.89 16 16 N -0.85 -23.66 12.17 55.43 0.67 -22.98 16 17 Si 0.89 20.13 29.54 -169.99 -5.02 15.11 16 18 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 19 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 20 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 21 H 0.03 0.54 8.14 -51.93 -0.42 0.12 16 22 H 0.01 0.24 8.11 -51.93 -0.42 -0.19 16 23 H 0.10 2.54 4.79 -51.93 -0.25 2.29 16 24 H 0.11 1.64 8.06 -52.48 -0.42 1.21 16 25 H 0.12 1.44 8.06 -52.49 -0.42 1.01 16 26 H 0.12 1.68 8.06 -52.49 -0.42 1.25 16 27 H 0.37 5.32 9.06 45.56 0.41 5.73 16 28 H 0.07 1.31 8.14 -51.93 -0.42 0.89 16 29 H 0.07 1.53 7.82 -51.93 -0.41 1.12 16 30 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 LS Contribution 253.12 15.07 3.81 3.81 Total: -1.00 -29.49 253.12 -7.14 -36.63 By element: Atomic # 1 Polarization: 7.55 SS G_CDS: -2.74 Total: 4.81 kcal Atomic # 6 Polarization: -12.79 SS G_CDS: -2.76 Total: -15.55 kcal Atomic # 7 Polarization: -35.16 SS G_CDS: -0.16 Total: -35.32 kcal Atomic # 8 Polarization: -9.23 SS G_CDS: -0.27 Total: -9.50 kcal Atomic # 14 Polarization: 20.13 SS G_CDS: -5.02 Total: 15.11 kcal Total LS contribution 3.81 Total: 3.81 kcal Total: -29.49 -7.14 -36.63 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260418183.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.054 kcal (2) G-P(sol) polarization free energy of solvation -29.492 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.628 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds