Wall clock time and date at job start Mon Mar 30 2020 02:50:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46900 * 111.00355 * 2 1 4 4 H 1.08995 * 109.47046 * 37.43619 * 3 2 1 5 5 C 1.50697 * 109.47273 * 157.43883 * 3 2 1 6 6 H 1.08005 * 119.99814 * 114.70262 * 5 3 2 7 7 C 1.37874 * 120.00134 * 294.70146 * 5 3 2 8 8 N 1.31509 * 119.99872 * 358.81747 * 7 5 3 9 9 Si 1.86801 * 119.99939 * 178.81666 * 7 5 3 10 10 H 1.48504 * 109.46992 * 270.00324 * 9 7 5 11 11 H 1.48501 * 109.47080 * 30.00082 * 9 7 5 12 12 H 1.48501 * 109.46874 * 150.00100 * 9 7 5 13 13 C 1.50708 * 109.47093 * 277.43951 * 3 2 1 14 14 C 1.38262 * 119.94332 * 312.69899 * 13 3 2 15 15 C 1.38145 * 120.05299 * 179.72360 * 14 13 3 16 16 C 1.38737 * 119.94079 * 0.54850 * 15 14 13 17 17 O 1.35900 * 120.05372 * 179.74644 * 16 15 14 18 18 C 1.42908 * 116.99927 * 359.97438 * 17 16 15 19 19 C 1.38720 * 119.89330 * 359.72399 * 16 15 14 20 20 C 1.38156 * 119.94493 * 0.02562 * 19 16 15 21 21 H 1.09002 * 109.46960 * 304.87206 * 1 2 3 22 22 H 1.09001 * 109.47275 * 64.86813 * 1 2 3 23 23 H 1.08999 * 109.47219 * 184.87061 * 1 2 3 24 24 H 1.00900 * 110.99935 * 236.04664 * 2 1 3 25 25 H 0.96997 * 120.00089 * 354.49190 * 8 7 5 26 26 H 1.07991 * 119.97313 * 0.02562 * 14 13 3 27 27 H 1.08000 * 120.02962 * 180.27305 * 15 14 13 28 28 H 1.08999 * 109.46647 * 299.99519 * 18 17 16 29 29 H 1.09000 * 109.47512 * 59.99651 * 18 17 16 30 30 H 1.09003 * 109.46979 * 180.02562 * 18 17 16 31 31 H 1.07999 * 120.03243 * 179.97438 * 19 16 15 32 32 H 1.07997 * 119.97140 * 180.02562 * 20 19 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 1 1.3640 2.0030 0.6247 5 6 3.4004 1.3701 0.5451 6 1 4.2280 1.6400 -0.0943 7 6 3.6294 1.0245 1.8600 8 7 2.6195 0.7184 2.6449 9 14 5.3741 0.9909 2.5267 10 1 5.9533 -0.3623 2.3296 11 1 6.1992 1.9925 1.8048 12 1 5.3566 1.3157 3.9757 13 6 2.0038 1.9063 -1.4089 14 6 2.5154 1.1358 -2.4367 15 6 2.5189 1.6216 -3.7299 16 6 2.0189 2.8883 -3.9951 17 8 2.0260 3.3705 -5.2656 18 6 2.5638 2.5192 -6.2797 19 6 1.5114 3.6616 -2.9613 20 6 1.5053 3.1692 -1.6705 21 1 -0.3633 0.5876 0.8431 22 1 -0.3634 0.4365 -0.9304 23 1 -0.3633 -1.0239 0.0873 24 1 1.8305 -0.5261 -0.7814 25 1 1.7093 0.8127 2.3231 26 1 2.9081 0.1515 -2.2290 27 1 2.9146 1.0176 -4.5330 28 1 3.6039 2.2901 -6.0476 29 1 1.9884 1.5944 -6.3206 30 1 2.5099 3.0241 -7.2442 31 1 1.1220 4.6481 -3.1652 32 1 1.1099 3.7708 -0.8654 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259173220.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:50:43 Heat of formation + Delta-G solvation = -13.875896 kcal Electronic energy + Delta-G solvation = -14879.458595 eV Core-core repulsion = 12419.222120 eV Total energy + Delta-G solvation = -2460.236475 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.116 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.77697 -37.65236 -35.05197 -32.01331 -30.62241 -29.96993 -27.50888 -25.93945 -23.64876 -22.81636 -21.67563 -20.19756 -17.87211 -16.85133 -15.98999 -15.55562 -15.30489 -14.32652 -13.80961 -13.65619 -13.32438 -13.15502 -12.80849 -12.43267 -12.36842 -12.03598 -11.74189 -11.24919 -11.01209 -10.68756 -10.66037 -10.32298 -10.08861 -9.95382 -8.76447 -8.52787 -8.31559 -7.51387 -7.18933 -6.21370 -3.99047 1.81695 1.97472 3.49293 3.49573 3.52369 3.67725 4.28526 4.62381 5.04993 5.17249 5.22297 5.30723 5.33762 5.45509 5.72520 5.79508 5.90542 5.96029 6.11864 6.14476 6.26328 6.43382 6.56580 6.72955 6.83637 6.93903 7.22427 7.33612 7.73249 8.02309 8.33205 8.54131 8.67736 9.00132 9.81213 11.17825 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.033504 B = 0.007835 C = 0.007064 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 835.508531 B = 3572.931034 C = 3962.806648 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 N -0.671 5.671 3 C 0.236 3.764 4 H 0.037 0.963 5 C -0.593 4.593 6 H 0.047 0.953 7 C 0.038 3.962 8 N -0.890 5.890 9 Si 1.066 2.934 10 H -0.288 1.288 11 H -0.291 1.291 12 H -0.286 1.286 13 C -0.095 4.095 14 C -0.080 4.080 15 C -0.206 4.206 16 C 0.096 3.904 17 O -0.325 6.325 18 C 0.031 3.969 19 C -0.152 4.152 20 C -0.087 4.087 21 H 0.054 0.946 22 H 0.001 0.999 23 H 0.048 0.952 24 H 0.321 0.679 25 H 0.279 0.721 26 H 0.122 0.878 27 H 0.119 0.881 28 H 0.052 0.948 29 H 0.051 0.949 30 H 0.093 0.907 31 H 0.121 0.879 32 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.765 2.034 -12.694 12.976 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.302 5.302 3 C 0.130 3.870 4 H 0.055 0.945 5 C -0.632 4.632 6 H 0.066 0.934 7 C -0.170 4.170 8 N -0.524 5.524 9 Si 0.895 3.105 10 H -0.215 1.215 11 H -0.217 1.217 12 H -0.212 1.212 13 C -0.097 4.097 14 C -0.098 4.098 15 C -0.225 4.225 16 C 0.052 3.948 17 O -0.240 6.240 18 C -0.065 4.065 19 C -0.170 4.170 20 C -0.105 4.105 21 H 0.073 0.927 22 H 0.019 0.981 23 H 0.067 0.933 24 H 0.139 0.861 25 H 0.090 0.910 26 H 0.140 0.860 27 H 0.137 0.863 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.112 0.888 31 H 0.139 0.861 32 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -0.914 1.766 -10.718 10.901 hybrid contribution -0.931 0.356 -2.491 2.683 sum -1.844 2.122 -13.208 13.504 Atomic orbital electron populations 1.22156 0.91609 0.99976 0.98504 1.61333 1.04037 1.16562 1.48219 1.18496 0.97104 0.85304 0.86142 0.94508 1.21736 0.90846 1.52526 0.98117 0.93434 1.25644 1.05153 0.92750 0.93492 1.70574 1.00767 1.41560 1.39492 0.83608 0.74618 0.76400 0.75836 1.21528 1.21700 1.21188 1.21226 0.95543 0.94192 0.98757 1.20774 0.97664 1.00110 0.91299 1.21132 1.07169 0.96009 0.98176 1.18881 0.98941 0.93167 0.83773 1.86003 1.79284 1.43899 1.14769 1.22940 0.98307 0.95044 0.90176 1.20329 1.05197 1.00167 0.91339 1.20933 0.98829 0.95739 0.95020 0.92681 0.98050 0.93347 0.86090 0.90955 0.85964 0.86340 0.92940 0.93054 0.88835 0.86108 0.85931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.55 10.52 60.06 0.63 1.19 16 2 N -0.67 -15.47 5.78 -116.50 -0.67 -16.15 16 3 C 0.24 5.78 1.63 -70.01 -0.11 5.67 16 4 H 0.04 0.97 7.08 -51.93 -0.37 0.61 16 5 C -0.59 -16.38 8.61 -34.44 -0.30 -16.68 16 6 H 0.05 1.34 7.74 -52.48 -0.41 0.93 16 7 C 0.04 1.08 5.41 -17.82 -0.10 0.99 16 8 N -0.89 -26.60 13.52 55.43 0.75 -25.85 16 9 Si 1.07 25.25 29.90 -169.99 -5.08 20.17 16 10 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 11 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 12 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 13 C -0.09 -2.03 4.60 -104.60 -0.48 -2.51 16 14 C -0.08 -1.56 8.95 -39.61 -0.35 -1.91 16 15 C -0.21 -3.52 9.04 -39.43 -0.36 -3.88 16 16 C 0.10 1.67 6.69 -39.22 -0.26 1.41 16 17 O -0.33 -4.99 10.50 -19.43 -0.20 -5.20 16 18 C 0.03 0.33 9.81 101.05 0.99 1.32 16 19 C -0.15 -2.68 9.99 -39.43 -0.39 -3.07 16 20 C -0.09 -1.69 9.66 -39.60 -0.38 -2.07 16 21 H 0.05 1.12 7.94 -51.93 -0.41 0.71 16 22 H 0.00 0.02 8.00 -51.93 -0.42 -0.40 16 23 H 0.05 0.87 8.14 -51.93 -0.42 0.44 16 24 H 0.32 6.95 6.84 -39.29 -0.27 6.68 16 25 H 0.28 8.33 6.66 -40.82 -0.27 8.06 16 26 H 0.12 2.33 6.92 -52.49 -0.36 1.96 16 27 H 0.12 1.68 6.30 -52.49 -0.33 1.35 16 28 H 0.05 0.54 7.66 -51.93 -0.40 0.14 16 29 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 30 H 0.09 0.76 8.14 -51.93 -0.42 0.33 16 31 H 0.12 1.87 8.06 -52.49 -0.42 1.44 16 32 H 0.12 2.25 7.98 -52.49 -0.42 1.83 16 LS Contribution 271.06 15.07 4.08 4.08 Total: -1.00 -30.75 271.06 -6.36 -37.10 By element: Atomic # 1 Polarization: 9.50 SS G_CDS: -4.11 Total: 5.38 kcal Atomic # 6 Polarization: -18.43 SS G_CDS: -1.11 Total: -19.55 kcal Atomic # 7 Polarization: -42.07 SS G_CDS: 0.08 Total: -41.99 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -0.20 Total: -5.20 kcal Atomic # 14 Polarization: 25.25 SS G_CDS: -5.08 Total: 20.17 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -30.75 -6.36 -37.10 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259173220.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.225 kcal (2) G-P(sol) polarization free energy of solvation -30.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds