Wall clock time and date at job start Mon Mar 30 2020 02:33:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.40283 * 126.16005 * 2 1 4 4 C 1.30528 * 109.10314 * 179.97438 * 3 2 1 5 5 C 1.39525 * 108.86892 * 0.11322 * 4 3 2 6 6 C 1.37767 * 126.16569 * 179.97438 * 2 1 3 7 7 C 1.40237 * 126.75920 * 359.96197 * 6 2 1 8 8 H 1.07993 * 119.99939 * 218.24608 * 7 6 2 9 9 C 1.40163 * 119.99658 * 38.24913 * 7 6 2 10 10 N 1.30767 * 120.00377 * 18.72973 * 9 7 6 11 11 Si 1.86804 * 119.99784 * 198.73133 * 9 7 6 12 12 H 1.48493 * 109.47400 * 59.99830 * 11 9 7 13 13 H 1.48506 * 109.47020 * 180.02562 * 11 9 7 14 14 H 1.48499 * 109.47104 * 299.99544 * 11 9 7 15 15 C 1.50718 * 123.04478 * 179.66377 * 5 4 3 16 16 C 1.53555 * 107.73824 * 344.29658 * 15 5 4 17 17 N 1.46876 * 109.70182 * 49.47250 * 16 15 5 18 18 C 1.46906 * 111.00074 * 51.79528 * 17 16 15 19 19 C 1.47263 * 111.71921 * 287.31166 * 17 16 15 20 20 H 1.09001 * 109.47089 * 90.98188 * 1 2 3 21 21 H 1.09005 * 109.46881 * 210.97693 * 1 2 3 22 22 H 1.08997 * 109.47474 * 330.97626 * 1 2 3 23 23 H 0.97002 * 119.99869 * 174.70319 * 10 9 7 24 24 H 1.08998 * 109.75175 * 224.74581 * 15 5 4 25 25 H 1.09010 * 109.82003 * 103.87977 * 15 5 4 26 26 H 1.09005 * 109.42153 * 289.41667 * 16 15 5 27 27 H 1.09004 * 109.42764 * 169.53525 * 16 15 5 28 28 H 1.08998 * 109.46714 * 59.99543 * 18 17 16 29 29 H 1.08997 * 109.46787 * 179.97438 * 18 17 16 30 30 H 1.09001 * 109.46350 * 299.99723 * 18 17 16 31 31 H 1.09004 * 109.73120 * 171.78259 * 19 17 16 32 32 H 1.09003 * 109.73357 * 292.46603 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2927 1.1326 0.0000 4 6 3.5406 0.7497 0.0006 5 6 3.5847 -0.6448 -0.0017 6 6 2.2780 -1.1122 0.0005 7 6 1.8662 -2.4528 0.0018 8 1 2.4101 -3.1841 0.5811 9 6 0.7488 -2.8433 -0.7487 10 7 0.3125 -2.0807 -1.7172 11 14 -0.1174 -4.4534 -0.3655 12 1 -0.6160 -4.4266 1.0330 13 1 -1.2606 -4.6342 -1.2959 14 1 0.8364 -5.5798 -0.5294 15 6 4.8734 -1.4263 -0.0091 16 6 6.0016 -0.4644 -0.4092 17 7 5.9223 0.7568 0.4031 18 6 5.8601 0.4337 1.8348 19 6 4.7863 1.6043 0.0034 20 1 -0.3633 -0.0176 -1.0275 21 1 -0.3633 -0.8811 0.5290 22 1 -0.3634 0.8986 0.4986 23 1 -0.4117 -2.3856 -2.2859 24 1 4.8071 -2.2393 -0.7322 25 1 5.0668 -1.8297 0.9849 26 1 5.9007 -0.2059 -1.4633 27 1 6.9650 -0.9472 -0.2450 28 1 6.7545 -0.1195 2.1216 29 1 5.8025 1.3558 2.4131 30 1 4.9776 -0.1750 2.0318 31 1 4.6696 2.4225 0.7141 32 1 4.9598 2.0055 -0.9952 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261073226.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:33:29 Heat of formation + Delta-G solvation = 68.501902 kcal Electronic energy + Delta-G solvation = -15537.479194 eV Core-core repulsion = 13113.107640 eV Total energy + Delta-G solvation = -2424.371555 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.122 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.70635 -37.05842 -33.76458 -31.29091 -30.99757 -28.54249 -27.42835 -25.73637 -24.67914 -22.34254 -20.76038 -19.65733 -17.54115 -16.83155 -15.23958 -14.84309 -14.45882 -14.35510 -14.10542 -13.56321 -12.75818 -12.60766 -12.44739 -11.77710 -11.68509 -11.49221 -11.36601 -11.22272 -11.11471 -10.88940 -10.77606 -10.43040 -10.17741 -10.11738 -9.17444 -8.85433 -7.76550 -7.54816 -6.84015 -6.73593 -4.59260 2.90024 3.01533 3.04766 3.58203 3.86955 4.06150 4.18082 4.62747 4.97632 5.56236 5.74209 5.84288 5.99397 6.09393 6.16787 6.26518 6.30346 6.34938 6.43000 6.47495 6.71077 6.78186 6.87361 7.11343 7.11711 7.29315 7.47805 7.62419 7.70091 7.89347 8.29766 8.40900 8.69608 9.09990 9.50424 10.14302 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.038744 B = 0.009896 C = 0.008575 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 722.519169 B = 2828.884271 C = 3264.442074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.143 3.857 2 N -0.395 5.395 3 N -0.366 5.366 4 C 0.042 3.958 5 C -0.364 4.364 6 C 0.298 3.702 7 C -0.474 4.474 8 H 0.091 0.909 9 C 0.080 3.920 10 N -0.808 5.808 11 Si 0.909 3.091 12 H -0.265 1.265 13 H -0.279 1.279 14 H -0.264 1.264 15 C -0.040 4.040 16 C 0.059 3.941 17 N -0.533 5.533 18 C 0.021 3.979 19 C 0.143 3.857 20 H 0.068 0.932 21 H 0.064 0.936 22 H 0.046 0.954 23 H 0.282 0.718 24 H 0.056 0.944 25 H 0.042 0.958 26 H 0.068 0.932 27 H 0.065 0.935 28 H 0.058 0.942 29 H 0.056 0.944 30 H 0.045 0.955 31 H 0.075 0.925 32 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.552 0.190 2.625 4.421 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 N -0.180 5.180 3 N -0.188 5.188 4 C -0.124 4.124 5 C -0.377 4.377 6 C 0.176 3.824 7 C -0.510 4.510 8 H 0.109 0.891 9 C -0.138 4.138 10 N -0.437 5.437 11 Si 0.733 3.267 12 H -0.189 1.189 13 H -0.204 1.204 14 H -0.189 1.189 15 C -0.079 4.079 16 C -0.069 4.069 17 N -0.255 5.255 18 C -0.127 4.127 19 C 0.013 3.987 20 H 0.086 0.914 21 H 0.082 0.918 22 H 0.065 0.935 23 H 0.093 0.907 24 H 0.074 0.926 25 H 0.060 0.940 26 H 0.086 0.914 27 H 0.083 0.917 28 H 0.077 0.923 29 H 0.075 0.925 30 H 0.064 0.936 31 H 0.094 0.906 32 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 2.872 1.569 2.414 4.067 hybrid contribution -0.975 -2.033 0.082 2.256 sum 1.896 -0.464 2.497 3.169 Atomic orbital electron populations 1.21333 0.76818 0.99839 1.02051 1.48728 1.04528 1.03070 1.61679 1.76504 1.00719 1.09830 1.31794 1.22273 0.93536 0.94869 1.01723 1.19532 0.93502 0.92089 1.32555 1.17950 0.87382 0.87684 0.89363 1.18571 1.11455 0.92054 1.28920 0.89088 1.25851 0.95520 0.98742 0.93668 1.69774 1.24165 1.37132 1.12611 0.86350 0.79128 0.81847 0.79347 1.18933 1.20384 1.18888 1.20017 0.91919 0.96708 0.99294 1.22158 0.97554 0.89780 0.97442 1.62514 1.40288 1.18478 1.04255 1.22354 1.01061 1.00596 0.88737 1.20498 0.83789 0.93512 1.00944 0.91397 0.91779 0.93500 0.90686 0.92592 0.93999 0.91392 0.91677 0.92309 0.92516 0.93634 0.90634 0.90210 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.14 3.30 9.59 59.85 0.57 3.87 16 2 N -0.40 -10.51 4.05 -65.58 -0.27 -10.77 16 3 N -0.37 -9.62 12.52 33.65 0.42 -9.19 16 4 C 0.04 1.01 6.67 -82.49 -0.55 0.46 16 5 C -0.36 -9.13 5.27 -103.93 -0.55 -9.68 16 6 C 0.30 8.07 6.15 -84.25 -0.52 7.55 16 7 C -0.47 -12.39 8.97 -38.11 -0.34 -12.73 16 8 H 0.09 2.31 7.92 -52.49 -0.42 1.89 16 9 C 0.08 1.95 4.22 -17.28 -0.07 1.88 16 10 N -0.81 -20.39 10.55 55.56 0.59 -19.80 16 11 Si 0.91 18.24 29.61 -169.99 -5.03 13.21 16 12 H -0.26 -5.27 7.11 56.52 0.40 -4.87 16 13 H -0.28 -5.47 7.11 56.52 0.40 -5.07 16 14 H -0.26 -5.28 7.11 56.52 0.40 -4.87 16 15 C -0.04 -0.84 5.56 -27.59 -0.15 -0.99 16 16 C 0.06 1.06 5.97 -3.55 -0.02 1.04 16 17 N -0.53 -9.57 5.18 -243.48 -1.26 -10.83 16 18 C 0.02 0.35 8.82 60.07 0.53 0.88 16 19 C 0.14 2.78 6.18 -4.60 -0.03 2.76 16 20 H 0.07 1.60 6.94 -51.93 -0.36 1.24 16 21 H 0.06 1.45 7.15 -51.93 -0.37 1.07 16 22 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 23 H 0.28 6.53 8.30 -40.82 -0.34 6.19 16 24 H 0.06 1.20 8.14 -51.93 -0.42 0.78 16 25 H 0.04 0.85 7.01 -51.92 -0.36 0.49 16 26 H 0.07 1.25 8.06 -51.93 -0.42 0.83 16 27 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 28 H 0.06 0.85 8.14 -51.93 -0.42 0.43 16 29 H 0.06 0.87 8.02 -51.93 -0.42 0.45 16 30 H 0.05 0.88 5.59 -51.93 -0.29 0.59 16 31 H 0.08 1.37 7.97 -51.93 -0.41 0.96 16 32 H 0.08 1.48 8.14 -51.93 -0.42 1.06 16 LS Contribution 258.28 15.07 3.89 3.89 Total: -1.00 -29.07 258.28 -7.09 -36.16 By element: Atomic # 1 Polarization: 6.60 SS G_CDS: -4.30 Total: 2.30 kcal Atomic # 6 Polarization: -3.84 SS G_CDS: -1.13 Total: -4.97 kcal Atomic # 7 Polarization: -50.08 SS G_CDS: -0.52 Total: -50.60 kcal Atomic # 14 Polarization: 18.24 SS G_CDS: -5.03 Total: 13.21 kcal Total LS contribution 3.89 Total: 3.89 kcal Total: -29.07 -7.09 -36.16 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261073226.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.657 kcal (2) G-P(sol) polarization free energy of solvation -29.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.155 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.502 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds