Wall clock time and date at job start Mon Mar 30 2020 02:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35961 * 116.99390 * 2 1 4 4 C 1.39419 * 120.00847 * 179.97438 * 3 2 1 5 5 C 1.37867 * 120.48971 * 180.02562 * 4 3 2 6 6 C 1.38592 * 120.97683 * 0.30120 * 5 4 3 7 7 C 1.41816 * 118.76138 * 359.39443 * 6 5 4 8 8 C 1.41139 * 120.11346 * 180.53729 * 7 6 5 9 9 H 1.07998 * 120.00582 * 24.86864 * 8 7 6 10 10 C 1.39925 * 119.99757 * 204.86574 * 8 7 6 11 11 N 1.30874 * 119.99872 * 17.97334 * 10 8 7 12 12 Si 1.86798 * 119.99949 * 197.97570 * 10 8 7 13 13 H 1.48500 * 109.47424 * 59.99865 * 12 10 8 14 14 H 1.48502 * 109.47080 * 179.97438 * 12 10 8 15 15 H 1.48506 * 109.47034 * 299.99699 * 12 10 8 16 16 C 1.37891 * 120.01386 * 359.97186 * 3 2 1 17 17 O 1.36160 * 111.45370 * 179.03591 * 6 5 4 18 18 C 1.43784 * 109.10554 * 18.76930 * 17 6 5 19 19 C 1.51705 * 132.00810 * 180.30758 * 5 4 3 20 20 H 1.08996 * 109.47065 * 299.99983 * 1 2 3 21 21 H 1.09001 * 109.46891 * 60.00361 * 1 2 3 22 22 H 1.09004 * 109.46511 * 180.02562 * 1 2 3 23 23 H 1.08002 * 119.75441 * 0.05911 * 4 3 2 24 24 H 0.97003 * 119.99475 * 180.02562 * 11 10 8 25 25 H 1.07998 * 119.98761 * 359.90686 * 16 3 2 26 26 H 1.08994 * 110.75874 * 214.13785 * 18 17 6 27 27 H 1.08996 * 110.75843 * 90.93843 * 18 17 6 28 28 H 1.08993 * 110.94734 * 46.50861 * 19 5 4 29 29 H 1.09005 * 110.97475 * 282.82279 * 19 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4384 1.2848 0.0005 5 6 4.0745 2.5080 0.0011 6 6 3.3494 3.6890 0.0073 7 6 1.9329 3.6202 0.0001 8 6 1.1663 4.8052 -0.0053 9 1 1.5875 5.7191 -0.3975 10 6 -0.1394 4.7960 0.4976 11 7 -0.5329 3.8227 1.2789 12 14 -1.3210 6.1730 0.0535 13 1 -1.5041 6.2124 -1.4196 14 1 -2.6316 5.9311 0.7084 15 1 -0.7667 7.4700 0.5183 16 6 1.2953 2.3680 -0.0006 17 8 4.1687 4.7763 0.0280 18 6 5.4836 4.3830 -0.4005 19 6 5.5430 2.8887 -0.0043 20 1 -0.3633 0.5138 0.8900 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3632 -1.0277 0.0005 23 1 4.0230 0.3767 0.0000 24 1 -1.4382 3.8162 1.6272 25 1 0.2168 2.3114 -0.0026 26 1 6.2484 4.9532 0.1268 27 1 5.5901 4.5014 -1.4787 28 1 6.0927 2.3103 -0.7468 29 1 5.9817 2.7652 0.9859 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261243140.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:39:14 Heat of formation + Delta-G solvation = -52.809487 kcal Electronic energy + Delta-G solvation = -14795.920283 eV Core-core repulsion = 12263.588337 eV Total energy + Delta-G solvation = -2532.331946 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 220.089 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.68464 -38.13766 -35.25825 -33.53610 -31.22897 -29.00919 -27.62641 -26.62486 -24.92785 -22.35968 -20.55862 -20.23262 -17.37980 -16.25463 -16.08951 -15.56148 -15.11325 -14.74110 -14.65418 -13.89515 -12.98977 -12.45943 -12.34661 -11.98957 -11.78663 -11.48256 -11.28078 -11.23549 -11.00533 -10.69327 -10.56718 -10.44263 -10.27349 -9.39336 -9.27643 -8.91002 -7.49757 -6.87788 -6.44559 -4.34733 2.70257 2.86465 3.05228 3.09021 3.19486 3.91892 4.25766 4.52502 4.61865 5.36586 5.40240 5.59950 5.74665 5.86494 5.95589 6.01697 6.17129 6.24580 6.38593 6.42558 6.78666 6.91265 7.04167 7.23242 7.43822 7.60204 7.83313 8.03141 8.20127 8.45023 8.63085 8.79457 8.97762 10.14453 Molecular weight = 220.09amu Principal moments of inertia in cm(-1) A = 0.021689 B = 0.013243 C = 0.008473 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1290.682164 B = 2113.868862 C = 3303.744044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.334 6.334 3 C 0.115 3.885 4 C -0.221 4.221 5 C -0.123 4.123 6 C -0.033 4.033 7 C 0.136 3.864 8 C -0.449 4.449 9 H 0.082 0.918 10 C 0.075 3.925 11 N -0.794 5.794 12 Si 0.911 3.089 13 H -0.263 1.263 14 H -0.278 1.278 15 H -0.264 1.264 16 C -0.230 4.230 17 O -0.305 6.305 18 C 0.051 3.949 19 C -0.102 4.102 20 H 0.056 0.944 21 H 0.045 0.955 22 H 0.080 0.920 23 H 0.098 0.902 24 H 0.281 0.719 25 H 0.137 0.863 26 H 0.086 0.914 27 H 0.058 0.942 28 H 0.073 0.927 29 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.370 -1.868 -2.126 3.691 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.249 6.249 3 C 0.072 3.928 4 C -0.241 4.241 5 C -0.124 4.124 6 C -0.077 4.077 7 C 0.133 3.867 8 C -0.479 4.479 9 H 0.100 0.900 10 C -0.143 4.143 11 N -0.419 5.419 12 Si 0.735 3.265 13 H -0.188 1.188 14 H -0.203 1.203 15 H -0.189 1.189 16 C -0.250 4.250 17 O -0.221 6.221 18 C -0.025 4.025 19 C -0.140 4.140 20 H 0.075 0.925 21 H 0.064 0.936 22 H 0.099 0.901 23 H 0.116 0.884 24 H 0.092 0.908 25 H 0.154 0.846 26 H 0.104 0.896 27 H 0.076 0.924 28 H 0.092 0.908 29 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 2.198 -1.896 -1.915 3.478 hybrid contribution -0.651 0.571 -0.116 0.874 sum 1.547 -1.325 -2.031 2.876 Atomic orbital electron populations 1.22790 0.79903 1.01526 1.01640 1.85872 1.20244 1.28666 1.90115 1.18622 0.91500 0.83528 0.99177 1.18593 0.90545 0.95147 1.19847 1.19940 0.93266 0.93401 1.05770 1.19713 0.91606 0.84109 1.12293 1.16677 0.86437 0.93488 0.90117 1.19464 0.96792 0.96534 1.35074 0.89972 1.25927 0.98811 0.97012 0.92501 1.69845 1.18876 1.31138 1.22077 0.86324 0.78756 0.81470 0.79974 1.18772 1.20301 1.18852 1.21098 0.99971 0.89904 1.14066 1.86755 1.19064 1.32491 1.83742 1.23539 0.85654 0.94315 0.98976 1.21632 0.94758 0.95977 1.01595 0.92522 0.93598 0.90120 0.88368 0.90818 0.84574 0.89587 0.92388 0.90820 0.90661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.68 9.81 101.05 0.99 1.67 15 2 O -0.33 -7.47 10.50 -19.62 -0.21 -7.67 15 3 C 0.12 2.87 6.69 -39.27 -0.26 2.61 15 4 C -0.22 -5.29 9.98 -39.28 -0.39 -5.69 15 5 C -0.12 -2.89 6.26 -104.13 -0.65 -3.54 15 6 C -0.03 -0.87 6.82 -38.08 -0.26 -1.13 15 7 C 0.14 3.77 5.59 -106.57 -0.60 3.17 15 8 C -0.45 -12.32 9.00 -37.85 -0.34 -12.66 15 9 H 0.08 2.23 7.91 -52.49 -0.42 1.82 15 10 C 0.08 1.90 5.13 -17.33 -0.09 1.81 15 11 N -0.79 -20.34 10.97 55.55 0.61 -19.73 15 12 Si 0.91 18.81 29.60 -169.99 -5.03 13.78 15 13 H -0.26 -5.38 7.11 56.52 0.40 -4.98 15 14 H -0.28 -5.52 7.11 56.52 0.40 -5.12 15 15 H -0.26 -5.44 7.11 56.52 0.40 -5.04 15 16 C -0.23 -6.08 7.66 -38.85 -0.30 -6.37 15 17 O -0.31 -7.39 11.06 -20.25 -0.22 -7.62 15 18 C 0.05 0.93 8.00 38.06 0.30 1.23 15 19 C -0.10 -1.88 7.12 -26.49 -0.19 -2.07 15 20 H 0.06 1.08 7.66 -51.93 -0.40 0.69 15 21 H 0.05 0.82 7.65 -51.93 -0.40 0.43 15 22 H 0.08 1.16 8.14 -51.93 -0.42 0.73 15 23 H 0.10 2.14 8.06 -52.49 -0.42 1.71 15 24 H 0.28 6.51 8.30 -40.82 -0.34 6.17 15 25 H 0.14 3.55 4.36 -52.49 -0.23 3.33 15 26 H 0.09 1.27 8.14 -51.93 -0.42 0.85 15 27 H 0.06 0.96 8.14 -51.93 -0.42 0.54 15 28 H 0.07 1.16 8.14 -51.93 -0.42 0.74 15 29 H 0.07 1.27 8.14 -51.93 -0.42 0.85 15 LS Contribution 250.15 15.07 3.77 3.77 Total: -1.00 -29.76 250.15 -5.97 -35.73 By element: Atomic # 1 Polarization: 5.82 SS G_CDS: -3.11 Total: 2.71 kcal Atomic # 6 Polarization: -19.19 SS G_CDS: -1.78 Total: -20.97 kcal Atomic # 7 Polarization: -20.34 SS G_CDS: 0.61 Total: -19.73 kcal Atomic # 8 Polarization: -14.86 SS G_CDS: -0.43 Total: -15.29 kcal Atomic # 14 Polarization: 18.81 SS G_CDS: -5.03 Total: 13.78 kcal Total LS contribution 3.77 Total: 3.77 kcal Total: -29.76 -5.97 -35.73 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261243140.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.080 kcal (2) G-P(sol) polarization free energy of solvation -29.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.973 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.730 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds