Wall clock time and date at job start Mon Mar 30 2020 04:10:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.40040 * 110.99814 * 2 1 4 4 C 1.39370 * 129.92071 * 40.10655 * 3 2 1 5 5 C 1.39250 * 119.86835 * 179.82208 * 4 3 2 6 6 F 1.35108 * 119.76262 * 179.97438 * 5 4 3 7 7 C 1.38529 * 120.34149 * 359.93499 * 5 4 3 8 8 C 1.38259 * 119.85982 * 0.15075 * 7 5 4 9 9 C 1.37942 * 120.10983 * 0.02562 * 8 7 5 10 10 C 1.51579 * 131.53504 * 179.72067 * 9 8 7 11 11 C 1.47903 * 111.00216 * 239.98709 * 2 1 3 12 12 H 1.08995 * 110.77897 * 267.29148 * 11 2 1 13 13 C 1.50697 * 110.77856 * 30.72715 * 11 2 1 14 14 H 1.07999 * 120.00401 * 51.70924 * 13 11 2 15 15 C 1.37878 * 119.99895 * 231.71724 * 13 11 2 16 16 N 1.31519 * 119.99897 * 6.19296 * 15 13 11 17 17 Si 1.86797 * 120.00144 * 186.19589 * 15 13 11 18 18 H 1.48506 * 109.47047 * 89.99672 * 17 15 13 19 19 H 1.48498 * 109.47268 * 209.99597 * 17 15 13 20 20 H 1.48503 * 109.47197 * 330.00050 * 17 15 13 21 21 H 1.09006 * 109.46825 * 173.83954 * 1 2 3 22 22 H 1.08992 * 109.47079 * 293.83923 * 1 2 3 23 23 H 1.09000 * 109.47294 * 53.84391 * 1 2 3 24 24 H 1.08003 * 119.90595 * 359.66356 * 4 3 2 25 25 H 1.08009 * 120.06982 * 180.12854 * 7 5 4 26 26 H 1.07999 * 119.94880 * 179.97438 * 8 7 5 27 27 H 1.08999 * 110.74264 * 77.89354 * 10 9 8 28 28 H 1.09001 * 110.74314 * 314.73942 * 10 9 8 29 29 H 0.96994 * 119.99954 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9708 1.3074 0.0000 4 6 1.5281 2.4353 0.6886 5 6 2.1952 3.6479 0.5349 6 9 1.7639 4.7401 1.2030 7 6 3.2982 3.7391 -0.2983 8 6 3.7376 2.6215 -0.9834 9 6 3.0793 1.4179 -0.8387 10 6 3.3272 0.0561 -1.4565 11 6 1.9991 -0.6907 -1.1956 12 1 2.1826 -1.7440 -0.9841 13 6 1.0600 -0.5340 -2.3638 14 1 0.7144 0.4480 -2.6510 15 6 0.6418 -1.6446 -3.0658 16 7 0.9628 -2.8483 -2.6443 17 14 -0.3805 -1.4395 -4.6156 18 1 0.5194 -1.3414 -5.7929 19 1 -1.2783 -2.6116 -4.7752 20 1 -1.1954 -0.2024 -4.5111 21 1 -0.3633 -1.0218 -0.1103 22 1 -0.3633 0.4153 0.9399 23 1 -0.3634 0.6063 -0.8297 24 1 0.6674 2.3667 1.3374 25 1 3.8136 4.6813 -0.4127 26 1 4.5971 2.6910 -1.6337 27 1 4.1566 -0.4478 -0.9602 28 1 3.5165 0.1461 -2.5262 29 1 0.6689 -3.6296 -3.1383 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260960743.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 04:10:23 Heat of formation + Delta-G solvation = -14.174761 kcal Electronic energy + Delta-G solvation = -14807.423169 eV Core-core repulsion = 12223.713429 eV Total energy + Delta-G solvation = -2583.709740 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 221.091 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.46384 -39.81490 -35.92644 -32.75969 -31.70341 -29.37412 -27.98677 -25.31807 -24.58658 -21.84769 -20.77019 -19.98705 -17.11935 -16.39742 -16.07201 -15.16327 -15.09430 -14.71110 -14.05776 -13.83942 -13.55526 -13.06799 -12.56276 -12.31112 -11.84522 -11.45733 -11.24888 -11.06496 -10.91493 -10.74939 -10.52982 -10.34048 -9.85459 -9.72388 -8.95255 -8.78530 -8.12175 -6.96049 -6.25577 -4.38272 1.73105 1.85478 3.15916 3.24133 3.27486 4.08547 4.22586 4.52475 4.90918 5.17032 5.31622 5.41085 5.59262 5.86971 5.93043 6.21544 6.29927 6.42892 6.47055 6.54695 6.58246 6.73002 6.85983 6.91362 7.15628 7.35219 7.45770 7.62337 7.72248 8.12293 8.16317 8.76280 9.28611 10.75378 Molecular weight = 221.09amu Principal moments of inertia in cm(-1) A = 0.039188 B = 0.008450 C = 0.008314 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 714.334205 B = 3312.742639 C = 3366.898265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.048 3.952 2 N -0.486 5.486 3 C 0.150 3.850 4 C -0.196 4.196 5 C 0.109 3.891 6 F -0.150 7.150 7 C -0.199 4.199 8 C -0.063 4.063 9 C -0.139 4.139 10 C -0.084 4.084 11 C 0.190 3.810 12 H 0.099 0.901 13 C -0.536 4.536 14 H 0.058 0.942 15 C 0.078 3.922 16 N -0.880 5.880 17 Si 0.895 3.105 18 H -0.276 1.276 19 H -0.284 1.284 20 H -0.272 1.272 21 H 0.074 0.926 22 H 0.041 0.959 23 H 0.045 0.955 24 H 0.125 0.875 25 H 0.125 0.875 26 H 0.123 0.877 27 H 0.062 0.938 28 H 0.076 0.924 29 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.305 7.050 2.841 7.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 N -0.197 5.197 3 C 0.048 3.952 4 C -0.219 4.219 5 C 0.089 3.911 6 F -0.128 7.128 7 C -0.219 4.219 8 C -0.082 4.082 9 C -0.142 4.142 10 C -0.122 4.122 11 C 0.088 3.912 12 H 0.116 0.884 13 C -0.574 4.574 14 H 0.076 0.924 15 C -0.128 4.128 16 N -0.516 5.516 17 Si 0.722 3.278 18 H -0.202 1.202 19 H -0.209 1.209 20 H -0.197 1.197 21 H 0.093 0.907 22 H 0.059 0.941 23 H 0.063 0.937 24 H 0.143 0.857 25 H 0.143 0.857 26 H 0.141 0.859 27 H 0.081 0.919 28 H 0.094 0.906 29 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 2.349 6.459 3.276 7.614 hybrid contribution -0.854 0.625 -1.276 1.658 sum 1.495 7.084 2.000 7.511 Atomic orbital electron populations 1.22061 0.86133 1.02942 0.98726 1.61068 1.09457 1.08281 1.40892 1.19810 0.94426 0.89196 0.91782 1.20461 1.03815 0.90610 1.06981 1.17526 0.95694 0.82584 0.95265 1.91427 1.89535 1.52803 1.79082 1.20682 0.99013 0.99802 1.02441 1.20131 0.98873 0.90866 0.98340 1.20977 0.98011 0.96113 0.99115 1.21680 0.99920 0.90521 1.00096 1.20755 0.89703 0.96212 0.84539 0.88361 1.21260 1.28976 0.93462 1.13703 0.92357 1.25004 0.95131 0.95038 0.97585 1.69878 1.45143 0.97786 1.38809 0.86541 0.80112 0.77973 0.83187 1.20197 1.20933 1.19660 0.90745 0.94070 0.93665 0.85718 0.85695 0.85947 0.91946 0.90556 0.92215 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.99 8.21 60.06 0.49 1.48 15 2 N -0.49 -10.79 5.29 -170.52 -0.90 -11.69 15 3 C 0.15 3.13 5.89 -83.24 -0.49 2.64 15 4 C -0.20 -3.70 9.58 -38.78 -0.37 -4.07 15 5 C 0.11 1.93 7.32 -39.10 -0.29 1.64 15 6 F -0.15 -2.54 17.26 2.25 0.04 -2.50 15 7 C -0.20 -3.26 10.04 -39.47 -0.40 -3.66 15 8 C -0.06 -1.08 10.03 -39.68 -0.40 -1.48 15 9 C -0.14 -2.79 6.24 -103.85 -0.65 -3.44 15 10 C -0.08 -1.77 6.54 -26.62 -0.17 -1.95 15 11 C 0.19 4.55 3.55 -67.48 -0.24 4.31 15 12 H 0.10 2.59 7.03 -51.93 -0.37 2.22 15 13 C -0.54 -13.66 6.33 -34.44 -0.22 -13.88 15 14 H 0.06 1.54 7.45 -52.49 -0.39 1.15 15 15 C 0.08 2.01 5.45 -17.82 -0.10 1.91 15 16 N -0.88 -23.57 12.67 55.43 0.70 -22.87 15 17 Si 0.89 20.05 29.54 -169.99 -5.02 15.03 15 18 H -0.28 -6.16 7.11 56.52 0.40 -5.75 15 19 H -0.28 -6.31 7.11 56.52 0.40 -5.91 15 20 H -0.27 -6.10 7.11 56.52 0.40 -5.70 15 21 H 0.07 1.62 8.09 -51.93 -0.42 1.20 15 22 H 0.04 0.74 7.61 -51.93 -0.40 0.34 15 23 H 0.04 0.98 6.86 -51.93 -0.36 0.62 15 24 H 0.12 2.17 7.56 -52.48 -0.40 1.78 15 25 H 0.13 1.70 8.06 -52.48 -0.42 1.27 15 26 H 0.12 1.75 8.06 -52.49 -0.42 1.33 15 27 H 0.06 1.22 8.14 -51.93 -0.42 0.80 15 28 H 0.08 1.61 7.91 -51.93 -0.41 1.20 15 29 H 0.27 6.82 8.31 -40.82 -0.34 6.48 15 LS Contribution 250.35 15.07 3.77 3.77 Total: -1.00 -26.33 250.35 -7.37 -33.70 By element: Atomic # 1 Polarization: 4.17 SS G_CDS: -3.14 Total: 1.03 kcal Atomic # 6 Polarization: -13.65 SS G_CDS: -2.83 Total: -16.48 kcal Atomic # 7 Polarization: -34.36 SS G_CDS: -0.20 Total: -34.56 kcal Atomic # 9 Polarization: -2.54 SS G_CDS: 0.04 Total: -2.50 kcal Atomic # 14 Polarization: 20.05 SS G_CDS: -5.02 Total: 15.03 kcal Total LS contribution 3.77 Total: 3.77 kcal Total: -26.33 -7.37 -33.70 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260960743.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.527 kcal (2) G-P(sol) polarization free energy of solvation -26.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.702 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds