Wall clock time and date at job start Mon Mar 30 2020 02:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52997 * 109.47264 * 2 1 4 4 C 1.50710 * 109.46542 * 119.99749 * 2 1 3 5 5 N 1.34911 * 126.03769 * 299.97391 * 4 2 1 6 6 H 0.96997 * 124.72606 * 0.02562 * 5 4 2 7 7 C 1.36755 * 110.54764 * 180.02562 * 5 4 2 8 8 C 1.34635 * 108.99382 * 359.73477 * 7 5 4 9 9 C 1.39331 * 126.03249 * 120.00380 * 4 2 1 10 10 C 1.41346 * 127.14026 * 359.97100 * 9 4 2 11 11 H 1.08005 * 119.99956 * 0.02562 * 10 9 4 12 12 C 1.39675 * 119.99878 * 180.02562 * 10 9 4 13 13 N 1.31055 * 120.00397 * 359.97438 * 12 10 9 14 14 Si 1.86803 * 119.99858 * 179.97438 * 12 10 9 15 15 H 1.48498 * 109.47174 * 270.00029 * 14 12 10 16 16 H 1.48501 * 109.47062 * 29.99980 * 14 12 10 17 17 H 1.48503 * 109.47284 * 149.99675 * 14 12 10 18 18 C 1.50835 * 108.18179 * 179.69346 * 8 7 5 19 19 O 1.44027 * 105.85720 * 343.00046 * 18 8 7 20 20 C 1.43965 * 104.25992 * 27.50660 * 19 18 8 21 21 H 1.08997 * 109.47844 * 300.00614 * 1 2 3 22 22 H 1.09005 * 109.47027 * 60.00061 * 1 2 3 23 23 H 1.08999 * 109.47573 * 180.02562 * 1 2 3 24 24 H 1.08997 * 109.47389 * 239.99107 * 2 1 3 25 25 H 1.09000 * 109.47228 * 179.97438 * 3 2 1 26 26 H 1.08998 * 109.46861 * 299.99577 * 3 2 1 27 27 H 1.09001 * 109.47292 * 59.99911 * 3 2 1 28 28 H 0.97001 * 119.99955 * 179.97438 * 13 12 10 29 29 H 1.08998 * 110.35711 * 223.78933 * 18 8 7 30 30 H 1.09004 * 110.01043 * 102.02806 * 18 8 7 31 31 H 1.08999 * 110.16419 * 213.05616 * 20 19 18 32 32 H 1.09002 * 110.22285 * 91.30718 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0322 -0.7104 1.2306 5 7 1.7828 -0.3569 2.5085 6 1 1.2446 0.4043 2.7762 7 6 2.3945 -1.2214 3.3738 8 6 3.0504 -2.1597 2.6652 9 6 2.8365 -1.8480 1.2494 10 6 3.3376 -2.5574 0.1343 11 1 3.1031 -2.2258 -0.8665 12 6 4.1359 -3.6872 0.3266 13 7 4.4209 -4.0893 1.5410 14 14 4.7976 -4.6252 -1.1472 15 1 3.8294 -5.6816 -1.5369 16 1 4.9923 -3.6888 -2.2831 17 1 6.0970 -5.2508 -0.7931 18 6 3.7235 -3.0976 3.6359 19 8 3.7447 -2.4072 4.8998 20 6 2.6087 -1.5247 4.8409 21 1 -0.3635 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 0.0005 24 1 1.8933 -0.5139 -0.8899 25 1 3.1300 1.4425 0.0005 26 1 1.6767 1.9562 -0.8900 27 1 1.6767 1.9563 0.8900 28 1 4.9750 -4.8742 1.6745 29 1 4.7403 -3.3156 3.3094 30 1 3.1502 -4.0208 3.7212 31 1 2.8182 -0.6055 5.3878 32 1 1.7282 -2.0158 5.2554 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259993352.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:57:31 Heat of formation + Delta-G solvation = 7.402101 kcal Electronic energy + Delta-G solvation = -15376.984455 eV Core-core repulsion = 12917.670663 eV Total energy + Delta-G solvation = -2459.313792 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.116 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -39.98928 -37.08438 -34.01711 -33.44275 -29.47285 -28.55341 -27.12274 -26.57946 -24.43047 -22.64811 -20.30539 -19.17049 -17.87054 -16.33626 -15.54850 -15.00713 -14.75243 -14.17219 -13.92851 -13.43109 -12.98025 -12.61895 -12.17039 -11.91569 -11.64306 -11.56711 -11.47342 -11.11861 -10.89650 -10.56680 -10.51496 -10.26233 -10.02206 -9.61709 -9.30711 -9.19832 -8.83401 -7.14961 -6.50134 -6.27290 -3.92065 3.09404 3.22201 3.25690 3.54663 4.13907 4.25654 4.31198 5.17434 5.55964 5.57336 5.65126 5.92834 5.93727 6.07175 6.13251 6.16903 6.21328 6.27582 6.47208 6.48448 6.83129 6.87673 6.89660 7.08365 7.35137 7.44680 7.57282 7.76030 7.94582 8.20227 8.48022 8.86322 9.00387 9.25093 9.29461 10.60067 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.019102 B = 0.014505 C = 0.008768 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1465.469696 B = 1929.848663 C = 3192.795021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.004 3.996 3 C -0.140 4.140 4 C -0.127 4.127 5 N -0.533 5.533 6 H 0.383 0.617 7 C -0.103 4.103 8 C -0.179 4.179 9 C 0.078 3.922 10 C -0.441 4.441 11 H 0.069 0.931 12 C 0.071 3.929 13 N -0.828 5.828 14 Si 0.908 3.092 15 H -0.275 1.275 16 H -0.268 1.268 17 H -0.281 1.281 18 C 0.146 3.854 19 O -0.394 6.394 20 C 0.149 3.851 21 H 0.039 0.961 22 H 0.043 0.957 23 H 0.054 0.946 24 H 0.083 0.917 25 H 0.054 0.946 26 H 0.043 0.957 27 H 0.039 0.961 28 H 0.271 0.729 29 H 0.114 0.886 30 H 0.043 0.957 31 H 0.064 0.936 32 H 0.051 0.949 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.898 4.654 0.108 6.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.015 4.015 3 C -0.198 4.198 4 C -0.234 4.234 5 N -0.130 5.130 6 H 0.215 0.785 7 C -0.215 4.215 8 C -0.190 4.190 9 C 0.071 3.929 10 C -0.474 4.474 11 H 0.087 0.913 12 C -0.140 4.140 13 N -0.459 5.459 14 Si 0.734 3.266 15 H -0.201 1.201 16 H -0.192 1.192 17 H -0.206 1.206 18 C 0.071 3.929 19 O -0.312 6.312 20 C 0.071 3.929 21 H 0.058 0.942 22 H 0.062 0.938 23 H 0.073 0.927 24 H 0.101 0.899 25 H 0.074 0.926 26 H 0.062 0.938 27 H 0.059 0.941 28 H 0.082 0.918 29 H 0.132 0.868 30 H 0.061 0.939 31 H 0.083 0.917 32 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -3.667 4.530 0.384 5.841 hybrid contribution -0.170 -0.127 -0.675 0.707 sum -3.838 4.402 -0.291 5.847 Atomic orbital electron populations 1.21849 0.96802 1.01338 0.99758 1.19163 0.93329 0.93754 0.95287 1.21851 1.01403 0.96766 0.99747 1.19822 1.16187 1.04618 0.82777 1.39753 1.44469 1.24558 1.04230 0.78476 1.21118 1.07502 0.98503 0.94353 1.21331 1.05635 0.98195 0.93836 1.17537 0.93966 0.91175 0.90184 1.18744 1.27242 1.08683 0.92756 0.91332 1.25705 0.94952 0.96979 0.96371 1.69834 1.32618 1.22748 1.20690 0.86330 0.78411 0.79790 0.82043 1.20062 1.19197 1.20646 1.21420 1.02999 0.91020 0.77500 1.89097 1.46731 1.56121 1.39295 1.20671 0.89626 0.93291 0.89346 0.94151 0.93767 0.92668 0.89897 0.92642 0.93775 0.94146 0.91830 0.86849 0.93892 0.91750 0.93118 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.29 9.17 37.16 0.34 -1.95 16 2 C 0.00 0.08 3.30 -91.77 -0.30 -0.23 16 3 C -0.14 -2.30 9.18 37.16 0.34 -1.96 16 4 C -0.13 -2.93 5.80 -80.83 -0.47 -3.40 16 5 N -0.53 -11.37 5.91 -4.49 -0.03 -11.40 16 6 H 0.38 6.81 8.96 -40.82 -0.37 6.45 16 7 C -0.10 -2.39 8.22 -81.36 -0.67 -3.06 16 8 C -0.18 -4.74 6.27 -102.49 -0.64 -5.38 16 9 C 0.08 2.10 6.09 -104.96 -0.64 1.46 16 10 C -0.44 -11.97 9.13 -37.86 -0.35 -12.31 16 11 H 0.07 1.78 6.89 -52.48 -0.36 1.42 16 12 C 0.07 1.85 5.49 -17.35 -0.10 1.75 16 13 N -0.83 -21.85 8.02 55.53 0.45 -21.40 16 14 Si 0.91 19.71 29.56 -169.99 -5.02 14.68 16 15 H -0.27 -5.92 7.11 56.52 0.40 -5.52 16 16 H -0.27 -5.74 7.11 56.52 0.40 -5.34 16 17 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 18 C 0.15 3.66 5.74 36.07 0.21 3.87 16 19 O -0.39 -9.15 11.77 -35.23 -0.41 -9.56 16 20 C 0.15 3.05 7.64 36.32 0.28 3.33 16 21 H 0.04 0.61 8.14 -51.93 -0.42 0.19 16 22 H 0.04 0.61 8.14 -51.93 -0.42 0.19 16 23 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 24 H 0.08 1.67 6.92 -51.93 -0.36 1.31 16 25 H 0.05 0.98 8.14 -51.93 -0.42 0.55 16 26 H 0.04 0.62 8.14 -51.93 -0.42 0.19 16 27 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 28 H 0.27 6.63 8.30 -40.82 -0.34 6.29 16 29 H 0.11 2.98 6.19 -51.93 -0.32 2.66 16 30 H 0.04 1.09 8.12 -51.93 -0.42 0.67 16 31 H 0.06 1.15 8.14 -51.93 -0.42 0.72 16 32 H 0.05 0.95 8.14 -51.93 -0.42 0.52 16 LS Contribution 263.12 15.07 3.97 3.97 Total: -1.00 -28.78 263.12 -7.40 -36.18 By element: Atomic # 1 Polarization: 9.77 SS G_CDS: -4.35 Total: 5.43 kcal Atomic # 6 Polarization: -15.89 SS G_CDS: -2.00 Total: -17.88 kcal Atomic # 7 Polarization: -33.22 SS G_CDS: 0.42 Total: -32.80 kcal Atomic # 8 Polarization: -9.15 SS G_CDS: -0.41 Total: -9.56 kcal Atomic # 14 Polarization: 19.71 SS G_CDS: -5.02 Total: 14.68 kcal Total LS contribution 3.97 Total: 3.97 kcal Total: -28.78 -7.40 -36.18 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259993352.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.579 kcal (2) G-P(sol) polarization free energy of solvation -28.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.177 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds