Wall clock time and date at job start Mon Mar 30 2020 02:42:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.34705 * 126.08722 * 2 1 4 4 O 1.34647 * 107.24010 * 180.02562 * 3 2 1 5 5 C 1.34424 * 107.68400 * 0.02562 * 4 3 2 6 6 C 1.48023 * 125.70911 * 179.97438 * 5 4 3 7 7 N 1.31393 * 126.22791 * 180.02562 * 6 5 4 8 8 O 1.21264 * 110.50486 * 179.97438 * 7 6 5 9 9 C 1.34754 * 109.79412 * 0.02562 * 8 7 6 10 10 C 1.40382 * 126.66244 * 180.02562 * 9 8 7 11 11 H 1.08000 * 119.99963 * 179.97438 * 10 9 8 12 12 C 1.40421 * 120.00085 * 359.96864 * 10 9 8 13 13 N 1.30528 * 120.00123 * 0.02562 * 12 10 9 14 14 Si 1.86801 * 120.00152 * 180.02562 * 12 10 9 15 15 H 1.48502 * 109.47087 * 59.99695 * 14 12 10 16 16 H 1.48503 * 109.47323 * 180.02562 * 14 12 10 17 17 H 1.48500 * 109.46896 * 300.00312 * 14 12 10 18 18 N 1.33146 * 106.67374 * 359.75421 * 9 8 7 19 19 N 1.31133 * 108.58015 * 359.97438 * 5 4 3 20 20 H 1.09002 * 109.47114 * 269.95293 * 1 2 3 21 21 H 1.09000 * 109.47065 * 29.95127 * 1 2 3 22 22 H 1.09004 * 109.47471 * 149.94898 * 1 2 3 23 23 H 1.07997 * 126.38021 * 0.02562 * 3 2 1 24 24 H 0.97004 * 120.00002 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3004 1.0886 0.0000 4 8 3.5747 0.6536 -0.0006 5 6 3.5474 -0.6904 -0.0015 6 6 4.7316 -1.5785 -0.0029 7 7 4.7168 -2.8924 -0.0043 8 8 5.8477 -3.3299 -0.0057 9 6 6.7308 -2.3120 -0.0048 10 6 8.1307 -2.4168 -0.0064 11 1 8.7390 -1.5244 -0.0059 12 6 8.7401 -3.6819 -0.0086 13 7 8.0049 -4.7605 -0.0096 14 14 10.6029 -3.8214 -0.0100 15 1 11.1496 -3.1619 1.2030 16 1 10.9920 -5.2545 -0.0129 17 1 11.1479 -3.1584 -1.2219 18 7 6.0177 -1.1876 -0.0081 19 7 2.2962 -1.0829 -0.0009 20 1 -0.3633 -0.0008 1.0277 21 1 -0.3633 0.8904 -0.5131 22 1 -0.3634 -0.8895 -0.5146 23 1 1.9751 2.1184 0.0004 24 1 8.4259 -5.6344 -0.0108 RHF calculation, no. of doubly occupied orbitals= 39 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259629419.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:42:07 Heat of formation + Delta-G solvation = 71.846621 kcal Electronic energy + Delta-G solvation = -14036.893455 eV Core-core repulsion = 11341.000749 eV Total energy + Delta-G solvation = -2695.892706 eV No. of doubly occupied orbitals = 39 Molecular weight (most abundant/longest-lived isotopes) = 221.059 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -43.32050 -42.90735 -34.90495 -34.27059 -33.98988 -31.65448 -30.22359 -27.25520 -26.66875 -23.94978 -22.01239 -20.75636 -20.62765 -18.32718 -16.62015 -16.53821 -15.81470 -15.57574 -15.25884 -14.23016 -14.10003 -13.39509 -13.22367 -12.81590 -12.05492 -11.79730 -11.74790 -11.52063 -10.97990 -10.63062 -10.36944 -10.24986 -10.20809 -9.91668 -9.22387 -8.85943 -8.06520 -7.19903 -5.18273 1.48354 2.60835 2.78267 2.89423 2.91795 2.96179 3.31180 3.66439 3.96158 4.06862 4.87836 4.94785 5.01012 5.11174 5.53565 5.61407 5.73981 5.92328 6.07552 6.27486 6.47353 6.73830 6.92723 7.66013 7.89554 8.00093 8.15417 8.29339 9.78386 10.05816 Molecular weight = 221.06amu Principal moments of inertia in cm(-1) A = 0.090478 B = 0.006147 C = 0.005774 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 309.394731 B = 4554.084798 C = 4848.335160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 C -0.018 4.018 3 C -0.087 4.087 4 O -0.180 6.180 5 C 0.311 3.689 6 C 0.222 3.778 7 N -0.405 5.405 8 O 0.066 5.934 9 C 0.304 3.696 10 C -0.407 4.407 11 H 0.118 0.882 12 C 0.069 3.931 13 N -0.759 5.759 14 Si 0.941 3.059 15 H -0.258 1.258 16 H -0.273 1.273 17 H -0.258 1.258 18 N -0.594 5.594 19 N -0.458 5.458 20 H 0.073 0.927 21 H 0.073 0.927 22 H 0.075 0.925 23 H 0.216 0.784 24 H 0.296 0.704 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.698 5.707 0.015 7.392 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.140 4.140 3 C -0.159 4.159 4 O -0.063 6.063 5 C 0.105 3.895 6 C -0.049 4.049 7 N -0.132 5.132 8 O 0.011 5.989 9 C 0.115 3.885 10 C -0.445 4.445 11 H 0.135 0.865 12 C -0.157 4.157 13 N -0.385 5.385 14 Si 0.763 3.237 15 H -0.182 1.182 16 H -0.197 1.197 17 H -0.182 1.182 18 N -0.340 5.340 19 N -0.191 5.191 20 H 0.092 0.908 21 H 0.092 0.908 22 H 0.094 0.906 23 H 0.232 0.768 24 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -5.595 4.871 0.007 7.418 hybrid contribution 1.059 0.614 0.010 1.224 sum -4.536 5.485 0.018 7.117 Atomic orbital electron populations 1.20065 0.86466 1.03178 1.02726 1.21872 0.98197 0.88229 1.05727 1.24864 0.80341 1.00886 1.09813 1.84560 1.29918 1.23024 1.68818 1.21588 0.90252 0.77783 0.99860 1.20996 0.88760 0.87980 1.07153 1.74833 1.03049 1.09733 1.25604 1.85603 1.09071 1.34055 1.70202 1.24130 0.94358 0.78821 0.91155 1.18620 0.85436 0.94985 1.45430 0.86467 1.26239 1.03104 0.94561 0.91759 1.69617 1.39408 0.99815 1.29691 0.85810 0.78845 0.78509 0.80543 1.18224 1.19718 1.18230 1.72512 0.98424 1.26406 1.36630 1.70555 0.99503 1.30568 1.18446 0.90830 0.90848 0.90594 0.76759 0.89248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.77 10.43 36.01 0.38 -0.39 14 2 C -0.02 -0.31 7.10 -82.90 -0.59 -0.89 14 3 C -0.09 -1.34 12.09 29.48 0.36 -0.99 14 4 O -0.18 -3.74 10.79 4.43 0.05 -3.69 14 5 C 0.31 7.42 8.25 -13.84 -0.11 7.30 14 6 C 0.22 6.06 8.11 -156.49 -1.27 4.79 14 7 N -0.41 -11.51 12.20 31.45 0.38 -11.13 14 8 O 0.07 1.91 9.71 15.13 0.15 2.06 14 9 C 0.30 8.58 7.80 -16.33 -0.13 8.45 14 10 C -0.41 -10.41 9.48 -37.95 -0.36 -10.77 14 11 H 0.12 2.79 7.85 -52.49 -0.41 2.38 14 12 C 0.07 1.61 5.50 -17.28 -0.10 1.52 14 13 N -0.76 -18.64 12.05 55.57 0.67 -17.97 14 14 Si 0.94 16.87 29.56 -169.99 -5.03 11.84 14 15 H -0.26 -4.54 7.11 56.52 0.40 -4.14 14 16 H -0.27 -4.71 7.11 56.52 0.40 -4.31 14 17 H -0.26 -4.55 7.11 56.52 0.40 -4.15 14 18 N -0.59 -16.73 11.64 -11.67 -0.14 -16.86 14 19 N -0.46 -10.07 11.31 -7.93 -0.09 -10.16 14 20 H 0.07 0.74 8.14 -51.93 -0.42 0.32 14 21 H 0.07 0.61 8.14 -51.93 -0.42 0.18 14 22 H 0.08 0.89 8.14 -51.93 -0.42 0.47 14 23 H 0.22 2.08 8.06 -52.49 -0.42 1.66 14 24 H 0.30 6.42 8.29 -40.82 -0.34 6.08 14 LS Contribution 235.97 15.07 3.56 3.56 Total: -1.00 -31.35 235.97 -3.51 -34.86 By element: Atomic # 1 Polarization: -0.27 SS G_CDS: -1.24 Total: -1.51 kcal Atomic # 6 Polarization: 10.84 SS G_CDS: -1.82 Total: 9.01 kcal Atomic # 7 Polarization: -56.95 SS G_CDS: 0.83 Total: -56.13 kcal Atomic # 8 Polarization: -1.83 SS G_CDS: 0.19 Total: -1.63 kcal Atomic # 14 Polarization: 16.87 SS G_CDS: -5.03 Total: 11.84 kcal Total LS contribution 3.56 Total: 3.56 kcal Total: -31.35 -3.51 -34.86 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259629419.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.703 kcal (2) G-P(sol) polarization free energy of solvation -31.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.505 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.856 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds