Wall clock time and date at job start Mon Mar 30 2020 03:35:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39679 * 120.13849 * 128.24705 * 3 2 1 5 5 C 1.37870 * 119.86427 * 180.02562 * 4 3 2 6 6 C 1.38529 * 120.13557 * 359.97438 * 5 4 3 7 7 Cl 1.73602 * 119.86123 * 179.97438 * 6 5 4 8 8 C 1.38482 * 120.27837 * 0.02562 * 6 5 4 9 9 C 1.50703 * 119.93057 * 179.97438 * 8 6 5 10 10 C 1.50701 * 109.47064 * 279.99652 * 9 8 6 11 11 H 1.07998 * 120.00129 * 0.02562 * 10 9 8 12 12 C 1.37880 * 119.99861 * 179.97438 * 10 9 8 13 13 N 1.31510 * 119.99913 * 0.02562 * 12 10 9 14 14 Si 1.86797 * 119.99734 * 180.02562 * 12 10 9 15 15 H 1.48499 * 109.47094 * 90.00289 * 14 12 10 16 16 H 1.48505 * 109.47195 * 210.00171 * 14 12 10 17 17 H 1.48493 * 109.47449 * 330.00136 * 14 12 10 18 18 C 1.37912 * 120.13509 * 0.24863 * 8 6 5 19 19 H 1.08003 * 120.06812 * 359.97438 * 4 3 2 20 20 H 1.08005 * 119.93261 * 179.97438 * 5 4 3 21 21 H 1.09002 * 109.47152 * 159.99745 * 9 8 6 22 22 H 1.09001 * 109.46980 * 39.99845 * 9 8 6 23 23 H 0.97002 * 119.99768 * 179.97438 * 13 12 10 24 24 H 1.08008 * 120.06936 * 179.72243 * 18 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2690 0.7488 -0.9487 5 6 4.6476 0.7449 -0.9438 6 6 5.3377 0.0015 -0.0003 7 17 7.0737 0.0012 -0.0012 8 6 4.6486 -0.7423 0.9429 9 6 5.4072 -1.5487 1.9653 10 6 5.8731 -2.8393 1.3422 11 1 5.6433 -3.0540 0.3090 12 6 6.5938 -3.7456 2.0908 13 7 6.8740 -3.4839 3.3487 14 14 7.1719 -5.3450 1.3181 15 1 8.5162 -5.1477 0.7189 16 1 7.2446 -6.4003 2.3604 17 1 6.2145 -5.7585 0.2610 18 6 3.2695 -0.7511 0.9449 19 1 2.7321 1.3284 -1.6850 20 1 5.1908 1.3226 -1.6771 21 1 4.7557 -1.7681 2.8112 22 1 6.2704 -0.9790 2.3096 23 1 7.3807 -4.1217 3.8755 24 1 2.7331 -1.3351 1.6782 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000307035882.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:35:48 Heat of formation + Delta-G solvation = 32.565361 kcal Electronic energy + Delta-G solvation = -11832.506688 eV Core-core repulsion = 9543.327032 eV Total energy + Delta-G solvation = -2289.179656 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 221.030 amu Computer time = 0.15 seconds Orbital eigenvalues (eV) -39.25283 -36.49747 -35.68194 -33.62877 -31.54244 -30.80286 -27.29541 -23.70819 -23.30127 -21.28949 -17.89481 -16.40755 -16.31573 -15.54651 -14.63643 -14.02397 -13.91348 -13.14885 -12.89500 -12.84631 -12.74258 -12.08936 -11.75277 -11.42069 -11.12147 -10.90994 -10.73339 -10.61174 -10.27101 -9.70841 -9.55321 -8.57658 -8.46146 -8.11978 -6.09176 -4.12348 0.93105 1.61598 2.68713 2.78875 3.10947 3.28739 3.35513 3.38954 4.04776 4.08374 4.42076 5.06741 5.07590 5.27437 5.49014 5.68269 5.90080 6.17672 6.30933 6.53575 6.61653 7.01871 7.42937 7.53982 7.61524 7.85219 8.20007 8.90344 9.51389 11.01135 Molecular weight = 221.03amu Principal moments of inertia in cm(-1) A = 0.027446 B = 0.009143 C = 0.007575 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1019.949433 B = 3061.794052 C = 3695.689276 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.268 3.732 3 C -0.038 4.038 4 C -0.087 4.087 5 C -0.118 4.118 6 C -0.008 4.008 7 Cl -0.052 7.052 8 C -0.030 4.030 9 C 0.045 3.955 10 C -0.507 4.507 11 H 0.058 0.942 12 C 0.062 3.938 13 N -0.892 5.892 14 Si 0.893 3.107 15 H -0.279 1.279 16 H -0.286 1.286 17 H -0.273 1.273 18 C -0.064 4.064 19 H 0.131 0.869 20 H 0.135 0.865 21 H 0.033 0.967 22 H 0.044 0.956 23 H 0.262 0.738 24 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.961 7.608 -6.619 10.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.047 4.047 3 C -0.042 4.042 4 C -0.107 4.107 5 C -0.137 4.137 6 C -0.036 4.036 7 Cl -0.023 7.023 8 C -0.031 4.031 9 C 0.009 3.991 10 C -0.545 4.545 11 H 0.076 0.924 12 C -0.140 4.140 13 N -0.531 5.531 14 Si 0.720 3.280 15 H -0.205 1.205 16 H -0.212 1.212 17 H -0.198 1.198 18 C -0.084 4.084 19 H 0.149 0.851 20 H 0.153 0.847 21 H 0.051 0.949 22 H 0.063 0.937 23 H 0.072 0.928 24 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -3.480 7.530 -6.458 10.513 hybrid contribution 0.964 -0.959 -0.387 1.414 sum -2.515 6.571 -6.845 9.816 Atomic orbital electron populations 1.81196 1.12162 1.09096 1.08639 1.25766 0.92682 0.93108 0.93163 1.16073 0.84073 1.03552 1.00468 1.20826 0.93351 0.98816 0.97736 1.20881 0.93553 1.00301 0.98917 1.21142 0.85755 0.99190 0.97510 1.98371 1.08819 1.97322 1.97758 1.20600 0.92909 0.93339 0.96229 1.18487 0.95258 0.93835 0.91568 1.20891 1.34628 1.01375 0.97602 0.92410 1.24934 0.95862 0.98351 0.94807 1.69939 1.39525 1.36268 1.07319 0.86571 0.79274 0.83111 0.79000 1.20536 1.21209 1.19795 1.21131 0.93383 0.96704 0.97215 0.85094 0.84735 0.94853 0.93745 0.92790 0.84494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -7.16 18.54 41.84 0.78 -6.39 14 2 C 0.27 4.00 15.33 -22.47 -0.34 3.65 14 3 C -0.04 -0.55 5.73 -106.91 -0.61 -1.16 14 4 C -0.09 -1.09 9.75 -39.18 -0.38 -1.47 14 5 C -0.12 -1.58 9.81 -39.61 -0.39 -1.97 14 6 C -0.01 -0.14 6.31 -39.38 -0.25 -0.39 14 7 Cl -0.05 -0.92 27.29 -51.86 -1.42 -2.34 14 8 C -0.03 -0.57 5.07 -104.65 -0.53 -1.10 14 9 C 0.05 1.05 4.56 -29.03 -0.13 0.92 14 10 C -0.51 -13.09 8.85 -34.44 -0.30 -13.40 14 11 H 0.06 1.49 7.74 -52.49 -0.41 1.08 14 12 C 0.06 1.67 5.46 -17.82 -0.10 1.57 14 13 N -0.89 -25.12 13.29 55.43 0.74 -24.38 14 14 Si 0.89 20.81 29.54 -169.99 -5.02 15.79 14 15 H -0.28 -6.47 7.11 56.52 0.40 -6.07 14 16 H -0.29 -6.65 7.11 56.52 0.40 -6.25 14 17 H -0.27 -6.28 7.11 56.52 0.40 -5.88 14 18 C -0.06 -1.05 9.37 -39.18 -0.37 -1.42 14 19 H 0.13 1.26 8.06 -52.48 -0.42 0.84 14 20 H 0.13 1.45 8.06 -52.48 -0.42 1.03 14 21 H 0.03 0.81 8.00 -51.93 -0.42 0.40 14 22 H 0.04 1.10 7.34 -51.93 -0.38 0.72 14 23 H 0.26 7.04 8.31 -40.82 -0.34 6.70 14 24 H 0.14 2.18 8.04 -52.48 -0.42 1.76 14 LS Contribution 245.77 15.07 3.70 3.70 Total: -1.00 -27.80 245.77 -6.23 -34.03 By element: Atomic # 1 Polarization: -4.06 SS G_CDS: -1.60 Total: -5.66 kcal Atomic # 6 Polarization: -11.35 SS G_CDS: -3.41 Total: -14.76 kcal Atomic # 7 Polarization: -32.28 SS G_CDS: 1.51 Total: -30.77 kcal Atomic # 14 Polarization: 20.81 SS G_CDS: -5.02 Total: 15.79 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.42 Total: -2.34 kcal Total LS contribution 3.70 Total: 3.70 kcal Total: -27.80 -6.23 -34.03 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000307035882.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.599 kcal (2) G-P(sol) polarization free energy of solvation -27.799 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.034 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.565 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.15 seconds