Wall clock time and date at job start Mon Mar 30 2020 03:35:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.43207 * 179.97438 * 2 1 4 4 C 1.39657 * 120.14205 * 277.97031 * 3 2 1 5 5 C 1.37933 * 119.87335 * 180.02562 * 4 3 2 6 6 C 1.38361 * 120.16598 * 0.02801 * 5 4 3 7 7 C 1.38455 * 120.29130 * 359.97438 * 6 5 4 8 8 Cl 1.73597 * 119.93906 * 179.97438 * 7 6 5 9 9 C 1.38095 * 120.12757 * 359.97438 * 7 6 5 10 10 C 1.50699 * 120.08661 * 179.70208 * 9 7 6 11 11 C 1.50700 * 109.46877 * 89.99954 * 10 9 7 12 12 H 1.07999 * 120.00164 * 0.02562 * 11 10 9 13 13 C 1.37871 * 119.99760 * 179.97438 * 11 10 9 14 14 N 1.31512 * 120.00575 * 0.02562 * 13 11 10 15 15 Si 1.86807 * 120.00024 * 180.02562 * 13 11 10 16 16 H 1.48500 * 109.46893 * 0.02562 * 15 13 11 17 17 H 1.48506 * 109.47149 * 120.00011 * 15 13 11 18 18 H 1.48497 * 109.47359 * 239.99850 * 15 13 11 19 19 H 1.08001 * 120.06092 * 0.05145 * 4 3 2 20 20 H 1.07994 * 119.91916 * 180.02562 * 5 4 3 21 21 H 1.07996 * 119.85694 * 179.97438 * 6 5 4 22 22 H 1.09000 * 109.46994 * 210.00040 * 10 9 7 23 23 H 1.08997 * 109.46685 * 330.00177 * 10 9 7 24 24 H 0.97002 * 120.00592 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2694 -0.1665 1.1961 5 6 4.6487 -0.1645 1.1897 6 6 5.3383 0.0033 0.0020 7 6 4.6499 0.1696 -1.1877 8 17 5.5243 0.3800 -2.6725 9 6 3.2689 0.1685 -1.1955 10 6 2.5206 0.3563 -2.4900 11 6 2.2735 -0.9870 -3.1268 12 1 2.6230 -1.8868 -2.6423 13 6 1.6003 -1.0674 -4.3273 14 7 1.1742 0.0281 -4.9170 15 14 1.2934 -2.7326 -5.1163 16 1 1.8680 -3.8001 -4.2588 17 1 -0.1685 -2.9491 -5.2626 18 1 1.9359 -2.7723 -6.4545 19 1 2.7327 -0.2975 2.1241 20 1 5.1918 -0.2941 2.1141 21 1 6.4182 0.0045 0.0029 22 1 1.5668 0.8449 -2.2907 23 1 3.1119 0.9751 -3.1649 24 1 0.7009 -0.0284 -5.7618 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000306910557.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:35:25 Heat of formation + Delta-G solvation = 34.431528 kcal Electronic energy + Delta-G solvation = -12071.895741 eV Core-core repulsion = 9782.797009 eV Total energy + Delta-G solvation = -2289.098732 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 221.030 amu Computer time = 0.14 seconds Orbital eigenvalues (eV) -39.25307 -36.11964 -35.55374 -33.60819 -31.53537 -30.67836 -27.36092 -23.87217 -23.13358 -20.91155 -18.32762 -16.41951 -15.66261 -15.53857 -14.65420 -14.36892 -13.69813 -13.08036 -12.57980 -12.54928 -12.29619 -12.11165 -11.79314 -11.29731 -11.10683 -10.93613 -10.71012 -10.61837 -10.25329 -9.72316 -9.53518 -8.49351 -8.45162 -8.13727 -6.08202 -4.12192 1.08472 1.59262 2.65129 3.28962 3.33876 3.36113 3.37287 3.41184 4.24499 4.41659 4.45554 5.07407 5.23370 5.25569 5.35995 5.64067 5.83162 6.18098 6.39427 6.52877 6.59896 6.98773 7.39937 7.52126 7.85058 8.10640 8.18156 8.90173 9.51715 11.02192 Molecular weight = 221.03amu Principal moments of inertia in cm(-1) A = 0.024143 B = 0.011800 C = 0.008987 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1159.469047 B = 2372.298837 C = 3114.763781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.424 5.424 2 C 0.271 3.729 3 C -0.030 4.030 4 C -0.071 4.071 5 C -0.139 4.139 6 C -0.086 4.086 7 C -0.043 4.043 8 Cl -0.056 7.056 9 C 0.019 3.981 10 C 0.038 3.962 11 C -0.508 4.508 12 H 0.058 0.942 13 C 0.064 3.936 14 N -0.889 5.889 15 Si 0.894 3.106 16 H -0.271 1.271 17 H -0.284 1.284 18 H -0.282 1.282 19 H 0.129 0.871 20 H 0.132 0.868 21 H 0.131 0.869 22 H 0.032 0.968 23 H 0.050 0.950 24 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.383 0.459 9.738 13.531 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.099 5.099 2 C -0.044 4.044 3 C -0.033 4.033 4 C -0.092 4.092 5 C -0.157 4.157 6 C -0.106 4.106 7 C -0.070 4.070 8 Cl -0.027 7.027 9 C 0.016 3.984 10 C 0.001 3.999 11 C -0.546 4.546 12 H 0.077 0.923 13 C -0.138 4.138 14 N -0.527 5.527 15 Si 0.721 3.279 16 H -0.195 1.195 17 H -0.210 1.210 18 H -0.208 1.208 19 H 0.147 0.853 20 H 0.150 0.850 21 H 0.149 0.851 22 H 0.050 0.950 23 H 0.068 0.932 24 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 7.597 0.543 9.441 12.131 hybrid contribution 0.315 -0.906 -0.723 1.201 sum 7.912 -0.363 8.719 11.779 Atomic orbital electron populations 1.81118 1.12102 1.08702 1.08021 1.25303 0.92397 0.93651 0.93011 1.15830 0.84919 1.08657 0.93938 1.21135 0.94330 0.97248 0.96457 1.20775 0.93470 1.03784 0.97674 1.21192 1.00253 0.98130 0.90988 1.20632 0.91874 1.06619 0.87902 1.98359 1.75047 1.95439 1.33805 1.20717 0.91993 0.88916 0.96762 1.18605 0.95147 0.98941 0.87215 1.20852 1.36870 0.91245 1.05657 0.92328 1.24934 0.95332 0.96665 0.96900 1.69949 1.38108 1.27161 1.17488 0.86496 0.77988 0.84077 0.79323 1.19546 1.20960 1.20791 0.85259 0.84977 0.85086 0.94960 0.93207 0.92783 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -9.34 18.54 41.84 0.78 -8.56 14 2 C 0.27 5.51 13.80 -22.47 -0.31 5.20 14 3 C -0.03 -0.54 5.73 -106.93 -0.61 -1.15 14 4 C -0.07 -0.96 9.76 -39.16 -0.38 -1.34 14 5 C -0.14 -1.63 10.03 -39.65 -0.40 -2.03 14 6 C -0.09 -1.15 9.82 -39.46 -0.39 -1.54 14 7 C -0.04 -0.76 6.31 -39.55 -0.25 -1.01 14 8 Cl -0.06 -0.99 27.29 -51.86 -1.42 -2.41 14 9 C 0.02 0.39 5.11 -104.17 -0.53 -0.14 14 10 C 0.04 0.93 4.30 -29.04 -0.12 0.81 14 11 C -0.51 -13.85 9.09 -34.44 -0.31 -14.16 14 12 H 0.06 1.59 7.74 -52.49 -0.41 1.18 14 13 C 0.06 1.80 5.46 -17.82 -0.10 1.70 14 14 N -0.89 -26.17 13.29 55.43 0.74 -25.43 14 15 Si 0.89 21.73 29.54 -169.99 -5.02 16.71 14 16 H -0.27 -6.46 7.11 56.52 0.40 -6.06 14 17 H -0.28 -6.91 7.11 56.52 0.40 -6.51 14 18 H -0.28 -6.74 7.11 56.52 0.40 -6.33 14 19 H 0.13 1.38 8.06 -52.49 -0.42 0.96 14 20 H 0.13 1.08 8.06 -52.49 -0.42 0.66 14 21 H 0.13 1.39 8.06 -52.49 -0.42 0.97 14 22 H 0.03 0.88 7.08 -51.93 -0.37 0.51 14 23 H 0.05 1.29 6.91 -51.93 -0.36 0.93 14 24 H 0.26 7.32 8.31 -40.82 -0.34 6.98 14 LS Contribution 243.58 15.07 3.67 3.67 Total: -1.00 -30.21 243.58 -6.20 -36.40 By element: Atomic # 1 Polarization: -5.17 SS G_CDS: -1.54 Total: -6.71 kcal Atomic # 6 Polarization: -10.26 SS G_CDS: -3.41 Total: -13.67 kcal Atomic # 7 Polarization: -35.51 SS G_CDS: 1.51 Total: -34.00 kcal Atomic # 14 Polarization: 21.73 SS G_CDS: -5.02 Total: 16.71 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.42 Total: -2.41 kcal Total LS contribution 3.67 Total: 3.67 kcal Total: -30.21 -6.20 -36.40 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000306910557.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.835 kcal (2) G-P(sol) polarization free energy of solvation -30.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.404 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.14 seconds