Wall clock time and date at job start Mon Mar 30 2020 02:49:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46908 * 1 3 3 C 1.46899 * 111.00063 * 2 1 4 4 C 1.46897 * 110.99650 * 123.95605 * 2 1 3 5 5 H 1.08995 * 109.47146 * 291.16284 * 4 2 1 6 6 C 1.50698 * 109.47345 * 51.17104 * 4 2 1 7 7 H 1.07999 * 120.00366 * 61.16461 * 6 4 2 8 8 C 1.37882 * 119.99665 * 241.16474 * 6 4 2 9 9 N 1.31515 * 119.99683 * 188.01707 * 8 6 4 10 10 Si 1.86800 * 119.99961 * 8.01976 * 8 6 4 11 11 H 1.48501 * 109.47267 * 275.26647 * 10 8 6 12 12 H 1.48501 * 109.47016 * 35.26550 * 10 8 6 13 13 H 1.48505 * 109.47140 * 155.26510 * 10 8 6 14 14 C 1.50707 * 109.46532 * 171.16602 * 4 2 1 15 15 C 1.38168 * 120.03248 * 334.18474 * 14 4 2 16 16 C 1.38245 * 120.05676 * 179.74800 * 15 14 4 17 17 C 1.38283 * 120.10695 * 0.55179 * 16 15 14 18 18 C 1.38122 * 120.06277 * 359.70112 * 17 16 15 19 19 C 1.38711 * 120.02331 * 154.46300 * 14 4 2 20 20 O 1.35899 * 120.05833 * 359.95135 * 19 14 4 21 21 H 1.08995 * 109.47227 * 291.84677 * 1 2 3 22 22 H 1.09000 * 109.47202 * 51.84387 * 1 2 3 23 23 H 1.08995 * 109.47025 * 171.84304 * 1 2 3 24 24 H 1.08991 * 109.47298 * 184.05422 * 3 2 1 25 25 H 1.09001 * 109.47395 * 304.05971 * 3 2 1 26 26 H 1.09004 * 109.47009 * 64.05405 * 3 2 1 27 27 H 0.97006 * 119.99346 * 180.02562 * 9 8 6 28 28 H 1.08000 * 119.96682 * 0.02562 * 15 14 4 29 29 H 1.07994 * 119.94109 * 180.25575 * 16 15 14 30 30 H 1.08007 * 119.96773 * 179.72155 * 17 16 15 31 31 H 1.08001 * 120.03009 * 180.02562 * 18 17 16 32 32 H 0.96698 * 113.99552 * 90.00092 * 20 19 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9954 -0.7660 1.1376 5 1 1.7793 -0.2349 2.0644 6 6 1.3438 -2.1244 1.1731 7 1 1.4657 -2.8038 0.3425 8 6 0.5918 -2.4997 2.2662 9 7 0.1550 -3.7358 2.3706 10 14 0.1934 -1.2526 3.5986 11 1 1.3176 -1.1862 4.5666 12 1 -0.0083 0.0832 2.9820 13 1 -1.0458 -1.6633 4.3065 14 6 3.4862 -0.9279 0.9873 15 6 4.0628 -0.8905 -0.2678 16 6 5.4309 -1.0337 -0.4058 17 6 6.2243 -1.2261 0.7104 18 6 5.6522 -1.2696 1.9668 19 6 4.2800 -1.1204 2.1084 20 8 3.7147 -1.1623 3.3436 21 1 -0.3633 0.3824 0.9538 22 1 -0.3633 0.6349 -0.8081 23 1 -0.3633 -1.0172 -0.1458 24 1 3.0827 1.3433 -0.0726 25 1 1.5884 1.9169 -0.8514 26 1 1.7060 1.8717 0.9241 27 1 -0.3743 -3.9998 3.1395 28 1 3.4447 -0.7447 -1.1413 29 1 5.8801 -1.0000 -1.3873 30 1 7.2924 -1.3423 0.5995 31 1 6.2724 -1.4195 2.8382 32 1 3.4478 -2.0484 3.6241 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259749072.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:49:44 Heat of formation + Delta-G solvation = -6.629907 kcal Electronic energy + Delta-G solvation = -15585.049609 eV Core-core repulsion = 13125.127343 eV Total energy + Delta-G solvation = -2459.922265 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.116 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.29679 -36.53554 -35.78554 -32.57501 -30.82836 -29.23414 -27.65203 -26.27331 -23.56388 -22.13010 -21.45898 -19.42061 -17.58353 -17.14649 -15.66625 -15.26460 -14.66161 -14.27003 -13.77400 -13.72240 -13.45277 -13.16069 -12.67780 -12.12667 -11.73141 -11.66052 -11.43042 -11.10658 -10.90534 -10.83817 -10.66603 -10.16011 -10.10389 -9.58015 -9.51178 -8.71122 -8.10599 -7.74459 -7.27764 -6.24798 -4.24145 1.94196 2.07135 3.23112 3.29744 3.34897 4.28422 4.31939 4.84930 5.07753 5.19965 5.49932 5.62746 5.76408 5.92741 6.06372 6.07444 6.23630 6.28925 6.42300 6.45475 6.54919 6.67095 6.76757 6.96251 7.01637 7.19042 7.28638 7.39558 7.56495 8.03687 8.09411 8.40130 8.50492 8.86668 9.37645 10.86430 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.025800 B = 0.013679 C = 0.010959 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1084.995657 B = 2046.437027 C = 2554.429119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 N -0.542 5.542 3 C 0.018 3.982 4 C 0.212 3.788 5 H 0.027 0.973 6 C -0.495 4.495 7 H 0.081 0.919 8 C 0.078 3.922 9 N -0.886 5.886 10 Si 0.870 3.130 11 H -0.263 1.263 12 H -0.270 1.270 13 H -0.292 1.292 14 C -0.054 4.054 15 C -0.094 4.094 16 C -0.139 4.139 17 C -0.132 4.132 18 C -0.152 4.152 19 C 0.100 3.900 20 O -0.500 6.500 21 H 0.013 0.987 22 H 0.043 0.957 23 H 0.083 0.917 24 H 0.062 0.938 25 H 0.053 0.947 26 H 0.010 0.990 27 H 0.267 0.733 28 H 0.133 0.867 29 H 0.113 0.887 30 H 0.112 0.888 31 H 0.116 0.884 32 H 0.389 0.611 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.562 5.982 -1.943 9.090 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 N -0.267 5.267 3 C -0.131 4.131 4 C 0.106 3.894 5 H 0.044 0.956 6 C -0.533 4.533 7 H 0.099 0.901 8 C -0.126 4.126 9 N -0.523 5.523 10 Si 0.698 3.302 11 H -0.188 1.188 12 H -0.195 1.195 13 H -0.219 1.219 14 C -0.056 4.056 15 C -0.112 4.112 16 C -0.158 4.158 17 C -0.151 4.151 18 C -0.171 4.171 19 C 0.055 3.945 20 O -0.311 6.311 21 H 0.031 0.969 22 H 0.061 0.939 23 H 0.102 0.898 24 H 0.081 0.919 25 H 0.072 0.928 26 H 0.029 0.971 27 H 0.077 0.923 28 H 0.150 0.850 29 H 0.131 0.869 30 H 0.131 0.869 31 H 0.134 0.866 32 H 0.245 0.755 Dipole moment (debyes) X Y Z Total from point charges 6.694 6.214 -2.254 9.408 hybrid contribution -0.626 0.410 1.592 1.759 sum 6.067 6.624 -0.663 9.007 Atomic orbital electron populations 1.22138 0.87917 1.02741 0.97889 1.62258 1.07738 1.10661 1.45995 1.22423 1.00621 0.91192 0.98859 1.18677 0.87598 0.94649 0.88453 0.95591 1.20743 1.30006 0.97635 1.04956 0.90099 1.25073 0.95128 0.94888 0.97477 1.69908 1.35758 1.16498 1.30120 0.87022 0.78384 0.82163 0.82662 1.18802 1.19516 1.21866 1.20657 0.96937 0.95963 0.92033 1.21020 0.93805 0.98760 0.97624 1.21083 0.94289 1.02435 0.97945 1.20755 0.98985 1.02981 0.92354 1.21227 0.94434 1.03871 0.97581 1.18325 0.90301 1.01322 0.84542 1.84700 1.81004 1.34701 1.30652 0.96866 0.93864 0.89808 0.91948 0.92783 0.97135 0.92319 0.84953 0.86936 0.86949 0.86600 0.75450 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.86 9.10 60.07 0.55 1.40 16 2 N -0.54 -11.61 3.83 -246.00 -0.94 -12.55 16 3 C 0.02 0.33 9.11 60.06 0.55 0.88 16 4 C 0.21 5.00 1.37 -70.02 -0.10 4.90 16 5 H 0.03 0.66 4.36 -51.93 -0.23 0.44 16 6 C -0.50 -13.19 7.27 -34.44 -0.25 -13.44 16 7 H 0.08 2.41 8.06 -52.49 -0.42 1.99 16 8 C 0.08 2.12 5.47 -17.82 -0.10 2.02 16 9 N -0.89 -25.44 13.96 55.43 0.77 -24.66 16 10 Si 0.87 21.01 26.10 -169.99 -4.44 16.57 16 11 H -0.26 -6.15 6.98 56.52 0.39 -5.76 16 12 H -0.27 -6.54 5.76 56.52 0.33 -6.22 16 13 H -0.29 -7.08 7.11 56.52 0.40 -6.67 16 14 C -0.05 -1.18 4.30 -104.47 -0.45 -1.63 16 15 C -0.09 -1.82 7.91 -39.60 -0.31 -2.13 16 16 C -0.14 -2.32 10.04 -39.56 -0.40 -2.72 16 17 C -0.13 -2.14 10.04 -39.61 -0.40 -2.53 16 18 C -0.15 -2.71 9.99 -39.43 -0.39 -3.10 16 19 C 0.10 2.08 6.68 -39.21 -0.26 1.81 16 20 O -0.50 -10.48 12.02 -19.42 -0.23 -10.71 16 21 H 0.01 0.28 6.67 -51.93 -0.35 -0.07 16 22 H 0.04 0.76 8.05 -51.93 -0.42 0.34 16 23 H 0.08 1.89 7.04 -51.93 -0.37 1.52 16 24 H 0.06 1.12 6.26 -51.93 -0.33 0.79 16 25 H 0.05 0.86 8.07 -51.93 -0.42 0.44 16 26 H 0.01 0.19 8.14 -51.93 -0.42 -0.23 16 27 H 0.27 7.23 8.31 -40.82 -0.34 6.89 16 28 H 0.13 2.55 7.21 -52.49 -0.38 2.17 16 29 H 0.11 1.55 8.06 -52.49 -0.42 1.12 16 30 H 0.11 1.46 8.06 -52.48 -0.42 1.04 16 31 H 0.12 1.80 8.06 -52.49 -0.42 1.37 16 32 H 0.39 7.47 9.06 45.56 0.41 7.88 16 LS Contribution 262.44 15.07 3.95 3.95 Total: -1.00 -29.05 262.44 -5.84 -34.89 By element: Atomic # 1 Polarization: 10.44 SS G_CDS: -3.40 Total: 7.05 kcal Atomic # 6 Polarization: -12.97 SS G_CDS: -1.56 Total: -14.54 kcal Atomic # 7 Polarization: -37.05 SS G_CDS: -0.17 Total: -37.22 kcal Atomic # 8 Polarization: -10.48 SS G_CDS: -0.23 Total: -10.71 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -4.44 Total: 16.57 kcal Total LS contribution 3.95 Total: 3.95 kcal Total: -29.05 -5.84 -34.89 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259749072.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.261 kcal (2) G-P(sol) polarization free energy of solvation -29.046 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.844 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.891 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.630 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds