Wall clock time and date at job start Mon Mar 30 2020 03:35:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39678 * 120.13287 * 152.18175 * 3 2 1 5 5 C 1.37872 * 119.85825 * 179.97438 * 4 3 2 6 6 C 1.38530 * 120.13753 * 359.97438 * 5 4 3 7 7 Cl 1.73608 * 119.86085 * 180.02562 * 6 5 4 8 8 C 1.38484 * 120.27769 * 359.76957 * 6 5 4 9 9 C 1.37917 * 120.13525 * 0.50513 * 8 6 5 10 10 C 1.50698 * 120.06567 * 179.74455 * 9 8 6 11 11 C 1.50706 * 109.47294 * 264.72703 * 10 9 8 12 12 H 1.07999 * 119.99515 * 0.02562 * 11 10 9 13 13 C 1.37870 * 120.00176 * 180.02562 * 11 10 9 14 14 N 1.31520 * 119.99883 * 0.02562 * 13 11 10 15 15 Si 1.86800 * 120.00043 * 180.02562 * 13 11 10 16 16 H 1.48495 * 109.47216 * 359.97438 * 15 13 11 17 17 H 1.48500 * 109.47389 * 119.99848 * 15 13 11 18 18 H 1.48501 * 109.47057 * 239.99829 * 15 13 11 19 19 H 1.08001 * 120.07596 * 0.02562 * 4 3 2 20 20 H 1.08001 * 119.93311 * 180.02562 * 5 4 3 21 21 H 1.08002 * 119.93026 * 180.25641 * 8 6 5 22 22 H 1.09001 * 109.46665 * 144.73084 * 10 9 8 23 23 H 1.09000 * 109.47722 * 24.73416 * 10 9 8 24 24 H 0.97004 * 119.99507 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2687 1.0694 -0.5637 5 6 4.6474 1.0644 -0.5602 6 6 5.3377 0.0027 0.0014 7 17 7.0738 0.0041 0.0026 8 6 4.6487 -1.0573 0.5666 9 6 3.2696 -1.0668 0.5642 10 6 2.5214 -2.2238 1.1746 11 6 2.1653 -3.2160 0.0976 12 1 2.4525 -3.0277 -0.9264 13 6 1.4730 -4.3640 0.4195 14 7 1.1229 -4.5930 1.6663 15 14 1.0323 -5.5942 -0.9154 16 1 1.5361 -5.1062 -2.2242 17 1 1.6533 -6.9066 -0.6037 18 1 -0.4433 -5.7477 -0.9795 19 1 2.7318 1.8983 -1.0008 20 1 5.1905 1.8903 -0.9954 21 1 5.1925 -1.8802 1.0066 22 1 1.6099 -1.8581 1.6474 23 1 3.1491 -2.7087 1.9222 24 1 0.6361 -5.4009 1.8928 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000306913425.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:35:28 Heat of formation + Delta-G solvation = 30.609489 kcal Electronic energy + Delta-G solvation = -11879.089187 eV Core-core repulsion = 9589.824718 eV Total energy + Delta-G solvation = -2289.264469 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 221.030 amu Computer time = 0.15 seconds Orbital eigenvalues (eV) -39.28934 -36.53634 -35.59835 -33.63958 -31.56438 -30.74786 -27.47038 -23.82565 -23.19416 -21.01224 -18.28023 -16.49082 -16.03717 -15.54678 -14.61796 -14.09955 -13.71705 -13.13212 -12.69831 -12.68942 -12.35623 -12.32253 -11.74883 -11.45413 -11.15312 -11.06621 -10.87364 -10.66449 -10.58282 -9.79914 -9.62845 -8.57113 -8.53428 -8.22574 -6.15741 -4.20980 1.00501 1.61263 2.24980 3.25003 3.30444 3.33007 3.34670 3.38087 4.23938 4.38819 4.46396 5.03433 5.11737 5.21047 5.47988 5.68690 5.87241 6.20943 6.32237 6.48061 6.63343 6.99717 7.32493 7.45848 7.78300 8.09663 8.13242 8.82918 9.44373 10.94333 Molecular weight = 221.03amu Principal moments of inertia in cm(-1) A = 0.027329 B = 0.008787 C = 0.007311 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1024.301456 B = 3185.713589 C = 3828.799551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.424 5.424 2 C 0.271 3.729 3 C -0.034 4.034 4 C -0.062 4.062 5 C -0.141 4.141 6 C -0.007 4.007 7 Cl -0.079 7.079 8 C -0.117 4.117 9 C 0.026 3.974 10 C 0.041 3.959 11 C -0.518 4.518 12 H 0.060 0.940 13 C 0.063 3.937 14 N -0.888 5.888 15 Si 0.896 3.104 16 H -0.271 1.271 17 H -0.281 1.281 18 H -0.283 1.283 19 H 0.134 0.866 20 H 0.134 0.866 21 H 0.141 0.859 22 H 0.035 0.965 23 H 0.040 0.960 24 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.411 9.573 -3.030 13.762 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.100 5.100 2 C -0.045 4.045 3 C -0.038 4.038 4 C -0.083 4.083 5 C -0.160 4.160 6 C -0.035 4.035 7 Cl -0.050 7.050 8 C -0.135 4.135 9 C 0.023 3.977 10 C 0.004 3.996 11 C -0.556 4.556 12 H 0.079 0.921 13 C -0.140 4.140 14 N -0.526 5.526 15 Si 0.723 3.277 16 H -0.195 1.195 17 H -0.207 1.207 18 H -0.209 1.209 19 H 0.152 0.848 20 H 0.152 0.848 21 H 0.158 0.842 22 H 0.053 0.947 23 H 0.059 0.941 24 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 7.707 9.445 -2.914 12.534 hybrid contribution 0.342 -0.833 -0.674 1.125 sum 8.049 8.612 -3.588 12.322 Atomic orbital electron populations 1.81114 1.12159 1.08395 1.08284 1.25333 0.92445 0.92965 0.93714 1.16063 0.85032 0.97226 1.05449 1.20985 0.93281 0.96919 0.97087 1.20701 0.93548 0.98571 1.03177 1.21172 0.83894 0.97069 1.01318 1.98352 1.10839 1.98520 1.97303 1.20970 0.93515 0.97802 1.01236 1.20804 0.92707 0.93711 0.90454 1.18536 0.95235 0.89305 0.96501 1.20952 1.36806 1.04034 0.93759 0.92145 1.24981 0.95362 0.98029 0.95610 1.69953 1.38766 1.26717 1.17186 0.86456 0.78304 0.80957 0.81942 1.19514 1.20719 1.20856 0.84827 0.84808 0.84152 0.94666 0.94140 0.92665 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -9.29 18.54 41.84 0.78 -8.51 14 2 C 0.27 5.43 13.89 -22.47 -0.31 5.12 14 3 C -0.03 -0.61 5.73 -106.91 -0.61 -1.22 14 4 C -0.06 -0.84 9.75 -39.18 -0.38 -1.22 14 5 C -0.14 -1.78 9.81 -39.61 -0.39 -2.17 14 6 C -0.01 -0.10 6.33 -39.38 -0.25 -0.35 14 7 Cl -0.08 -0.99 28.95 -51.86 -1.50 -2.49 14 8 C -0.12 -1.94 9.44 -39.61 -0.37 -2.31 14 9 C 0.03 0.51 5.10 -104.22 -0.53 -0.03 14 10 C 0.04 0.99 4.62 -29.03 -0.13 0.85 14 11 C -0.52 -13.86 9.09 -34.44 -0.31 -14.18 14 12 H 0.06 1.60 7.74 -52.49 -0.41 1.20 14 13 C 0.06 1.74 5.46 -17.82 -0.10 1.64 14 14 N -0.89 -25.72 13.29 55.43 0.74 -24.98 14 15 Si 0.90 21.39 29.54 -169.99 -5.02 16.37 14 16 H -0.27 -6.35 7.11 56.52 0.40 -5.94 14 17 H -0.28 -6.57 7.11 56.52 0.40 -6.17 14 18 H -0.28 -6.79 7.11 56.52 0.40 -6.39 14 19 H 0.13 1.43 8.06 -52.49 -0.42 1.01 14 20 H 0.13 1.30 8.06 -52.49 -0.42 0.88 14 21 H 0.14 2.26 8.06 -52.49 -0.42 1.84 14 22 H 0.04 0.93 7.28 -51.93 -0.38 0.55 14 23 H 0.04 1.00 8.05 -51.93 -0.42 0.58 14 24 H 0.26 7.23 8.31 -40.82 -0.34 6.89 14 LS Contribution 246.41 15.07 3.71 3.71 Total: -1.00 -29.04 246.41 -6.30 -35.34 By element: Atomic # 1 Polarization: -3.96 SS G_CDS: -1.61 Total: -5.56 kcal Atomic # 6 Polarization: -10.47 SS G_CDS: -3.40 Total: -13.87 kcal Atomic # 7 Polarization: -35.01 SS G_CDS: 1.51 Total: -33.50 kcal Atomic # 14 Polarization: 21.39 SS G_CDS: -5.02 Total: 16.37 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -1.50 Total: -2.49 kcal Total LS contribution 3.71 Total: 3.71 kcal Total: -29.04 -6.30 -35.34 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000306913425.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.945 kcal (2) G-P(sol) polarization free energy of solvation -29.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.297 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.335 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.15 seconds