Wall clock time and date at job start Mon Mar 30 2020 02:28:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35545 * 116.99818 * 2 1 4 4 C 1.39200 * 120.43920 * 179.97438 * 3 2 1 5 5 C 1.40603 * 118.08554 * 179.97438 * 4 3 2 6 6 C 1.41600 * 120.62619 * 179.97438 * 5 4 3 7 7 H 1.08002 * 120.00535 * 0.02562 * 6 5 4 8 8 C 1.40085 * 119.99585 * 180.02562 * 6 5 4 9 9 N 1.30682 * 120.00113 * 0.02562 * 8 6 5 10 10 Si 1.86801 * 120.00004 * 180.02562 * 8 6 5 11 11 H 1.48497 * 109.47086 * 59.99702 * 10 8 6 12 12 H 1.48499 * 109.47253 * 180.02562 * 10 8 6 13 13 H 1.48507 * 109.47038 * 300.00271 * 10 8 6 14 14 N 1.34187 * 118.73959 * 0.02562 * 5 4 3 15 15 C 1.31349 * 120.73012 * 359.97438 * 14 5 4 16 16 C 1.50705 * 118.93664 * 180.02562 * 15 14 5 17 17 C 1.52994 * 117.49764 * 188.74801 * 16 15 14 18 18 C 1.53000 * 117.49932 * 120.08506 * 16 15 14 19 19 N 1.32028 * 122.12700 * 359.74000 * 15 14 5 20 20 H 1.08996 * 109.47352 * 299.99674 * 1 2 3 21 21 H 1.08996 * 109.47452 * 60.00127 * 1 2 3 22 22 H 1.09006 * 109.46808 * 179.97438 * 1 2 3 23 23 H 1.07991 * 120.95857 * 359.95473 * 4 3 2 24 24 H 0.97001 * 120.00488 * 179.97438 * 9 8 6 25 25 H 1.09005 * 115.54571 * 334.41972 * 16 15 14 26 26 H 1.08998 * 117.50607 * 359.97438 * 17 16 15 27 27 H 1.09003 * 117.49747 * 145.02272 * 17 16 15 28 28 H 1.08997 * 117.49904 * 214.97969 * 18 16 15 29 29 H 1.09002 * 117.49691 * 359.97438 * 18 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0443 1.2077 0.0000 4 6 3.4338 1.2913 0.0005 5 6 4.0201 2.5692 0.0000 6 6 5.4284 2.7168 0.0010 7 1 6.0630 1.8429 0.0018 8 6 5.9985 3.9964 0.0010 9 7 5.2307 5.0538 0.0004 10 14 7.8563 4.1912 0.0016 11 1 8.4221 3.5463 -1.2105 12 1 8.2027 5.6352 0.0021 13 1 8.4212 3.5468 1.2145 14 7 3.2198 3.6463 -0.0006 15 6 1.9132 3.5116 -0.0010 16 6 1.0526 4.7488 -0.0022 17 6 -0.4520 4.5629 0.2037 18 6 0.0912 4.9395 -1.1770 19 7 1.3294 2.3274 -0.0061 20 1 -0.3634 0.5138 0.8900 21 1 -0.3634 0.5138 -0.8899 22 1 -0.3633 -1.0277 -0.0005 23 1 4.0439 0.4002 0.0017 24 1 5.6254 5.9399 0.0008 25 1 1.5123 5.6415 0.4221 26 1 -0.8196 3.5458 0.3396 27 1 -0.9824 5.3335 0.7631 28 1 -0.0820 5.9577 -1.5254 29 1 0.0815 4.1703 -1.9493 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260613196.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:28:49 Heat of formation + Delta-G solvation = 25.997607 kcal Electronic energy + Delta-G solvation = -14560.098352 eV Core-core repulsion = 12063.476489 eV Total energy + Delta-G solvation = -2496.621863 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 220.095 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -39.44015 -37.44755 -36.04038 -33.77676 -31.01603 -30.13727 -27.19568 -25.73866 -23.64598 -21.90879 -21.61592 -20.00877 -17.81696 -17.09862 -15.45917 -15.11083 -15.09376 -14.78368 -13.79866 -13.59719 -13.41882 -12.90621 -12.74914 -11.62495 -11.36952 -11.23967 -11.17397 -11.00124 -10.78101 -10.74224 -10.32090 -10.01621 -9.84280 -9.38666 -8.97931 -8.40183 -7.58108 -7.55912 -6.53545 -4.81400 2.59418 2.89658 3.02885 3.05086 3.21284 3.84048 4.08408 4.40374 4.78137 5.05900 5.46872 5.54377 5.63086 5.75796 5.83421 6.00602 6.07078 6.12243 6.27478 6.32310 6.70278 6.74552 6.86640 6.95253 7.00586 7.17709 7.33335 8.00439 8.21817 8.54568 8.72875 8.96193 10.07136 10.19474 Molecular weight = 220.10amu Principal moments of inertia in cm(-1) A = 0.028975 B = 0.009806 C = 0.007487 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 966.123100 B = 2854.736580 C = 3738.837429 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 O -0.322 6.322 3 C 0.344 3.656 4 C -0.348 4.348 5 C 0.288 3.712 6 C -0.415 4.415 7 H 0.089 0.911 8 C 0.069 3.931 9 N -0.704 5.704 10 Si 0.913 3.087 11 H -0.263 1.263 12 H -0.276 1.276 13 H -0.263 1.263 14 N -0.517 5.517 15 C 0.365 3.635 16 C -0.071 4.071 17 C -0.165 4.165 18 C -0.165 4.165 19 N -0.663 5.663 20 H 0.049 0.951 21 H 0.049 0.951 22 H 0.079 0.921 23 H 0.112 0.888 24 H 0.277 0.723 25 H 0.118 0.882 26 H 0.102 0.898 27 H 0.086 0.914 28 H 0.090 0.910 29 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.803 -0.307 -0.277 4.821 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 O -0.230 6.230 3 C 0.165 3.835 4 C -0.375 4.375 5 C 0.162 3.838 6 C -0.448 4.448 7 H 0.107 0.893 8 C -0.159 4.159 9 N -0.325 5.325 10 Si 0.737 3.263 11 H -0.187 1.187 12 H -0.200 1.200 13 H -0.187 1.187 14 N -0.239 5.239 15 C 0.094 3.906 16 C -0.091 4.091 17 C -0.203 4.203 18 C -0.203 4.203 19 N -0.401 5.401 20 H 0.068 0.932 21 H 0.068 0.932 22 H 0.098 0.902 23 H 0.130 0.870 24 H 0.088 0.912 25 H 0.136 0.864 26 H 0.121 0.879 27 H 0.105 0.895 28 H 0.108 0.892 29 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -5.191 0.401 -0.278 5.214 hybrid contribution 1.092 -0.623 -0.013 1.257 sum -4.099 -0.223 -0.291 4.116 Atomic orbital electron populations 1.22555 0.79480 1.00991 1.01700 1.86149 1.21231 1.26618 1.88954 1.19616 0.89144 0.83791 0.90953 1.21458 0.91104 0.99570 1.25321 1.18538 0.93753 0.85216 0.86320 1.19623 0.89864 0.93439 1.41857 0.89260 1.26139 1.00715 0.95624 0.93383 1.70084 1.36825 0.98895 1.26671 0.86286 0.81720 0.78198 0.80100 1.18730 1.20043 1.18729 1.69061 1.01871 1.32144 1.20840 1.21432 0.89154 0.88969 0.91012 1.20452 0.89361 0.95853 1.03418 1.22879 0.95658 1.02774 0.98965 1.22819 1.03936 1.01634 0.91913 1.67318 1.41400 0.98395 1.32996 0.93203 0.93240 0.90230 0.87014 0.91155 0.86379 0.87926 0.89520 0.89160 0.89276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.83 10.41 101.05 1.05 1.88 15 2 O -0.32 -7.06 10.49 -18.33 -0.19 -7.26 15 3 C 0.34 8.61 7.53 -16.76 -0.13 8.48 15 4 C -0.35 -9.15 9.91 -38.33 -0.38 -9.53 15 5 C 0.29 8.07 6.58 -84.66 -0.56 7.51 15 6 C -0.41 -11.01 9.19 -37.61 -0.35 -11.36 15 7 H 0.09 2.20 7.85 -52.49 -0.41 1.78 15 8 C 0.07 1.71 5.50 -17.35 -0.10 1.62 15 9 N -0.70 -18.24 11.52 55.55 0.64 -17.60 15 10 Si 0.91 18.03 29.56 -169.99 -5.02 13.01 15 11 H -0.26 -5.12 7.11 56.52 0.40 -4.72 15 12 H -0.28 -5.28 7.11 56.52 0.40 -4.88 15 13 H -0.26 -5.12 7.11 56.52 0.40 -4.72 15 14 N -0.52 -14.43 7.93 -8.73 -0.07 -14.50 15 15 C 0.37 9.22 7.31 -157.37 -1.15 8.07 15 16 C -0.07 -1.46 6.23 -91.77 -0.57 -2.03 15 17 C -0.16 -2.79 10.01 -26.69 -0.27 -3.05 15 18 C -0.16 -2.85 10.24 -26.69 -0.27 -3.12 15 19 N -0.66 -16.24 8.26 -10.85 -0.09 -16.33 15 20 H 0.05 0.84 8.12 -51.93 -0.42 0.42 15 21 H 0.05 0.84 8.11 -51.93 -0.42 0.41 15 22 H 0.08 1.05 8.14 -51.93 -0.42 0.63 15 23 H 0.11 2.76 8.06 -52.49 -0.42 2.33 15 24 H 0.28 6.46 8.29 -40.82 -0.34 6.12 15 25 H 0.12 2.41 8.14 -51.93 -0.42 1.99 15 26 H 0.10 1.83 7.53 -51.93 -0.39 1.44 15 27 H 0.09 1.23 8.14 -51.93 -0.42 0.80 15 28 H 0.09 1.33 8.14 -51.93 -0.42 0.90 15 29 H 0.09 1.64 8.14 -51.93 -0.42 1.21 15 LS Contribution 260.65 15.07 3.93 3.93 Total: -1.00 -29.70 260.65 -6.84 -36.54 By element: Atomic # 1 Polarization: 7.06 SS G_CDS: -3.32 Total: 3.74 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -2.71 Total: -1.53 kcal Atomic # 7 Polarization: -48.91 SS G_CDS: 0.48 Total: -48.42 kcal Atomic # 8 Polarization: -7.06 SS G_CDS: -0.19 Total: -7.26 kcal Atomic # 14 Polarization: 18.03 SS G_CDS: -5.02 Total: 13.01 kcal Total LS contribution 3.93 Total: 3.93 kcal Total: -29.70 -6.84 -36.54 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260613196.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.539 kcal (2) G-P(sol) polarization free energy of solvation -29.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.542 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds