Wall clock time and date at job start Mon Mar 30 2020 02:42:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 O 1.34544 * 126.50603 * 2 1 4 4 C 1.33989 * 108.10927 * 180.02562 * 3 2 1 5 5 N 1.30082 * 109.12378 * 359.72387 * 4 3 2 6 6 C 1.35594 * 126.50223 * 180.02562 * 2 1 3 7 7 C 1.48338 * 126.37956 * 359.97438 * 6 2 1 8 8 N 1.31344 * 126.21201 * 0.02562 * 7 6 2 9 9 O 1.21261 * 110.51662 * 179.73889 * 8 7 6 10 10 C 1.34742 * 109.77517 * 0.02562 * 9 8 7 11 11 C 1.40360 * 126.67394 * 180.02562 * 10 9 8 12 12 H 1.08001 * 120.00164 * 179.97438 * 11 10 9 13 13 C 1.40430 * 120.00142 * 359.97438 * 11 10 9 14 14 N 1.30533 * 119.99655 * 0.02562 * 13 11 10 15 15 Si 1.86799 * 120.00160 * 179.97438 * 13 11 10 16 16 H 1.48495 * 109.46909 * 0.02562 * 15 13 11 17 17 H 1.48506 * 109.46691 * 120.00176 * 15 13 11 18 18 H 1.48500 * 109.47349 * 240.00147 * 15 13 11 19 19 N 1.33187 * 106.65277 * 359.97438 * 10 9 8 20 20 H 1.09004 * 109.47366 * 269.97946 * 1 2 3 21 21 H 1.09002 * 109.47222 * 29.97747 * 1 2 3 22 22 H 1.09002 * 109.47589 * 149.97373 * 1 2 3 23 23 H 1.08000 * 125.43833 * 180.02562 * 4 3 2 24 24 H 0.97001 * 119.99441 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.3074 1.0815 0.0000 4 6 3.5788 0.6586 -0.0006 5 7 3.5953 -0.6421 0.0050 6 6 2.3136 -1.0900 -0.0005 7 6 1.8769 -2.5076 -0.0006 8 7 0.6357 -2.9373 -0.0007 9 8 0.6056 -4.1495 -0.0059 10 6 1.8619 -4.6367 -0.0093 11 6 2.2364 -5.9894 -0.0160 12 1 3.2819 -6.2603 -0.0186 13 6 1.2517 -6.9906 -0.0194 14 7 -0.0119 -6.6632 -0.0169 15 14 1.7501 -8.7909 -0.0291 16 1 3.2315 -8.8943 -0.0313 17 1 1.2094 -9.4606 1.1810 18 1 1.2057 -9.4487 -1.2441 19 7 2.6791 -3.5850 -0.0061 20 1 -0.3634 -0.0004 1.0277 21 1 -0.3634 0.8902 -0.5135 22 1 -0.3634 -0.8897 -0.5142 23 1 4.4507 1.2959 -0.0003 24 1 -0.6920 -7.3548 -0.0188 RHF calculation, no. of doubly occupied orbitals= 39 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259653870.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:42:03 Heat of formation + Delta-G solvation = 70.237025 kcal Electronic energy + Delta-G solvation = -14252.568103 eV Core-core repulsion = 11556.605600 eV Total energy + Delta-G solvation = -2695.962503 eV No. of doubly occupied orbitals = 39 Molecular weight (most abundant/longest-lived isotopes) = 221.059 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -43.13354 -42.83887 -34.85203 -34.15805 -33.33394 -32.23111 -30.15230 -26.86980 -26.51302 -23.43839 -21.90733 -21.23545 -20.25677 -18.19024 -16.54235 -16.47632 -15.77321 -15.46530 -15.01419 -14.47890 -13.51890 -13.49029 -12.92073 -12.77584 -12.05307 -11.64000 -11.61333 -11.50906 -11.33080 -10.52073 -10.22891 -10.09735 -10.03764 -9.78007 -8.96126 -8.69881 -7.91522 -7.11731 -5.05566 1.63265 2.59303 2.80897 2.96107 2.98201 3.04230 3.42028 3.72911 4.18283 4.26248 4.92437 5.01692 5.07925 5.29227 5.47480 5.75083 5.81251 6.21713 6.24663 6.40545 6.56529 6.82768 7.23624 7.84759 8.01284 8.09021 8.26003 8.42517 9.87400 10.26016 Molecular weight = 221.06amu Principal moments of inertia in cm(-1) A = 0.067959 B = 0.006977 C = 0.006349 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 411.916227 B = 4012.030251 C = 4408.791615 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 C -0.019 4.019 3 O -0.209 6.209 4 C 0.154 3.846 5 N -0.451 5.451 6 C 0.084 3.916 7 C 0.230 3.770 8 N -0.455 5.455 9 O 0.053 5.947 10 C 0.302 3.698 11 C -0.412 4.412 12 H 0.115 0.885 13 C 0.070 3.930 14 N -0.763 5.763 15 Si 0.937 3.063 16 H -0.255 1.255 17 H -0.268 1.268 18 H -0.268 1.268 19 N -0.587 5.587 20 H 0.083 0.917 21 H 0.072 0.928 22 H 0.107 0.893 23 H 0.250 0.750 24 H 0.292 0.708 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.177 6.658 -0.044 6.661 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.075 4.075 3 O -0.096 6.096 4 C -0.074 4.074 5 N -0.179 5.179 6 C -0.035 4.035 7 C -0.041 4.041 8 N -0.185 5.185 9 O 0.004 5.996 10 C 0.112 3.888 11 C -0.449 4.449 12 H 0.133 0.867 13 C -0.155 4.155 14 N -0.391 5.391 15 Si 0.760 3.240 16 H -0.178 1.178 17 H -0.193 1.193 18 H -0.193 1.193 19 N -0.330 5.330 20 H 0.101 0.899 21 H 0.091 0.909 22 H 0.125 0.875 23 H 0.266 0.734 24 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 0.241 6.911 -0.035 6.915 hybrid contribution -0.190 -0.491 0.018 0.527 sum 0.052 6.420 -0.017 6.420 Atomic orbital electron populations 1.20366 0.83158 1.04614 1.03965 1.23412 0.94925 0.83453 1.05754 1.84331 1.18454 1.36183 1.70667 1.27970 0.85443 0.91268 1.02680 1.70695 1.22323 1.09234 1.15685 1.18351 0.87765 0.90198 1.07216 1.21844 0.87285 0.91542 1.03417 1.74540 1.19851 0.94266 1.29838 1.85508 1.31100 1.12193 1.70826 1.24240 0.77925 0.95700 0.90970 1.18651 0.95988 0.84503 1.45795 0.86695 1.26212 0.94156 1.03351 0.91780 1.69643 1.01144 1.37448 1.30837 0.85761 0.80539 0.78801 0.78898 1.17779 1.19317 1.19313 1.72516 1.29590 0.95711 1.35174 0.89852 0.90868 0.87464 0.73400 0.89657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -1.00 10.00 36.00 0.36 -0.64 14 2 C -0.02 -0.36 7.43 -35.25 -0.26 -0.63 14 3 O -0.21 -3.37 10.74 5.89 0.06 -3.31 14 4 C 0.15 2.35 13.21 52.02 0.69 3.03 14 5 N -0.45 -9.51 11.35 -11.37 -0.13 -9.64 14 6 C 0.08 1.94 7.10 -82.91 -0.59 1.35 14 7 C 0.23 6.21 8.01 -156.47 -1.25 4.96 14 8 N -0.46 -12.26 10.31 31.48 0.32 -11.94 14 9 O 0.05 1.54 9.71 15.17 0.15 1.69 14 10 C 0.30 8.74 7.80 -16.33 -0.13 8.61 14 11 C -0.41 -10.95 9.48 -37.96 -0.36 -11.31 14 12 H 0.12 2.91 7.85 -52.49 -0.41 2.50 14 13 C 0.07 1.68 5.50 -17.28 -0.10 1.59 14 14 N -0.76 -19.14 12.05 55.57 0.67 -18.47 14 15 Si 0.94 17.49 29.56 -169.99 -5.03 12.46 14 16 H -0.25 -4.68 7.11 56.52 0.40 -4.28 14 17 H -0.27 -4.87 7.11 56.52 0.40 -4.47 14 18 H -0.27 -4.87 7.11 56.52 0.40 -4.47 14 19 N -0.59 -17.11 11.64 -11.62 -0.14 -17.25 14 20 H 0.08 1.19 8.14 -51.93 -0.42 0.77 14 21 H 0.07 0.89 8.14 -51.93 -0.42 0.47 14 22 H 0.11 1.90 6.61 -51.93 -0.34 1.56 14 23 H 0.25 2.17 8.06 -52.49 -0.42 1.75 14 24 H 0.29 6.43 8.29 -40.82 -0.34 6.09 14 LS Contribution 232.29 15.07 3.50 3.50 Total: -1.00 -32.69 232.29 -3.38 -36.07 By element: Atomic # 1 Polarization: 1.08 SS G_CDS: -1.16 Total: -0.08 kcal Atomic # 6 Polarization: 8.60 SS G_CDS: -1.64 Total: 6.96 kcal Atomic # 7 Polarization: -58.03 SS G_CDS: 0.73 Total: -57.30 kcal Atomic # 8 Polarization: -1.83 SS G_CDS: 0.21 Total: -1.62 kcal Atomic # 14 Polarization: 17.49 SS G_CDS: -5.03 Total: 12.46 kcal Total LS contribution 3.50 Total: 3.50 kcal Total: -32.69 -3.38 -36.07 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259653870.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.311 kcal (2) G-P(sol) polarization free energy of solvation -32.694 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.617 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.380 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.074 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.237 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds