Wall clock time and date at job start Mon Mar 30 2020 03:35:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 C 1.50695 * 109.47489 * 30.48227 * 3 2 1 5 5 C 1.37604 * 120.12508 * 265.28060 * 4 3 2 6 6 C 1.38655 * 120.28658 * 180.27949 * 5 4 3 7 7 C 1.38579 * 120.52265 * 359.71861 * 6 5 4 8 8 C 1.37770 * 120.23264 * 0.02562 * 7 6 5 9 9 Cl 1.73601 * 120.14408 * 179.97438 * 8 7 6 10 10 C 1.40708 * 120.11863 * 85.00240 * 4 3 2 11 11 C 1.41338 * 120.25507 * 359.97438 * 10 4 3 12 12 H 1.08004 * 119.99630 * 315.26432 * 11 10 4 13 13 C 1.39937 * 119.99888 * 135.26263 * 11 10 4 14 14 N 1.30832 * 120.00543 * 338.80098 * 13 11 10 15 15 Si 1.86800 * 119.99710 * 158.80380 * 13 11 10 16 16 H 1.48494 * 109.47532 * 0.02562 * 15 13 11 17 17 H 1.48502 * 109.47254 * 120.00126 * 15 13 11 18 18 H 1.48503 * 109.47169 * 239.99936 * 15 13 11 19 19 H 1.09008 * 109.46997 * 270.48365 * 3 2 1 20 20 H 1.08996 * 109.47068 * 150.48982 * 3 2 1 21 21 H 1.08004 * 119.85803 * 359.97438 * 5 4 3 22 22 H 1.08002 * 119.73942 * 179.69602 * 6 5 4 23 23 H 1.08002 * 119.87987 * 180.02562 * 7 6 5 24 24 H 0.96993 * 120.00557 * 184.45980 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 6 3.1109 -1.2235 -0.7207 5 6 3.4340 -2.3580 -0.0122 6 6 3.9025 -3.4843 -0.6713 7 6 4.0459 -3.4845 -2.0497 8 6 3.7238 -2.3621 -2.7808 9 17 3.9049 -2.3646 -4.5073 10 6 3.2463 -1.2125 -2.1212 11 6 2.9114 -0.0550 -2.8600 12 1 1.9995 0.4805 -2.6407 13 6 3.7615 0.3971 -3.8755 14 7 5.0196 0.0382 -3.8838 15 14 3.0998 1.5132 -5.2194 16 1 1.6564 1.7701 -4.9835 17 1 3.8403 2.8003 -5.2030 18 1 3.2770 0.8570 -6.5397 19 1 2.9713 -0.0079 1.0277 20 1 2.9708 0.8951 -0.5062 21 1 3.3268 -2.3696 1.0624 22 1 4.1581 -4.3684 -0.1060 23 1 4.4114 -4.3677 -2.5525 24 1 5.6235 0.4025 -4.5496 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000115771380.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:35:33 Heat of formation + Delta-G solvation = 27.374990 kcal Electronic energy + Delta-G solvation = -12331.514811 eV Core-core repulsion = 10042.110084 eV Total energy + Delta-G solvation = -2289.404727 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 221.030 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -38.16161 -35.84065 -34.85926 -33.64704 -31.78248 -29.71103 -27.08566 -25.09393 -21.22330 -20.42858 -17.46344 -16.75269 -15.43920 -15.01825 -14.53282 -14.10628 -13.12428 -12.99586 -12.77990 -12.43456 -11.90270 -11.76558 -11.42938 -11.26994 -10.99982 -10.87221 -10.55927 -10.24518 -10.05502 -9.85187 -9.50331 -8.69297 -7.61607 -7.20471 -6.80477 -4.54865 2.44707 2.64645 3.07855 3.12261 3.16094 3.48215 3.50670 3.80341 3.95964 4.50676 4.86502 5.33149 5.84521 5.85882 6.05092 6.25736 6.39493 6.48588 6.86373 7.11906 7.15764 7.44668 7.54496 7.76020 7.90928 8.26016 8.30255 8.61983 8.77755 10.17141 Molecular weight = 221.03amu Principal moments of inertia in cm(-1) A = 0.022757 B = 0.015231 C = 0.010292 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1230.098647 B = 1837.931473 C = 2720.012332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.474 5.474 2 C 0.231 3.769 3 C 0.036 3.964 4 C -0.180 4.180 5 C -0.079 4.079 6 C -0.224 4.224 7 C -0.087 4.087 8 C -0.075 4.075 9 Cl -0.096 7.096 10 C 0.137 3.863 11 C -0.480 4.480 12 H 0.083 0.917 13 C 0.097 3.903 14 N -0.771 5.771 15 Si 0.892 3.108 16 H -0.260 1.260 17 H -0.275 1.275 18 H -0.271 1.271 19 H 0.096 0.904 20 H 0.118 0.882 21 H 0.099 0.901 22 H 0.100 0.900 23 H 0.101 0.899 24 H 0.282 0.718 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.785 -0.726 2.242 2.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.152 5.152 2 C -0.086 4.086 3 C -0.004 4.004 4 C -0.183 4.183 5 C -0.097 4.097 6 C -0.243 4.243 7 C -0.106 4.106 8 C -0.102 4.102 9 Cl -0.068 7.068 10 C 0.134 3.866 11 C -0.508 4.508 12 H 0.101 0.899 13 C -0.125 4.125 14 N -0.394 5.394 15 Si 0.717 3.283 16 H -0.184 1.184 17 H -0.200 1.200 18 H -0.196 1.196 19 H 0.114 0.886 20 H 0.135 0.865 21 H 0.117 0.883 22 H 0.118 0.882 23 H 0.119 0.881 24 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 0.317 -0.724 1.934 2.089 hybrid contribution 0.402 0.408 -0.951 1.110 sum 0.719 -0.316 0.983 1.258 Atomic orbital electron populations 1.81063 1.13441 1.10335 1.10392 1.29588 0.95519 0.91764 0.91696 1.17903 0.80680 1.00406 1.01380 1.19292 1.11772 0.94312 0.92940 1.20563 0.98419 0.92944 0.97808 1.20308 1.11940 0.98681 0.93382 1.20585 0.99759 0.96402 0.93900 1.20973 1.11283 0.95223 0.82744 1.98217 1.96209 1.98581 1.13744 1.17150 0.88039 0.91446 0.89963 1.19283 1.07223 1.09709 1.14603 0.89862 1.25582 0.94176 0.95955 0.96759 1.69781 1.03650 1.34761 1.31202 0.86481 0.80705 0.79651 0.81478 1.18412 1.20045 1.19618 0.88586 0.86457 0.88262 0.88163 0.88127 0.90728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -9.95 18.54 42.15 0.78 -9.16 14 2 C 0.23 4.39 15.09 -20.76 -0.31 4.08 14 3 C 0.04 0.61 5.30 -30.67 -0.16 0.45 14 4 C -0.18 -3.73 5.15 -103.92 -0.53 -4.26 14 5 C -0.08 -1.52 9.66 -39.66 -0.38 -1.90 14 6 C -0.22 -4.40 10.05 -39.30 -0.39 -4.79 14 7 C -0.09 -1.86 9.81 -39.63 -0.39 -2.25 14 8 C -0.07 -1.77 5.95 -38.76 -0.23 -2.00 14 9 Cl -0.10 -2.22 24.95 -51.86 -1.29 -3.51 14 10 C 0.14 3.27 5.26 -106.79 -0.56 2.71 14 11 C -0.48 -11.60 7.32 -37.77 -0.28 -11.87 14 12 H 0.08 2.02 7.49 -52.48 -0.39 1.62 14 13 C 0.10 2.28 3.73 -17.34 -0.06 2.22 14 14 N -0.77 -18.70 11.20 55.55 0.62 -18.08 14 15 Si 0.89 18.56 29.61 -169.99 -5.03 13.53 14 16 H -0.26 -5.49 7.11 56.52 0.40 -5.09 14 17 H -0.27 -5.54 7.11 56.52 0.40 -5.14 14 18 H -0.27 -5.70 7.11 56.52 0.40 -5.30 14 19 H 0.10 1.27 8.06 -51.92 -0.42 0.86 14 20 H 0.12 1.99 7.31 -51.93 -0.38 1.61 14 21 H 0.10 1.59 8.06 -52.48 -0.42 1.17 14 22 H 0.10 1.70 8.06 -52.49 -0.42 1.27 14 23 H 0.10 1.95 8.06 -52.49 -0.42 1.53 14 24 H 0.28 6.37 8.30 -40.82 -0.34 6.03 14 LS Contribution 238.26 15.07 3.59 3.59 Total: -1.00 -26.45 238.26 -6.24 -32.69 By element: Atomic # 1 Polarization: 0.17 SS G_CDS: -1.59 Total: -1.43 kcal Atomic # 6 Polarization: -14.31 SS G_CDS: -3.31 Total: -17.62 kcal Atomic # 7 Polarization: -28.65 SS G_CDS: 1.40 Total: -27.24 kcal Atomic # 14 Polarization: 18.56 SS G_CDS: -5.03 Total: 13.53 kcal Atomic # 17 Polarization: -2.22 SS G_CDS: -1.29 Total: -3.51 kcal Total LS contribution 3.59 Total: 3.59 kcal Total: -26.45 -6.24 -32.69 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000115771380.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.066 kcal (2) G-P(sol) polarization free energy of solvation -26.453 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.691 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds