Wall clock time and date at job start Mon Mar 30 2020 02:30:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.35705 * 126.21930 * 2 1 4 4 N 1.40798 * 126.06943 * 359.97438 * 3 2 1 5 5 C 1.40224 * 107.86071 * 180.02562 * 3 2 1 6 6 N 1.30861 * 108.36709 * 0.02562 * 5 3 2 7 7 N 1.35968 * 126.22445 * 180.02562 * 2 1 3 8 8 C 1.46494 * 126.07136 * 359.97347 * 7 2 1 9 9 H 1.08999 * 109.47401 * 0.02562 * 8 7 2 10 10 C 1.50703 * 109.47080 * 240.00134 * 8 7 2 11 11 H 1.08000 * 120.00005 * 265.11321 * 10 8 7 12 12 C 1.37879 * 119.99865 * 85.11602 * 10 8 7 13 13 N 1.31513 * 120.00197 * 5.07374 * 12 10 8 14 14 Si 1.86791 * 119.99793 * 185.07464 * 12 10 8 15 15 H 1.48497 * 109.47376 * 89.99652 * 14 12 10 16 16 H 1.48507 * 109.47225 * 209.99891 * 14 12 10 17 17 H 1.48506 * 109.47438 * 329.99485 * 14 12 10 18 18 C 1.53002 * 109.47055 * 120.00219 * 8 7 2 19 19 C 1.53000 * 117.49901 * 254.03137 * 18 8 7 20 20 C 1.52999 * 117.49859 * 185.37083 * 18 8 7 21 21 H 1.09005 * 109.47005 * 269.99974 * 1 2 3 22 22 H 1.08995 * 109.47203 * 29.99691 * 1 2 3 23 23 H 1.08998 * 109.47087 * 150.00422 * 1 2 3 24 24 H 0.96997 * 120.00351 * 0.02562 * 4 3 2 25 25 H 0.97006 * 119.99909 * 179.97438 * 4 3 2 26 26 H 1.07999 * 125.81742 * 179.97438 * 5 3 2 27 27 H 0.96991 * 120.00327 * 180.02562 * 13 12 10 28 28 H 1.08996 * 115.55059 * 39.70336 * 18 8 7 29 29 H 1.09006 * 117.49859 * 0.02562 * 19 18 8 30 30 H 1.09004 * 117.50050 * 145.01556 * 19 18 8 31 31 H 1.09000 * 117.50266 * 214.97817 * 20 18 8 32 32 H 1.08997 * 117.49796 * 359.97438 * 20 18 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3089 1.0948 0.0000 4 7 1.8806 2.4361 -0.0005 5 6 3.6398 0.6532 -0.0006 6 7 3.6400 -0.6554 -0.0015 7 7 2.3105 -1.0969 -0.0005 8 6 1.8651 -2.4924 -0.0006 9 1 0.7756 -2.5261 -0.0006 10 6 2.3895 -3.1872 1.2296 11 1 3.3106 -3.7490 1.1812 12 6 1.6934 -3.1056 2.4170 13 7 0.5230 -2.5069 2.4533 14 14 2.4126 -3.8456 3.9740 15 1 3.2345 -2.8254 4.6731 16 1 1.3111 -4.2898 4.8656 17 1 3.2639 -5.0102 3.6212 18 6 2.3966 -3.1974 -1.2501 19 6 1.3991 -3.4956 -2.3713 20 6 1.9355 -4.6346 -1.5005 21 1 -0.3633 0.0000 1.0277 22 1 -0.3633 0.8900 -0.5138 23 1 -0.3633 -0.8900 -0.5138 24 1 0.9328 2.6426 -0.0005 25 1 2.5333 3.1537 -0.0001 26 1 4.5154 1.2853 -0.0011 27 1 0.0335 -2.4492 3.2886 28 1 3.4153 -2.9383 -1.5386 29 1 0.3642 -3.1892 -2.2188 30 1 1.7616 -3.4329 -3.3973 31 1 2.6506 -5.3209 -1.9540 32 1 1.2537 -5.0780 -0.7748 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261144312.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:30:43 Heat of formation + Delta-G solvation = 92.496663 kcal Electronic energy + Delta-G solvation = -15320.240977 eV Core-core repulsion = 12896.909913 eV Total energy + Delta-G solvation = -2423.331064 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.122 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -39.87930 -36.76117 -33.57864 -32.88702 -31.39622 -29.40768 -26.46091 -25.21126 -23.54202 -21.65459 -20.73070 -18.98844 -18.61947 -16.62621 -15.99854 -15.11224 -14.88935 -14.39435 -13.96381 -13.77075 -13.07220 -12.77623 -12.09087 -11.82879 -11.75256 -11.45825 -11.06318 -10.95562 -10.85414 -10.73244 -10.22517 -9.81401 -9.72005 -9.48502 -9.26009 -9.02860 -8.66898 -7.81711 -6.32320 -6.03936 -4.33998 3.18855 3.26086 3.30053 3.34331 3.89571 4.03638 4.27202 4.69183 4.93567 5.20988 5.52004 5.74311 5.80672 5.86320 6.01233 6.16842 6.21395 6.35501 6.44694 6.52002 6.66444 6.75903 6.80414 6.86017 7.09189 7.35988 7.57744 7.70966 8.02216 8.42287 8.60191 8.72732 8.76602 9.15250 9.35180 10.78370 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.020399 B = 0.012923 C = 0.009840 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1372.259498 B = 2166.179469 C = 2844.724155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 C 0.016 3.984 3 C 0.016 3.984 4 N -0.885 5.885 5 C -0.034 4.034 6 N -0.279 5.279 7 N -0.303 5.303 8 C 0.294 3.706 9 H 0.085 0.915 10 C -0.505 4.505 11 H 0.066 0.934 12 C 0.075 3.925 13 N -0.873 5.873 14 Si 0.901 3.099 15 H -0.278 1.278 16 H -0.285 1.285 17 H -0.270 1.270 18 C -0.134 4.134 19 C -0.199 4.199 20 C -0.163 4.163 21 H 0.073 0.927 22 H 0.053 0.947 23 H 0.060 0.940 24 H 0.385 0.615 25 H 0.386 0.614 26 H 0.157 0.843 27 H 0.267 0.733 28 H 0.095 0.905 29 H 0.087 0.913 30 H 0.080 0.920 31 H 0.082 0.918 32 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.071 3.670 -4.999 6.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.116 4.116 3 C -0.092 4.092 4 N -0.434 5.434 5 C -0.218 4.218 6 N -0.105 5.105 7 N -0.090 5.090 8 C 0.198 3.802 9 H 0.103 0.897 10 C -0.544 4.544 11 H 0.084 0.916 12 C -0.132 4.132 13 N -0.508 5.508 14 Si 0.728 3.272 15 H -0.204 1.204 16 H -0.211 1.211 17 H -0.194 1.194 18 C -0.153 4.153 19 C -0.236 4.236 20 C -0.200 4.200 21 H 0.091 0.909 22 H 0.072 0.928 23 H 0.079 0.921 24 H 0.211 0.789 25 H 0.212 0.788 26 H 0.174 0.826 27 H 0.076 0.924 28 H 0.113 0.887 29 H 0.105 0.895 30 H 0.098 0.902 31 H 0.100 0.900 32 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -0.510 2.375 -4.896 5.465 hybrid contribution -0.180 0.907 1.024 1.380 sum -0.690 3.282 -3.872 5.123 Atomic orbital electron populations 1.20014 0.88951 1.00735 1.02477 1.20304 0.93771 0.87284 1.10265 1.17400 0.92113 0.85126 1.14552 1.41298 1.07840 1.02333 1.91894 1.23060 0.95374 0.92992 1.10422 1.77031 1.00929 1.10537 1.22018 1.50356 1.01115 1.06438 1.51127 1.18857 0.96264 0.73673 0.91419 0.89725 1.21136 1.09124 1.30734 0.93401 0.91606 1.25102 0.94347 0.94234 0.99473 1.69888 1.12078 1.41492 1.27380 0.86446 0.78883 0.79540 0.82341 1.20411 1.21071 1.19449 1.22596 0.98280 0.97963 0.96506 1.23024 0.99468 1.05472 0.95682 1.22741 1.03573 0.91403 1.02316 0.90865 0.92815 0.92129 0.78896 0.78830 0.82566 0.92357 0.88660 0.89486 0.90153 0.89971 0.88417 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -1.23 9.78 36.01 0.35 -0.88 16 2 C 0.02 0.36 6.98 -81.66 -0.57 -0.21 16 3 C 0.02 0.32 7.22 -83.90 -0.61 -0.28 16 4 N -0.89 -14.15 9.19 32.30 0.30 -13.85 16 5 C -0.03 -0.73 12.03 -17.22 -0.21 -0.94 16 6 N -0.28 -6.88 12.41 30.70 0.38 -6.49 16 7 N -0.30 -7.45 3.29 -51.48 -0.17 -7.62 16 8 C 0.29 7.22 2.62 -69.08 -0.18 7.04 16 9 H 0.09 2.18 5.91 -51.93 -0.31 1.87 16 10 C -0.50 -13.54 8.35 -34.44 -0.29 -13.83 16 11 H 0.07 1.81 7.81 -52.49 -0.41 1.40 16 12 C 0.07 2.00 5.45 -17.82 -0.10 1.91 16 13 N -0.87 -23.55 12.92 55.43 0.72 -22.83 16 14 Si 0.90 21.17 29.54 -169.99 -5.02 16.15 16 15 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 16 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 17 H -0.27 -6.24 7.11 56.52 0.40 -5.84 16 18 C -0.13 -2.89 5.31 -90.62 -0.48 -3.37 16 19 C -0.20 -3.60 10.18 -26.69 -0.27 -3.88 16 20 C -0.16 -3.04 10.01 -26.69 -0.27 -3.30 16 21 H 0.07 1.51 8.14 -51.93 -0.42 1.09 16 22 H 0.05 0.86 7.61 -51.93 -0.39 0.47 16 23 H 0.06 1.18 7.13 -51.93 -0.37 0.81 16 24 H 0.38 5.50 8.22 -40.82 -0.34 5.16 16 25 H 0.39 5.18 8.96 -40.82 -0.37 4.82 16 26 H 0.16 2.80 8.06 -52.49 -0.42 2.38 16 27 H 0.27 6.90 8.31 -40.82 -0.34 6.56 16 28 H 0.10 2.13 8.14 -51.93 -0.42 1.71 16 29 H 0.09 1.55 8.08 -51.93 -0.42 1.13 16 30 H 0.08 1.30 8.14 -51.93 -0.42 0.87 16 31 H 0.08 1.36 8.14 -51.93 -0.42 0.94 16 32 H 0.10 1.89 8.14 -51.93 -0.42 1.47 16 LS Contribution 277.41 15.07 4.18 4.18 Total: -1.00 -29.34 277.41 -6.51 -35.84 By element: Atomic # 1 Polarization: 16.65 SS G_CDS: -4.27 Total: 12.38 kcal Atomic # 6 Polarization: -15.14 SS G_CDS: -2.62 Total: -17.75 kcal Atomic # 7 Polarization: -52.02 SS G_CDS: 1.22 Total: -50.80 kcal Atomic # 14 Polarization: 21.17 SS G_CDS: -5.02 Total: 16.15 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -29.34 -6.51 -35.84 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261144312.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.340 kcal (2) G-P(sol) polarization free energy of solvation -29.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.844 kcal (6) G-S(sol) free energy of system = (1) + (5) 92.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds