Wall clock time and date at job start Mon Mar 30 2020 02:30:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46500 * 109.47120 * 2 1 4 4 N 1.29069 * 124.57654 * 269.70050 * 3 2 1 5 5 C 1.30236 * 108.41032 * 180.30523 * 4 3 2 6 6 C 1.40023 * 106.16496 * 359.90808 * 5 4 3 7 7 N 1.29074 * 124.57544 * 90.00245 * 3 2 1 8 8 C 1.50536 * 123.74518 * 180.30958 * 6 5 4 9 9 H 1.09005 * 109.72370 * 256.77220 * 8 6 5 10 10 C 1.50696 * 109.72969 * 136.09841 * 8 6 5 11 11 H 1.07993 * 119.99851 * 239.99793 * 10 8 6 12 12 C 1.37882 * 120.00014 * 59.99992 * 10 8 6 13 13 N 1.31510 * 119.99798 * 0.02562 * 12 10 8 14 14 Si 1.86797 * 119.99751 * 179.97438 * 12 10 8 15 15 H 1.48505 * 109.46878 * 90.00301 * 14 12 10 16 16 H 1.48503 * 109.46952 * 209.99606 * 14 12 10 17 17 H 1.48494 * 109.47408 * 330.00071 * 14 12 10 18 18 C 1.53466 * 108.14514 * 16.43772 * 8 6 5 19 19 C 1.53032 * 109.80238 * 309.68127 * 18 8 6 20 20 C 1.50531 * 130.08787 * 179.80890 * 5 4 3 21 21 H 1.09005 * 109.47052 * 300.00088 * 1 2 3 22 22 H 1.08994 * 109.47229 * 59.99566 * 1 2 3 23 23 H 1.09002 * 109.47446 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.46612 * 240.00070 * 2 1 3 25 25 H 1.08998 * 109.47238 * 119.99948 * 2 1 3 26 26 H 0.97000 * 120.00040 * 179.97438 * 13 12 10 27 27 H 1.09001 * 109.41919 * 189.57909 * 18 8 6 28 28 H 1.09003 * 109.36619 * 69.74673 * 18 8 6 29 29 H 1.09005 * 109.41409 * 311.24867 * 19 18 8 30 30 H 1.09001 * 109.41745 * 191.44807 * 19 18 8 31 31 H 1.08997 * 109.72782 * 316.22089 * 20 5 4 32 32 H 1.09000 * 109.72451 * 76.84706 * 20 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 7 2.2678 2.0700 -1.0627 5 6 2.6891 3.2477 -0.7001 6 6 2.6842 3.2494 0.7002 7 7 2.2626 2.0718 1.0628 8 6 3.0978 4.4308 1.5364 9 1 4.0967 4.2644 1.9397 10 6 2.1181 4.6231 2.6652 11 1 1.5677 5.5483 2.7508 12 6 1.9243 3.6177 3.5886 13 7 2.5949 2.4912 3.4846 14 14 0.7104 3.8563 4.9882 15 1 -0.6328 3.3860 4.5640 16 1 1.1577 3.0759 6.1698 17 1 0.6413 5.2965 5.3434 18 6 3.1026 5.6745 0.6373 19 6 3.9005 5.3898 -0.6371 20 6 3.1169 4.4241 -1.5363 21 1 -0.3633 0.5139 0.8900 22 1 -0.3633 0.5139 -0.8899 23 1 -0.3634 -1.0277 0.0005 24 1 1.8933 -0.5138 -0.8900 25 1 1.8934 -0.5138 0.8900 26 1 2.4589 1.7840 4.1345 27 1 3.5596 6.5069 1.1725 28 1 2.0774 5.9332 0.3726 29 1 4.8584 4.9419 -0.3724 30 1 4.0737 6.3234 -1.1724 31 1 3.7533 4.0830 -2.3528 32 1 2.2383 4.9272 -1.9401 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261174079.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:30:20 Heat of formation + Delta-G solvation = 99.599815 kcal Electronic energy + Delta-G solvation = -15542.413241 eV Core-core repulsion = 13119.390193 eV Total energy + Delta-G solvation = -2423.023048 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.122 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.28186 -36.46065 -33.49160 -33.05057 -31.10970 -29.03751 -28.81554 -25.24230 -23.79828 -21.64978 -21.45489 -19.55339 -18.62490 -16.28738 -16.06368 -15.23219 -14.44207 -14.30363 -13.89208 -13.66939 -12.92115 -12.54758 -12.34883 -12.03912 -11.62701 -11.29688 -11.15673 -11.02251 -10.82661 -10.69178 -10.35543 -10.17477 -9.73492 -9.53362 -9.36625 -8.82328 -8.59902 -8.23716 -7.56180 -5.83716 -3.91617 3.05445 3.36421 3.39192 3.42649 3.45775 3.95317 4.53897 4.95855 5.33249 5.36072 5.47545 5.52851 5.63097 5.71698 5.80558 5.95169 6.06093 6.29296 6.34522 6.38002 6.44106 6.52609 6.72386 6.79236 6.98859 7.12084 7.62706 7.68977 7.76065 7.95106 8.14887 8.44084 9.05775 9.70889 9.82637 11.20209 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.020731 B = 0.014729 C = 0.009355 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1350.291998 B = 1900.525175 C = 2992.413214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.151 3.849 3 N -0.209 5.209 4 N -0.320 5.320 5 C -0.032 4.032 6 C 0.056 3.944 7 N -0.203 5.203 8 C 0.124 3.876 9 H 0.041 0.959 10 C -0.531 4.531 11 H 0.057 0.943 12 C 0.072 3.928 13 N -0.839 5.839 14 Si 0.884 3.116 15 H -0.285 1.285 16 H -0.288 1.288 17 H -0.275 1.275 18 C -0.107 4.107 19 C -0.117 4.117 20 C -0.016 4.016 21 H 0.066 0.934 22 H 0.059 0.941 23 H 0.072 0.928 24 H 0.089 0.911 25 H 0.097 0.903 26 H 0.257 0.743 27 H 0.057 0.943 28 H 0.054 0.946 29 H 0.060 0.940 30 H 0.058 0.942 31 H 0.065 0.935 32 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.432 -1.427 -7.202 7.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C 0.029 3.971 3 N -0.108 5.108 4 N -0.159 5.159 5 C -0.199 4.199 6 C -0.113 4.113 7 N -0.038 5.038 8 C 0.104 3.896 9 H 0.059 0.941 10 C -0.569 4.569 11 H 0.075 0.925 12 C -0.134 4.134 13 N -0.474 5.474 14 Si 0.712 3.288 15 H -0.211 1.211 16 H -0.214 1.214 17 H -0.200 1.200 18 C -0.145 4.145 19 C -0.155 4.155 20 C -0.056 4.056 21 H 0.085 0.915 22 H 0.078 0.922 23 H 0.091 0.909 24 H 0.107 0.893 25 H 0.116 0.884 26 H 0.067 0.933 27 H 0.076 0.924 28 H 0.073 0.927 29 H 0.079 0.921 30 H 0.077 0.923 31 H 0.084 0.916 32 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -0.880 -3.010 -7.101 7.763 hybrid contribution -0.577 0.625 0.777 1.152 sum -1.456 -2.385 -6.324 6.914 Atomic orbital electron populations 1.22142 0.94675 1.02391 1.03323 1.21447 0.94883 0.76795 1.03928 1.48752 1.48802 1.12986 1.00241 1.73271 1.19314 1.05838 1.17489 1.22869 1.07115 0.94239 0.95641 1.23934 1.00949 0.94870 0.91502 1.74727 1.14034 1.05329 1.09760 1.17258 0.97281 0.84394 0.90655 0.94077 1.20904 1.24915 1.01644 1.09479 0.92456 1.24934 0.95838 0.95181 0.97454 1.70001 1.39421 1.04253 1.33726 0.86734 0.81709 0.78055 0.82253 1.21093 1.21383 1.19975 1.21658 0.99099 0.99150 0.94598 1.21639 0.99172 0.97739 0.96968 1.19732 0.99224 0.90896 0.95739 0.91488 0.92169 0.90916 0.89293 0.88446 0.93329 0.92386 0.92738 0.92129 0.92331 0.91597 0.91243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.50 10.24 37.16 0.38 -2.12 16 2 C 0.15 2.55 7.26 -4.04 -0.03 2.52 16 3 N -0.21 -4.75 3.97 -10.70 -0.04 -4.80 16 4 N -0.32 -7.24 12.04 33.55 0.40 -6.83 16 5 C -0.03 -0.74 7.20 -82.72 -0.60 -1.33 16 6 C 0.06 1.43 6.25 -82.72 -0.52 0.92 16 7 N -0.20 -5.36 9.30 33.55 0.31 -5.05 16 8 C 0.12 3.17 2.49 -92.76 -0.23 2.94 16 9 H 0.04 1.12 8.14 -51.93 -0.42 0.70 16 10 C -0.53 -14.77 8.55 -34.44 -0.29 -15.06 16 11 H 0.06 1.57 7.75 -52.49 -0.41 1.16 16 12 C 0.07 2.02 5.15 -17.82 -0.09 1.93 16 13 N -0.84 -24.28 10.66 55.43 0.59 -23.69 16 14 Si 0.88 21.67 29.54 -169.99 -5.02 16.65 16 15 H -0.28 -7.04 7.11 56.52 0.40 -6.64 16 16 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 17 H -0.27 -6.61 7.11 56.52 0.40 -6.21 16 18 C -0.11 -2.18 5.13 -26.47 -0.14 -2.31 16 19 C -0.12 -2.00 5.87 -26.47 -0.16 -2.15 16 20 C -0.02 -0.29 6.31 -27.72 -0.17 -0.47 16 21 H 0.07 1.16 8.14 -51.93 -0.42 0.74 16 22 H 0.06 0.92 8.14 -51.93 -0.42 0.50 16 23 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 24 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 25 H 0.10 1.58 8.14 -51.93 -0.42 1.16 16 26 H 0.26 7.15 8.31 -40.82 -0.34 6.81 16 27 H 0.06 1.09 8.14 -51.93 -0.42 0.67 16 28 H 0.05 1.12 8.08 -51.93 -0.42 0.70 16 29 H 0.06 1.05 8.11 -51.93 -0.42 0.63 16 30 H 0.06 0.81 8.14 -51.93 -0.42 0.39 16 31 H 0.07 1.04 8.14 -51.93 -0.42 0.62 16 32 H 0.07 1.15 8.14 -51.93 -0.42 0.73 16 LS Contribution 264.94 15.07 3.99 3.99 Total: -1.00 -32.04 264.94 -6.22 -38.25 By element: Atomic # 1 Polarization: 1.23 SS G_CDS: -4.61 Total: -3.38 kcal Atomic # 6 Polarization: -13.30 SS G_CDS: -1.85 Total: -15.15 kcal Atomic # 7 Polarization: -41.64 SS G_CDS: 1.26 Total: -40.37 kcal Atomic # 14 Polarization: 21.67 SS G_CDS: -5.02 Total: 16.65 kcal Total LS contribution 3.99 Total: 3.99 kcal Total: -32.04 -6.22 -38.25 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261174079.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.854 kcal (2) G-P(sol) polarization free energy of solvation -32.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 105.819 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.255 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds