Wall clock time and date at job start Mon Mar 30 2020 02:31:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.33336 * 126.45437 * 2 1 4 4 C 1.30801 * 109.24994 * 179.97438 * 3 2 1 5 5 C 1.50701 * 125.15064 * 179.97438 * 4 3 2 6 6 F 1.39907 * 109.47200 * 5.02448 * 5 4 3 7 7 F 1.39907 * 109.46995 * 125.02104 * 5 4 3 8 8 F 1.39892 * 109.47359 * 245.02598 * 5 4 3 9 9 O 1.34010 * 109.69510 * 359.74786 * 4 3 2 10 10 C 1.35478 * 107.71406 * 0.40333 * 9 4 3 11 11 C 1.39857 * 126.87043 * 179.87319 * 10 9 4 12 12 H 1.08001 * 119.99596 * 185.84097 * 11 10 9 13 13 C 1.40164 * 119.99967 * 5.84202 * 11 10 9 14 14 N 1.30801 * 119.99618 * 183.67808 * 13 11 10 15 15 Si 1.86797 * 120.00186 * 3.67502 * 13 11 10 16 16 H 1.48502 * 109.47113 * 180.02562 * 15 13 11 17 17 H 1.48502 * 109.47175 * 300.00191 * 15 13 11 18 18 H 1.48500 * 109.46918 * 60.00002 * 15 13 11 19 19 H 1.09008 * 109.47091 * 269.99849 * 1 2 3 20 20 H 1.08996 * 109.47575 * 30.00294 * 1 2 3 21 21 H 1.09001 * 109.46736 * 150.00648 * 1 2 3 22 22 H 0.96996 * 120.00245 * 354.79439 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2992 1.0725 0.0000 4 6 3.5487 0.6856 0.0006 5 6 4.7420 1.6060 0.0002 6 9 4.3087 2.9314 0.1147 7 9 5.5733 1.2922 1.0808 8 9 5.4516 1.4491 -1.1951 9 8 3.6070 -0.6532 0.0065 10 6 2.3356 -1.1212 0.0007 11 6 1.9345 -2.4610 0.0013 12 1 0.8888 -2.7116 -0.0989 13 6 2.8897 -3.4784 0.1321 14 7 2.5237 -4.7321 0.0606 15 14 4.6853 -3.0439 0.4084 16 1 5.4859 -4.2903 0.5123 17 1 5.1795 -2.2323 -0.7328 18 1 4.8180 -2.2635 1.6649 19 1 -0.3634 0.0000 1.0277 20 1 -0.3634 0.8899 -0.5138 21 1 -0.3633 -0.8901 -0.5137 22 1 1.5832 -4.9597 -0.0071 RHF calculation, no. of doubly occupied orbitals= 39 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000214584871.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:31:48 Heat of formation + Delta-G solvation = -179.638796 kcal Electronic energy + Delta-G solvation = -15240.570704 eV Core-core repulsion = 11959.623281 eV Total energy + Delta-G solvation = -3280.947423 eV No. of doubly occupied orbitals = 39 Molecular weight (most abundant/longest-lived isotopes) = 221.040 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -51.26048 -48.78327 -48.77555 -43.59401 -36.28613 -35.80925 -33.00050 -29.61537 -28.92487 -25.00973 -23.11351 -21.89610 -20.61706 -19.71793 -19.51439 -19.33084 -17.24695 -17.04809 -16.02870 -15.63839 -15.60531 -15.22560 -15.21049 -15.01914 -14.93482 -14.92396 -13.99796 -13.89229 -13.47889 -13.18953 -12.93185 -12.18084 -11.90952 -11.81253 -11.60344 -11.30136 -9.97383 -9.70603 -7.01710 0.43429 0.98317 1.34877 1.36320 1.60676 1.77074 1.98768 2.21113 2.66020 2.73004 3.28812 3.39556 4.19827 4.34851 4.75965 4.90750 5.06081 5.07993 5.16384 5.52170 5.77716 5.87233 6.09824 6.99580 7.61720 Molecular weight = 221.04amu Principal moments of inertia in cm(-1) A = 0.030338 B = 0.013695 C = 0.010067 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 922.712442 B = 2044.045344 C = 2780.723550 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.027 4.027 2 C -0.191 4.191 3 N -0.389 5.389 4 C -0.117 4.117 5 C 0.603 3.397 6 F -0.152 7.152 7 F -0.171 7.171 8 F -0.170 7.170 9 O -0.229 6.229 10 C 0.151 3.849 11 C -0.456 4.456 12 H 0.118 0.882 13 C 0.024 3.976 14 N -0.780 5.780 15 Si 1.078 2.922 16 H -0.251 1.251 17 H -0.265 1.265 18 H -0.269 1.269 19 H 0.061 0.939 20 H 0.067 0.933 21 H 0.067 0.933 22 H 0.299 0.701 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.180 4.568 0.302 5.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 C -0.323 4.323 3 N -0.117 5.117 4 C -0.310 4.310 5 C 0.547 3.453 6 F -0.133 7.133 7 F -0.152 7.152 8 F -0.152 7.152 9 O -0.124 6.124 10 C 0.097 3.903 11 C -0.484 4.484 12 H 0.136 0.864 13 C -0.199 4.199 14 N -0.402 5.402 15 Si 0.900 3.100 16 H -0.176 1.176 17 H -0.191 1.191 18 H -0.195 1.195 19 H 0.080 0.920 20 H 0.086 0.914 21 H 0.086 0.914 22 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 3.583 4.537 0.440 5.798 hybrid contribution -1.373 -0.065 -0.208 1.391 sum 2.209 4.472 0.232 4.994 Atomic orbital electron populations 1.19626 0.85165 1.02022 1.01587 1.22138 0.98019 0.86035 1.26143 1.69145 0.99833 1.33647 1.09117 1.24122 0.93882 0.81127 1.31878 1.15677 0.78413 0.77206 0.74003 1.93197 1.89779 1.34565 1.95764 1.93210 1.73411 1.92862 1.55739 1.93213 1.79703 1.95492 1.46743 1.84233 1.30621 1.20985 1.76514 1.21048 0.79675 0.96033 0.93558 1.20223 0.98616 0.87039 1.42512 0.86434 1.28075 1.09907 0.92012 0.89926 1.70562 1.22890 1.18749 1.28010 0.83318 0.70283 0.76648 0.79776 1.17601 1.19105 1.19468 0.92010 0.91426 0.91421 0.88858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.03 -1.00 10.24 71.23 0.73 -0.27 14 2 C -0.19 -9.07 7.27 42.61 0.31 -8.76 14 3 N -0.39 -19.00 10.97 -288.42 -3.16 -22.16 14 4 C -0.12 -5.65 7.60 88.26 0.67 -4.98 14 5 C 0.60 24.33 3.57 71.24 0.25 24.59 14 6 F -0.15 -5.72 17.11 44.97 0.77 -4.95 14 7 F -0.17 -6.55 17.30 44.97 0.78 -5.78 14 8 F -0.17 -6.52 17.30 44.97 0.78 -5.75 14 9 O -0.23 -11.67 6.31 -11.73 -0.07 -11.74 14 10 C 0.15 7.59 6.53 22.95 0.15 7.74 14 11 C -0.46 -22.19 9.54 23.13 0.22 -21.97 14 12 H 0.12 5.49 7.51 -2.91 -0.02 5.47 14 13 C 0.02 1.16 5.52 85.31 0.47 1.63 14 14 N -0.78 -36.61 13.65 21.87 0.30 -36.31 14 15 Si 1.08 46.41 25.97 68.60 1.78 48.19 14 16 H -0.25 -9.83 7.11 99.48 0.71 -9.12 14 17 H -0.27 -11.70 6.82 99.48 0.68 -11.03 14 18 H -0.27 -11.77 7.11 99.48 0.71 -11.06 14 19 H 0.06 2.13 8.14 -2.38 -0.02 2.11 14 20 H 0.07 2.30 8.14 -2.39 -0.02 2.28 14 21 H 0.07 2.37 7.56 -2.39 -0.02 2.35 14 22 H 0.30 13.24 8.72 -92.71 -0.81 12.44 14 Total: -1.00 -52.24 219.99 5.18 -47.06 By element: Atomic # 1 Polarization: -7.76 SS G_CDS: 1.20 Total: -6.56 kcal Atomic # 6 Polarization: -4.82 SS G_CDS: 2.81 Total: -2.01 kcal Atomic # 7 Polarization: -55.61 SS G_CDS: -2.86 Total: -58.47 kcal Atomic # 8 Polarization: -11.67 SS G_CDS: -0.07 Total: -11.74 kcal Atomic # 9 Polarization: -18.79 SS G_CDS: 2.33 Total: -16.47 kcal Atomic # 14 Polarization: 46.41 SS G_CDS: 1.78 Total: 48.19 kcal Total: -52.24 5.18 -47.06 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000214584871.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.574 kcal (2) G-P(sol) polarization free energy of solvation -52.244 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -184.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.180 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.065 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds