Wall clock time and date at job start Mon Mar 30 2020 02:35:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.48559 * 111.00210 * 2 1 4 4 C 1.54379 * 104.59383 * 200.95968 * 3 2 1 5 5 C 1.54258 * 105.06106 * 23.84851 * 4 3 2 6 6 H 1.09003 * 110.32293 * 119.00016 * 5 4 3 7 7 N 1.46501 * 110.32227 * 241.10220 * 5 4 3 8 8 C 1.34503 * 125.67284 * 83.57588 * 7 5 4 9 9 C 1.39285 * 107.18677 * 179.97438 * 8 7 5 10 10 C 1.41592 * 126.55400 * 179.97438 * 9 8 7 11 11 H 1.08004 * 120.00508 * 0.02562 * 10 9 8 12 12 C 1.39696 * 119.99825 * 180.02562 * 10 9 8 13 13 N 1.31028 * 120.00147 * 0.02562 * 12 10 9 14 14 Si 1.86804 * 120.00240 * 180.02562 * 12 10 9 15 15 H 1.48500 * 109.47124 * 89.99946 * 14 12 10 16 16 H 1.48500 * 109.47129 * 209.99866 * 14 12 10 17 17 H 1.48504 * 109.46677 * 329.99764 * 14 12 10 18 18 C 1.41877 * 106.88715 * 0.02562 * 9 8 7 19 19 N 1.30328 * 108.04677 * 359.97438 * 18 9 8 20 20 C 1.48818 * 110.97553 * 244.57439 * 2 1 3 21 21 H 1.08999 * 109.46889 * 60.13063 * 1 2 3 22 22 H 1.08999 * 109.47150 * 180.12811 * 1 2 3 23 23 H 1.09004 * 109.46960 * 300.13170 * 1 2 3 24 24 H 1.08996 * 110.41840 * 82.18005 * 3 2 1 25 25 H 1.09007 * 110.41072 * 319.73278 * 3 2 1 26 26 H 1.09006 * 110.32522 * 264.95108 * 4 3 2 27 27 H 1.09001 * 110.32738 * 142.74946 * 4 3 2 28 28 H 1.07998 * 126.40572 * 0.25983 * 8 7 5 29 29 H 0.96997 * 120.00734 * 180.02562 * 13 12 10 30 30 H 1.07994 * 125.98270 * 179.97438 * 18 9 8 31 31 H 1.09004 * 110.44786 * 40.32702 * 20 2 1 32 32 H 1.09001 * 110.49886 * 277.80200 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 2.0014 1.3869 0.0000 4 6 3.4432 1.2500 -0.5344 5 6 3.4432 -0.0541 -1.3584 6 1 3.6954 0.1550 -2.3980 7 7 4.3909 -1.0155 -0.7893 8 6 4.1414 -1.8498 0.2358 9 6 5.3016 -2.5880 0.4574 10 6 5.4903 -3.5866 1.4433 11 1 4.6847 -3.8398 2.1167 12 6 6.7185 -4.2444 1.5450 13 7 7.6960 -3.9369 0.7284 14 14 6.9674 -5.5624 2.8452 15 1 6.5865 -6.8853 2.2882 16 1 8.3944 -5.5902 3.2550 17 1 6.1190 -5.2594 4.0258 18 6 6.2584 -2.1471 -0.4929 19 7 5.7055 -1.2188 -1.2216 20 6 2.0017 -0.5966 -1.2550 21 1 -0.3633 0.5118 -0.8912 22 1 -0.3633 -1.0276 0.0023 23 1 -0.3633 0.5159 0.8888 24 1 2.0079 1.7917 1.0120 25 1 1.4099 2.0212 -0.6603 26 1 4.1484 1.1748 0.2935 27 1 3.6938 2.0994 -1.1699 28 1 3.2134 -1.9350 0.7817 29 1 8.5487 -4.3938 0.7987 30 1 7.2682 -2.5161 -0.5946 31 1 1.4109 -0.2720 -2.1116 32 1 2.0089 -1.6845 -1.1874 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000257828941.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:35:30 Heat of formation + Delta-G solvation = 83.513109 kcal Electronic energy + Delta-G solvation = -14977.871936 eV Core-core repulsion = 12554.151316 eV Total energy + Delta-G solvation = -2423.720620 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.122 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.64501 -38.01712 -33.53452 -32.37605 -29.82354 -28.84045 -27.58871 -25.62314 -24.30799 -21.21789 -21.00525 -19.42548 -18.49833 -17.20138 -15.77252 -15.48623 -14.78294 -14.56176 -14.11941 -13.36224 -12.96841 -12.94830 -12.56129 -12.07028 -11.73315 -11.43661 -11.35772 -11.10835 -11.02327 -10.92021 -10.86724 -10.64144 -10.25818 -9.89005 -9.12357 -8.69645 -8.45270 -7.65827 -7.02207 -6.30461 -3.85731 3.13761 3.26955 3.31523 3.54328 3.91521 4.07183 4.23790 4.53227 4.70282 4.90318 5.20379 5.31951 5.36028 5.47513 5.57003 5.71066 5.73833 5.81688 5.86796 5.94572 6.11251 6.38436 6.70958 6.84055 7.01696 7.05027 7.47361 7.68220 7.82192 8.28119 8.70349 8.78795 9.20737 9.30602 9.65614 10.69677 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.042847 B = 0.007245 C = 0.006538 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 653.335522 B = 3863.777866 C = 4281.880296 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 N -0.509 5.509 3 C 0.034 3.966 4 C -0.138 4.138 5 C 0.176 3.824 6 H 0.090 0.910 7 N -0.385 5.385 8 C -0.098 4.098 9 C -0.031 4.031 10 C -0.435 4.435 11 H 0.066 0.934 12 C 0.065 3.935 13 N -0.848 5.848 14 Si 0.912 3.088 15 H -0.276 1.276 16 H -0.282 1.282 17 H -0.268 1.268 18 C 0.032 3.968 19 N -0.350 5.350 20 C 0.025 3.975 21 H 0.025 0.975 22 H 0.069 0.931 23 H 0.067 0.933 24 H 0.081 0.919 25 H 0.041 0.959 26 H 0.083 0.917 27 H 0.072 0.928 28 H 0.146 0.854 29 H 0.271 0.729 30 H 0.201 0.799 31 H 0.053 0.947 32 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.022 7.077 -2.127 12.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 N -0.233 5.233 3 C -0.094 4.094 4 C -0.177 4.177 5 C 0.070 3.930 6 H 0.108 0.892 7 N -0.173 5.173 8 C -0.239 4.239 9 C -0.041 4.041 10 C -0.470 4.470 11 H 0.085 0.915 12 C -0.145 4.145 13 N -0.480 5.480 14 Si 0.739 3.261 15 H -0.201 1.201 16 H -0.208 1.208 17 H -0.193 1.193 18 C -0.155 4.155 19 N -0.172 5.172 20 C -0.104 4.104 21 H 0.043 0.957 22 H 0.088 0.912 23 H 0.086 0.914 24 H 0.099 0.901 25 H 0.060 0.940 26 H 0.102 0.898 27 H 0.091 0.909 28 H 0.163 0.837 29 H 0.082 0.918 30 H 0.217 0.783 31 H 0.071 0.929 32 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -9.565 7.559 -2.646 12.475 hybrid contribution -0.382 -0.734 0.646 1.050 sum -9.947 6.825 -2.000 12.228 Atomic orbital electron populations 1.22500 0.88208 1.02241 1.00429 1.65443 1.07809 1.15198 1.34878 1.23120 0.95115 0.90009 1.01127 1.22859 0.96807 0.97252 1.00773 1.21329 0.86902 0.87629 0.97127 0.89230 1.47430 1.09559 1.31951 1.28391 1.22266 1.00908 1.01625 0.99051 1.18227 0.90591 0.97686 0.97547 1.18712 0.97577 1.16663 1.14076 0.91530 1.25600 0.95481 0.97243 0.96129 1.69456 1.03728 1.39440 1.35422 0.86257 0.77641 0.81004 0.81234 1.20134 1.20760 1.19262 1.25073 1.01539 0.94304 0.94556 1.76560 0.91294 1.23188 1.26109 1.23539 0.94019 1.01917 0.90916 0.95669 0.91176 0.91373 0.90072 0.94029 0.89810 0.90929 0.83683 0.91817 0.78292 0.92916 0.88655 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.17 9.53 60.06 0.57 0.74 16 2 N -0.51 -7.38 5.54 -238.01 -1.32 -8.70 16 3 C 0.03 0.45 6.49 -2.18 -0.01 0.43 16 4 C -0.14 -2.10 6.79 -25.35 -0.17 -2.28 16 5 C 0.18 3.09 4.14 -66.55 -0.28 2.81 16 6 H 0.09 1.48 8.14 -51.93 -0.42 1.06 16 7 N -0.39 -8.91 3.45 -52.57 -0.18 -9.09 16 8 C -0.10 -2.46 10.29 -15.99 -0.16 -2.62 16 9 C -0.03 -0.87 5.93 -106.84 -0.63 -1.50 16 10 C -0.44 -12.34 9.40 -37.76 -0.35 -12.69 16 11 H 0.07 1.82 7.84 -52.48 -0.41 1.41 16 12 C 0.06 1.74 5.49 -17.35 -0.10 1.64 16 13 N -0.85 -23.24 10.32 55.54 0.57 -22.66 16 14 Si 0.91 20.33 29.56 -169.99 -5.02 15.31 16 15 H -0.28 -6.06 7.11 56.52 0.40 -5.66 16 16 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 17 H -0.27 -5.91 7.11 56.52 0.40 -5.51 16 18 C 0.03 0.89 10.91 -16.80 -0.18 0.71 16 19 N -0.35 -9.12 12.47 30.97 0.39 -8.73 16 20 C 0.02 0.38 5.48 -2.04 -0.01 0.37 16 21 H 0.02 0.25 7.98 -51.93 -0.41 -0.17 16 22 H 0.07 0.77 8.14 -51.93 -0.42 0.34 16 23 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 24 H 0.08 1.02 8.14 -51.93 -0.42 0.60 16 25 H 0.04 0.46 7.97 -51.92 -0.41 0.04 16 26 H 0.08 1.52 7.95 -51.93 -0.41 1.11 16 27 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 28 H 0.15 3.45 7.66 -52.49 -0.40 3.04 16 29 H 0.27 6.86 8.30 -40.82 -0.34 6.52 16 30 H 0.20 5.69 5.77 -52.49 -0.30 5.39 16 31 H 0.05 0.66 7.91 -51.93 -0.41 0.25 16 32 H 0.10 1.63 7.35 -51.93 -0.38 1.24 16 LS Contribution 266.55 15.07 4.02 4.02 Total: -1.00 -30.27 266.55 -7.28 -37.55 By element: Atomic # 1 Polarization: 9.09 SS G_CDS: -4.40 Total: 4.70 kcal Atomic # 6 Polarization: -11.05 SS G_CDS: -1.33 Total: -12.38 kcal Atomic # 7 Polarization: -48.64 SS G_CDS: -0.54 Total: -49.18 kcal Atomic # 14 Polarization: 20.33 SS G_CDS: -5.02 Total: 15.31 kcal Total LS contribution 4.02 Total: 4.02 kcal Total: -30.27 -7.28 -37.55 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000257828941.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.060 kcal (2) G-P(sol) polarization free energy of solvation -30.268 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 90.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.547 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.513 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds