Wall clock time and date at job start Mon Mar 30 2020 03:05:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 N 1.31391 * 125.21521 * 2 1 4 4 C 1.32017 * 109.64596 * 180.30834 * 3 2 1 5 5 C 1.38984 * 107.52718 * 359.89176 * 4 3 2 6 6 N 1.34866 * 125.20894 * 179.81225 * 2 1 3 7 7 H 0.97001 * 126.59697 * 359.79686 * 6 2 1 8 8 C 1.41333 * 122.36176 * 179.75628 * 5 4 3 9 9 O 1.21421 * 121.19229 * 177.40224 * 8 5 4 10 10 C 1.51343 * 117.61572 * 357.41715 * 8 5 4 11 11 C 1.52852 * 110.15753 * 32.30425 * 10 8 5 12 12 H 1.08993 * 109.26213 * 60.57533 * 11 10 8 13 13 C 1.50700 * 109.26511 * 180.02562 * 11 10 8 14 14 H 1.08000 * 120.00262 * 119.99849 * 13 11 10 15 15 C 1.37879 * 120.00056 * 299.99919 * 13 11 10 16 16 N 1.31515 * 119.99655 * 359.97438 * 15 13 11 17 17 Si 1.86794 * 120.00068 * 180.02562 * 15 13 11 18 18 H 1.48499 * 109.47523 * 89.99605 * 17 15 13 19 19 H 1.48501 * 109.46947 * 209.99571 * 17 15 13 20 20 H 1.48500 * 109.46992 * 329.99410 * 17 15 13 21 21 C 1.50771 * 130.18769 * 180.02562 * 4 3 2 22 22 H 1.09001 * 109.46995 * 270.18449 * 1 2 3 23 23 H 1.08994 * 109.47046 * 30.18053 * 1 2 3 24 24 H 1.09000 * 109.47017 * 150.18550 * 1 2 3 25 25 H 1.09007 * 109.35730 * 152.51116 * 10 8 5 26 26 H 1.09000 * 109.36197 * 272.09428 * 10 8 5 27 27 H 0.96998 * 119.99691 * 180.02562 * 16 15 13 28 28 H 1.08998 * 109.76044 * 34.02909 * 21 4 3 29 29 H 1.08999 * 109.80041 * 273.30414 * 21 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2647 1.0735 0.0000 4 6 3.5365 0.7191 -0.0067 5 6 3.5840 -0.6699 -0.0087 6 7 2.2847 -1.1019 0.0036 7 1 1.9818 -2.0234 0.0094 8 6 4.8029 -1.3852 -0.0207 9 8 4.8206 -2.5984 0.0249 10 6 6.0853 -0.5847 -0.0919 11 6 5.9133 0.7511 0.6309 12 1 5.6737 0.5652 1.6778 13 6 7.2001 1.5310 0.5471 14 1 7.2142 2.4999 0.0702 15 6 8.3593 1.0077 1.0794 16 7 8.3420 -0.1719 1.6606 17 14 9.9541 1.9748 0.9762 18 1 10.0876 2.8390 2.1764 19 1 11.1008 1.0332 0.9143 20 1 9.9419 2.8208 -0.2441 21 6 4.7828 1.5675 -0.0090 22 1 -0.3633 0.0033 1.0277 23 1 -0.3633 0.8883 -0.5166 24 1 -0.3633 -0.8917 -0.5110 25 1 6.8902 -1.1492 0.3789 26 1 6.3388 -0.4005 -1.1359 27 1 9.1574 -0.5400 2.0353 28 1 4.6115 2.4756 0.5690 29 1 5.0504 1.8278 -1.0331 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259802979.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:05:16 Heat of formation + Delta-G solvation = 1.447876 kcal Electronic energy + Delta-G solvation = -14649.928608 eV Core-core repulsion = 12152.242189 eV Total energy + Delta-G solvation = -2497.686419 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 220.095 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -42.02451 -38.26654 -35.53067 -32.75058 -32.08941 -30.76564 -27.81836 -27.09803 -24.76857 -21.48637 -20.90313 -20.55545 -18.17431 -17.09234 -16.26285 -15.35281 -14.88642 -14.69808 -13.97526 -13.79477 -13.42162 -12.91639 -12.77558 -12.64871 -12.48172 -11.99150 -11.40531 -11.00065 -10.69772 -10.35927 -10.13458 -10.01448 -9.67748 -9.51775 -9.28632 -8.72960 -8.41365 -7.84651 -6.07908 -4.16005 1.41487 3.06532 3.16661 3.29331 3.36596 3.39061 3.69472 4.34523 4.47118 4.96459 5.14838 5.26028 5.38725 5.44705 5.61703 5.81693 5.96665 6.32437 6.33369 6.51551 6.60657 6.77710 7.02139 7.07345 7.51539 7.58129 7.77033 7.94875 8.15613 8.27339 8.39793 8.88260 9.50464 10.98483 Molecular weight = 220.10amu Principal moments of inertia in cm(-1) A = 0.049593 B = 0.007943 C = 0.007041 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 564.460691 B = 3524.444322 C = 3975.811729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 C 0.214 3.786 3 N -0.493 5.493 4 C 0.107 3.893 5 C -0.137 4.137 6 N -0.528 5.528 7 H 0.422 0.578 8 C 0.427 3.573 9 O -0.502 6.502 10 C -0.144 4.144 11 C 0.056 3.944 12 H 0.034 0.966 13 C -0.516 4.516 14 H 0.064 0.936 15 C 0.062 3.938 16 N -0.889 5.889 17 Si 0.896 3.104 18 H -0.280 1.280 19 H -0.287 1.287 20 H -0.273 1.273 21 C -0.039 4.039 22 H 0.082 0.918 23 H 0.092 0.908 24 H 0.073 0.927 25 H 0.127 0.873 26 H 0.080 0.920 27 H 0.264 0.736 28 H 0.077 0.923 29 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.474 -0.263 -3.373 11.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 C -0.048 4.048 3 N -0.213 5.213 4 C -0.031 4.031 5 C -0.251 4.251 6 N -0.129 5.129 7 H 0.260 0.740 8 C 0.310 3.690 9 O -0.382 6.382 10 C -0.183 4.183 11 C 0.037 3.963 12 H 0.052 0.948 13 C -0.554 4.554 14 H 0.082 0.918 15 C -0.140 4.140 16 N -0.527 5.527 17 Si 0.724 3.276 18 H -0.206 1.206 19 H -0.212 1.212 20 H -0.197 1.197 21 C -0.077 4.077 22 H 0.100 0.900 23 H 0.111 0.889 24 H 0.092 0.908 25 H 0.145 0.855 26 H 0.098 0.902 27 H 0.074 0.926 28 H 0.095 0.905 29 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -11.631 -0.227 -3.248 12.078 hybrid contribution 0.894 -0.870 0.045 1.248 sum -10.737 -1.096 -3.203 11.258 Atomic orbital electron populations 1.20220 0.84708 1.04048 1.03654 1.23639 0.95626 0.81616 1.03893 1.69615 1.02567 1.28023 1.21120 1.22296 0.93124 0.91104 0.96540 1.21084 0.86190 0.97137 1.20726 1.42670 1.06299 1.09895 1.54026 0.73968 1.21354 0.89631 0.88377 0.69669 1.90469 1.90536 1.16642 1.40526 1.22268 0.93905 0.99688 1.02406 1.18706 0.92368 0.90014 0.95257 0.94778 1.21095 0.92529 1.03861 1.37932 0.91818 1.25010 0.99241 0.94995 0.94754 1.69831 1.28398 1.16706 1.37772 0.86517 0.82781 0.79729 0.78550 1.20624 1.21237 1.19747 1.20486 0.87884 0.97276 1.02025 0.89980 0.88908 0.90835 0.85534 0.90172 0.92615 0.90463 0.90315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.63 10.51 36.01 0.38 -0.25 15 2 C 0.21 3.23 8.10 -154.83 -1.25 1.98 15 3 N -0.49 -9.16 11.17 -6.35 -0.07 -9.23 15 4 C 0.11 2.17 7.14 -82.20 -0.59 1.58 15 5 C -0.14 -2.75 7.00 -84.14 -0.59 -3.34 15 6 N -0.53 -8.44 6.17 -8.01 -0.05 -8.48 15 7 H 0.42 5.44 8.96 -40.82 -0.37 5.08 15 8 C 0.43 9.51 6.92 -32.82 -0.23 9.28 15 9 O -0.50 -11.94 17.91 5.43 0.10 -11.84 15 10 C -0.14 -3.39 5.11 -27.64 -0.14 -3.53 15 11 C 0.06 1.33 2.05 -91.63 -0.19 1.14 15 12 H 0.03 0.90 8.14 -51.93 -0.42 0.48 15 13 C -0.52 -13.31 8.55 -34.44 -0.29 -13.60 15 14 H 0.06 1.59 7.74 -52.49 -0.41 1.18 15 15 C 0.06 1.64 5.30 -17.82 -0.09 1.54 15 16 N -0.89 -24.64 11.30 55.43 0.63 -24.02 15 17 Si 0.90 20.46 29.54 -169.99 -5.02 15.44 15 18 H -0.28 -6.39 7.11 56.52 0.40 -5.99 15 19 H -0.29 -6.56 7.11 56.52 0.40 -6.16 15 20 H -0.27 -6.10 7.11 56.52 0.40 -5.70 15 21 C -0.04 -0.80 5.52 -27.63 -0.15 -0.95 15 22 H 0.08 0.66 8.14 -51.93 -0.42 0.24 15 23 H 0.09 0.80 8.14 -51.93 -0.42 0.38 15 24 H 0.07 0.50 8.14 -51.93 -0.42 0.08 15 25 H 0.13 3.35 6.03 -51.93 -0.31 3.04 15 26 H 0.08 1.78 8.14 -51.93 -0.42 1.36 15 27 H 0.26 7.01 8.31 -40.82 -0.34 6.67 15 28 H 0.08 1.55 8.14 -51.93 -0.42 1.13 15 29 H 0.08 1.54 8.14 -51.93 -0.42 1.11 15 LS Contribution 251.67 15.07 3.79 3.79 Total: -1.00 -30.63 251.67 -6.95 -37.59 By element: Atomic # 1 Polarization: 6.07 SS G_CDS: -3.18 Total: 2.89 kcal Atomic # 6 Polarization: -2.99 SS G_CDS: -3.15 Total: -6.14 kcal Atomic # 7 Polarization: -42.24 SS G_CDS: 0.51 Total: -41.73 kcal Atomic # 8 Polarization: -11.94 SS G_CDS: 0.10 Total: -11.84 kcal Atomic # 14 Polarization: 20.46 SS G_CDS: -5.02 Total: 15.44 kcal Total LS contribution 3.79 Total: 3.79 kcal Total: -30.63 -6.95 -37.59 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259802979.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.036 kcal (2) G-P(sol) polarization free energy of solvation -30.634 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.954 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.588 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds