Wall clock time and date at job start Mon Mar 30 2020 02:25:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 N 1.40223 * 125.89731 * 2 1 4 4 C 1.30018 * 109.76309 * 180.02562 * 3 2 1 5 5 C 1.41563 * 108.29747 * 0.15266 * 4 3 2 6 6 C 1.37563 * 125.89535 * 180.02562 * 2 1 3 7 7 C 1.39498 * 126.94818 * 359.83098 * 6 2 1 8 8 H 1.08001 * 119.99848 * 218.55010 * 7 6 2 9 9 C 1.40689 * 119.99925 * 38.54764 * 7 6 2 10 10 N 1.30436 * 120.00339 * 18.58998 * 9 7 6 11 11 Si 1.86803 * 119.99949 * 198.58525 * 9 7 6 12 12 H 1.48499 * 109.46882 * 60.00298 * 11 9 7 13 13 H 1.48499 * 109.47037 * 180.02562 * 11 9 7 14 14 H 1.48499 * 109.47336 * 300.00308 * 11 9 7 15 15 C 1.46708 * 121.54291 * 179.68546 * 5 4 3 16 16 O 1.21390 * 122.47275 * 168.53715 * 15 5 4 17 17 C 1.52144 * 115.05739 * 348.55937 * 15 5 4 18 18 C 1.53155 * 108.67561 * 42.91502 * 17 15 5 19 19 C 1.50882 * 129.17820 * 180.27074 * 4 3 2 20 20 H 1.08998 * 109.47027 * 90.85236 * 1 2 3 21 21 H 1.08998 * 109.47401 * 210.85807 * 1 2 3 22 22 H 1.09004 * 109.47037 * 330.86490 * 1 2 3 23 23 H 0.97001 * 120.00461 * 174.70778 * 10 9 7 24 24 H 1.08993 * 109.63486 * 162.72254 * 17 15 5 25 25 H 1.09002 * 109.62937 * 283.11653 * 17 15 5 26 26 H 1.09001 * 109.20911 * 54.87912 * 18 17 15 27 27 H 1.09004 * 109.21126 * 174.20174 * 18 17 15 28 28 H 1.09003 * 109.52599 * 279.43034 * 19 4 3 29 29 H 1.09007 * 109.52304 * 39.56000 * 19 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 7 2.2871 1.1359 0.0000 4 6 3.5361 0.7746 -0.0005 5 6 3.5895 -0.6400 -0.0045 6 6 2.2715 -1.1144 -0.0005 7 6 1.8600 -2.4473 0.0022 8 1 2.4010 -3.1783 0.5847 9 6 0.7402 -2.8393 -0.7539 10 7 0.3074 -2.0786 -1.7211 11 14 -0.1269 -4.4494 -0.3728 12 1 -0.6291 -4.4225 1.0245 13 1 -1.2679 -4.6301 -1.3060 14 1 0.8272 -5.5758 -0.5343 15 6 4.8679 -1.3597 -0.0129 16 8 4.9445 -2.5546 0.1871 17 6 6.0907 -0.4980 -0.2903 18 6 5.9631 0.8048 0.5047 19 6 4.7767 1.6333 0.0048 20 1 -0.3633 -0.0153 -1.0275 21 1 -0.3634 -0.8822 0.5271 22 1 -0.3633 0.8977 0.5004 23 1 -0.4155 -2.3833 -2.2915 24 1 6.9908 -1.0291 0.0191 25 1 6.1462 -0.2730 -1.3554 26 1 5.8133 0.5688 1.5582 27 1 6.8802 1.3836 0.3943 28 1 4.9815 1.9839 -1.0068 29 1 4.6249 2.4887 0.6631 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261079465.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:25:20 Heat of formation + Delta-G solvation = 7.004449 kcal Electronic energy + Delta-G solvation = -14976.249333 eV Core-core repulsion = 12478.803866 eV Total energy + Delta-G solvation = -2497.445468 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 220.095 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -39.63586 -37.26058 -35.05852 -33.67635 -30.99268 -29.76620 -27.68230 -26.06791 -24.75920 -21.62600 -20.71808 -19.36628 -17.42102 -16.85656 -15.40927 -14.97619 -14.44805 -14.06159 -13.79443 -13.33861 -13.29421 -12.83357 -12.55602 -12.15110 -11.78588 -11.49104 -11.31084 -11.14797 -10.94756 -10.78602 -10.61612 -10.39774 -10.25196 -9.36360 -9.14246 -8.17664 -7.77125 -7.09468 -7.03124 -4.81843 2.74897 2.97752 3.02417 3.07368 3.49556 3.80332 3.93620 4.32577 4.91364 5.14420 5.41910 5.55719 5.81364 5.88715 6.09680 6.11602 6.23558 6.28066 6.36340 6.39317 6.64067 6.67432 6.95489 6.98498 7.10902 7.45425 7.64260 8.13367 8.27224 8.46892 8.92384 9.09605 9.33669 9.92334 Molecular weight = 220.10amu Principal moments of inertia in cm(-1) A = 0.034714 B = 0.011269 C = 0.008950 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 806.408096 B = 2484.112698 C = 3127.707379 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.141 3.859 2 N -0.407 5.407 3 N -0.350 5.350 4 C 0.109 3.891 5 C -0.435 4.435 6 C 0.339 3.661 7 C -0.445 4.445 8 H 0.108 0.892 9 C 0.078 3.922 10 N -0.790 5.790 11 Si 0.918 3.082 12 H -0.260 1.260 13 H -0.277 1.277 14 H -0.259 1.259 15 C 0.427 3.573 16 O -0.509 6.509 17 C -0.158 4.158 18 C -0.102 4.102 19 C -0.032 4.032 20 H 0.068 0.932 21 H 0.066 0.934 22 H 0.051 0.949 23 H 0.289 0.711 24 H 0.073 0.927 25 H 0.084 0.916 26 H 0.063 0.937 27 H 0.066 0.934 28 H 0.074 0.926 29 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.075 3.244 1.337 4.076 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.002 4.002 2 N -0.193 5.193 3 N -0.169 5.169 4 C -0.062 4.062 5 C -0.448 4.448 6 C 0.218 3.782 7 C -0.480 4.480 8 H 0.126 0.874 9 C -0.143 4.143 10 N -0.417 5.417 11 Si 0.741 3.259 12 H -0.185 1.185 13 H -0.201 1.201 14 H -0.183 1.183 15 C 0.312 3.688 16 O -0.391 6.391 17 C -0.196 4.196 18 C -0.140 4.140 19 C -0.071 4.071 20 H 0.086 0.914 21 H 0.084 0.916 22 H 0.069 0.931 23 H 0.100 0.900 24 H 0.092 0.908 25 H 0.103 0.897 26 H 0.082 0.918 27 H 0.085 0.915 28 H 0.092 0.908 29 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.971 3.732 1.308 4.072 hybrid contribution -0.099 -1.262 -0.178 1.278 sum 0.872 2.470 1.130 2.852 Atomic orbital electron populations 1.21384 0.76384 1.00274 1.02168 1.48706 1.04713 1.02451 1.63395 1.76157 1.01328 1.10146 1.29252 1.21977 0.92676 0.93644 0.97900 1.20270 0.93913 0.92774 1.37793 1.18027 0.87090 0.87755 0.85321 1.18932 1.09867 0.92454 1.26771 0.87417 1.26110 0.95083 0.99523 0.93595 1.69625 1.23199 1.37153 1.11705 0.86184 0.78861 0.81278 0.79583 1.18473 1.20144 1.18341 1.21259 0.88462 0.87134 0.71975 1.90415 1.88670 1.16918 1.43059 1.22218 0.98679 0.97112 1.01574 1.21364 0.97274 0.95205 1.00146 1.19868 0.89651 0.96113 1.01511 0.91355 0.91553 0.93058 0.90020 0.90799 0.89728 0.91832 0.91510 0.90760 0.90981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.14 3.10 9.58 59.84 0.57 3.67 15 2 N -0.41 -10.53 4.03 -65.49 -0.26 -10.79 15 3 N -0.35 -8.82 12.44 33.93 0.42 -8.39 15 4 C 0.11 2.55 7.21 -82.00 -0.59 1.96 15 5 C -0.44 -11.32 6.11 -104.52 -0.64 -11.96 15 6 C 0.34 9.31 6.17 -84.13 -0.52 8.79 15 7 C -0.45 -12.02 8.63 -38.19 -0.33 -12.35 15 8 H 0.11 2.98 7.68 -52.49 -0.40 2.58 15 9 C 0.08 1.90 4.21 -17.22 -0.07 1.82 15 10 N -0.79 -19.38 10.55 55.59 0.59 -18.80 15 11 Si 0.92 18.24 29.61 -169.99 -5.03 13.20 15 12 H -0.26 -5.07 7.11 56.52 0.40 -4.67 15 13 H -0.28 -5.24 7.11 56.52 0.40 -4.84 15 14 H -0.26 -5.26 7.11 56.52 0.40 -4.86 15 15 C 0.43 10.33 7.08 -30.17 -0.21 10.12 15 16 O -0.51 -13.79 17.30 5.46 0.09 -13.69 15 17 C -0.16 -2.83 6.13 -27.09 -0.17 -2.99 15 18 C -0.10 -1.58 5.79 -26.60 -0.15 -1.73 15 19 C -0.03 -0.56 6.25 -27.75 -0.17 -0.73 15 20 H 0.07 1.52 6.94 -51.93 -0.36 1.16 15 21 H 0.07 1.42 7.13 -51.93 -0.37 1.05 15 22 H 0.05 0.99 8.14 -51.93 -0.42 0.57 15 23 H 0.29 6.39 8.30 -40.82 -0.34 6.05 15 24 H 0.07 1.19 8.14 -51.93 -0.42 0.77 15 25 H 0.08 1.42 8.14 -51.93 -0.42 0.99 15 26 H 0.06 1.02 8.14 -51.93 -0.42 0.60 15 27 H 0.07 0.80 8.14 -51.93 -0.42 0.37 15 28 H 0.07 1.17 8.14 -51.93 -0.42 0.75 15 29 H 0.07 1.12 8.14 -51.92 -0.42 0.69 15 LS Contribution 249.43 15.07 3.76 3.76 Total: -1.00 -30.95 249.43 -5.95 -36.90 By element: Atomic # 1 Polarization: 4.44 SS G_CDS: -3.23 Total: 1.22 kcal Atomic # 6 Polarization: -1.12 SS G_CDS: -2.28 Total: -3.40 kcal Atomic # 7 Polarization: -38.73 SS G_CDS: 0.74 Total: -37.98 kcal Atomic # 8 Polarization: -13.79 SS G_CDS: 0.09 Total: -13.69 kcal Atomic # 14 Polarization: 18.24 SS G_CDS: -5.03 Total: 13.20 kcal Total LS contribution 3.76 Total: 3.76 kcal Total: -30.95 -5.95 -36.90 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261079465.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.906 kcal (2) G-P(sol) polarization free energy of solvation -30.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.947 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.901 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds