Wall clock time and date at job start Mon Mar 30 2020 03:25:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46506 * 119.99600 * 2 1 4 4 C 1.53001 * 109.46983 * 269.99839 * 3 2 1 5 5 C 1.50706 * 109.46715 * 179.97438 * 4 3 2 6 6 H 1.07993 * 119.99916 * 0.02562 * 5 4 3 7 7 C 1.37878 * 119.99435 * 179.97438 * 5 4 3 8 8 N 1.31514 * 119.99623 * 179.97438 * 7 5 4 9 9 Si 1.86797 * 120.00493 * 0.02562 * 7 5 4 10 10 H 1.48500 * 109.47180 * 89.99375 * 9 7 5 11 11 H 1.48498 * 109.47487 * 209.99710 * 9 7 5 12 12 H 1.48503 * 109.47026 * 329.99588 * 9 7 5 13 13 C 1.39997 * 120.00454 * 180.02562 * 2 1 3 14 14 C 1.38865 * 119.99690 * 359.97438 * 13 2 1 15 15 C 1.38095 * 119.99639 * 179.97438 * 14 13 2 16 16 C 1.38860 * 120.00056 * 0.02562 * 15 14 13 17 17 N 1.40002 * 119.99648 * 179.97438 * 16 15 14 18 18 C 1.38859 * 120.00162 * 0.25475 * 16 15 14 19 19 C 1.38096 * 119.99885 * 359.45299 * 18 16 15 20 20 H 1.09000 * 109.47189 * 269.99735 * 1 2 3 21 21 H 1.08999 * 109.47653 * 30.00339 * 1 2 3 22 22 H 1.09003 * 109.46494 * 150.00375 * 1 2 3 23 23 H 1.08998 * 109.47102 * 29.99801 * 3 2 1 24 24 H 1.09002 * 109.46900 * 149.99874 * 3 2 1 25 25 H 1.08998 * 109.47170 * 299.99921 * 4 3 2 26 26 H 1.08997 * 109.46836 * 60.00429 * 4 3 2 27 27 H 0.97003 * 119.99935 * 180.02562 * 8 7 5 28 28 H 1.07990 * 120.00111 * 359.95208 * 14 13 2 29 29 H 1.08001 * 119.99524 * 179.97438 * 15 14 13 30 30 H 0.97001 * 120.00450 * 0.02562 * 17 16 15 31 31 H 0.97005 * 119.99826 * 179.72430 * 17 16 15 32 32 H 1.07999 * 119.99975 * 179.73042 * 18 16 15 33 33 H 1.07991 * 119.99804 * 180.27223 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.4524 1.7105 -1.4425 5 6 3.2053 3.0160 -1.4425 6 1 3.4753 3.4836 -0.5072 7 6 3.5503 3.6128 -2.6365 8 7 4.2069 4.7523 -2.6365 9 14 3.0840 2.8036 -4.2543 10 1 1.7478 3.2889 -4.6835 11 1 4.0918 3.1485 -5.2890 12 1 3.0417 1.3298 -4.0765 13 6 2.1651 -1.2124 -0.0005 14 6 1.4708 -2.4150 -0.0005 15 6 2.1614 -3.6109 -0.0016 16 6 3.5500 -3.6107 -0.0021 17 7 4.2500 -4.8232 -0.0027 18 6 4.2442 -2.4082 0.0037 19 6 3.5537 -1.2122 -0.0013 20 1 -0.3633 0.0000 1.0277 21 1 -0.3634 0.8899 -0.5139 22 1 -0.3632 -0.8901 -0.5138 23 1 1.6083 2.0284 0.5138 24 1 3.1499 1.1385 0.5139 25 1 3.0416 0.9509 -1.9563 26 1 1.5000 1.8408 -1.9563 27 1 4.4493 5.1724 -3.4766 28 1 0.3909 -2.4150 0.0007 29 1 1.6214 -4.5462 -0.0012 30 1 3.7651 -5.6633 -0.0031 31 1 5.2200 -4.8231 -0.0071 32 1 5.3242 -2.4081 0.0077 33 1 4.0936 -0.2770 -0.0012 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020374371.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:25:23 Heat of formation + Delta-G solvation = 30.133434 kcal Electronic energy + Delta-G solvation = -14487.951358 eV Core-core repulsion = 12127.341932 eV Total energy + Delta-G solvation = -2360.609425 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 220.127 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.25686 -36.56841 -33.59582 -32.68110 -30.98780 -29.97283 -27.86499 -26.15659 -23.65052 -22.19871 -21.04921 -19.75814 -17.29517 -16.85638 -16.46850 -15.76731 -14.63586 -14.36182 -14.22838 -13.78049 -13.28578 -12.89438 -12.69897 -12.60236 -12.45606 -11.96901 -11.65475 -11.49305 -10.97521 -10.82274 -10.45089 -10.12520 -9.87925 -9.78331 -9.22909 -8.56992 -8.52780 -8.29705 -6.24489 -6.05457 -4.04094 1.79988 2.20348 3.31443 3.39197 3.46154 3.78732 4.17704 4.35336 4.45965 5.20199 5.29173 5.31248 5.51890 5.71462 5.81298 5.86968 5.95761 6.07284 6.08763 6.37919 6.45207 6.58961 6.62666 6.71464 6.85027 7.11420 7.25911 7.35862 7.69555 7.76852 7.98802 8.01177 8.16729 8.50605 8.98333 9.57456 11.07580 Molecular weight = 220.13amu Principal moments of inertia in cm(-1) A = 0.031445 B = 0.007222 C = 0.006606 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 890.243431 B = 3875.987080 C = 4237.482935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.099 3.901 2 N -0.637 5.637 3 C 0.136 3.864 4 C -0.028 4.028 5 C -0.521 4.521 6 H 0.073 0.927 7 C 0.070 3.930 8 N -0.903 5.903 9 Si 0.878 3.122 10 H -0.278 1.278 11 H -0.288 1.288 12 H -0.265 1.265 13 C 0.178 3.822 14 C -0.163 4.163 15 C -0.152 4.152 16 C 0.144 3.856 17 N -0.892 5.892 18 C -0.146 4.146 19 C -0.145 4.145 20 H 0.038 0.962 21 H 0.064 0.936 22 H 0.058 0.942 23 H 0.064 0.936 24 H 0.067 0.933 25 H 0.020 0.980 26 H 0.011 0.989 27 H 0.263 0.737 28 H 0.117 0.883 29 H 0.111 0.889 30 H 0.390 0.610 31 H 0.391 0.609 32 H 0.115 0.885 33 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.114 -16.293 5.183 17.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.045 4.045 2 N -0.348 5.348 3 C 0.014 3.986 4 C -0.066 4.066 5 C -0.560 4.560 6 H 0.091 0.909 7 C -0.132 4.132 8 N -0.541 5.541 9 Si 0.706 3.294 10 H -0.204 1.204 11 H -0.214 1.214 12 H -0.189 1.189 13 C 0.076 3.924 14 C -0.187 4.187 15 C -0.175 4.175 16 C 0.042 3.958 17 N -0.434 5.434 18 C -0.169 4.169 19 C -0.168 4.168 20 H 0.057 0.943 21 H 0.083 0.917 22 H 0.077 0.923 23 H 0.082 0.918 24 H 0.085 0.915 25 H 0.038 0.962 26 H 0.029 0.971 27 H 0.073 0.927 28 H 0.135 0.865 29 H 0.129 0.871 30 H 0.217 0.783 31 H 0.218 0.782 32 H 0.133 0.867 33 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -4.181 -15.897 5.080 17.205 hybrid contribution -0.030 -0.555 -1.046 1.185 sum -4.211 -16.452 4.034 17.455 Atomic orbital electron populations 1.21481 0.80952 1.02035 1.00045 1.46714 1.04251 1.03502 1.80374 1.21516 0.95557 0.82359 0.99171 1.19956 0.96592 0.97006 0.93084 1.21033 1.35747 1.04640 0.94557 0.90913 1.24979 0.94495 0.94586 0.99110 1.69912 1.39907 1.17399 1.26922 0.86793 0.78290 0.80719 0.83635 1.20376 1.21383 1.18908 1.17739 0.91212 0.85886 0.97570 1.20384 0.98990 0.90763 1.08515 1.20206 0.91918 0.97359 1.08017 1.17544 0.91190 0.86259 1.00780 1.42269 1.08166 1.04726 1.88287 1.20350 0.98860 0.90770 1.06875 1.20677 0.92435 0.98316 1.05391 0.94331 0.91707 0.92328 0.91774 0.91458 0.96194 0.97096 0.92714 0.86511 0.87091 0.78335 0.78172 0.86712 0.85222 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.44 10.19 59.85 0.61 2.04 16 2 N -0.64 -11.41 3.02 -179.54 -0.54 -11.95 16 3 C 0.14 2.75 5.10 -4.04 -0.02 2.73 16 4 C -0.03 -0.67 4.37 -27.88 -0.12 -0.79 16 5 C -0.52 -14.79 9.66 -34.44 -0.33 -15.12 16 6 H 0.07 2.19 7.99 -52.49 -0.42 1.77 16 7 C 0.07 2.04 5.47 -17.82 -0.10 1.95 16 8 N -0.90 -27.87 13.96 55.43 0.77 -27.10 16 9 Si 0.88 22.20 27.47 -169.99 -4.67 17.54 16 10 H -0.28 -6.89 7.11 56.52 0.40 -6.49 16 11 H -0.29 -7.19 7.11 56.52 0.40 -6.79 16 12 H -0.26 -6.60 6.54 56.52 0.37 -6.23 16 13 C 0.18 3.13 6.56 -83.67 -0.55 2.59 16 14 C -0.16 -2.50 9.20 -39.40 -0.36 -2.86 16 15 C -0.15 -2.13 9.89 -39.40 -0.39 -2.52 16 16 C 0.14 2.03 6.76 -83.67 -0.57 1.46 16 17 N -0.89 -9.26 9.10 32.46 0.30 -8.97 16 18 C -0.15 -2.25 9.89 -39.40 -0.39 -2.64 16 19 C -0.15 -2.56 9.20 -39.40 -0.36 -2.93 16 20 H 0.04 0.50 8.14 -51.93 -0.42 0.08 16 21 H 0.06 0.94 8.07 -51.93 -0.42 0.53 16 22 H 0.06 0.76 6.20 -51.93 -0.32 0.44 16 23 H 0.06 1.26 8.07 -51.93 -0.42 0.84 16 24 H 0.07 1.35 6.20 -51.93 -0.32 1.03 16 25 H 0.02 0.50 7.20 -51.93 -0.37 0.13 16 26 H 0.01 0.26 7.57 -51.93 -0.39 -0.13 16 27 H 0.26 7.62 8.31 -40.82 -0.34 7.28 16 28 H 0.12 1.57 6.14 -52.49 -0.32 1.25 16 29 H 0.11 1.28 8.06 -52.49 -0.42 0.85 16 30 H 0.39 3.25 8.84 -40.82 -0.36 2.89 16 31 H 0.39 3.44 8.84 -40.82 -0.36 3.08 16 32 H 0.11 1.55 8.06 -52.49 -0.42 1.13 16 33 H 0.13 2.41 6.14 -52.49 -0.32 2.09 16 LS Contribution 274.42 15.07 4.14 4.14 Total: -1.00 -31.65 274.42 -7.06 -38.70 By element: Atomic # 1 Polarization: 8.20 SS G_CDS: -4.47 Total: 3.73 kcal Atomic # 6 Polarization: -13.51 SS G_CDS: -2.58 Total: -16.10 kcal Atomic # 7 Polarization: -48.54 SS G_CDS: 0.53 Total: -48.01 kcal Atomic # 14 Polarization: 22.20 SS G_CDS: -4.67 Total: 17.54 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -31.65 -7.06 -38.70 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020374371.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.838 kcal (2) G-P(sol) polarization free energy of solvation -31.647 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.191 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.705 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds