Wall clock time and date at job start Mon Mar 30 2020 03:04:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39167 * 110.99688 * 236.04838 * 2 1 3 5 5 C 1.39498 * 120.86929 * 60.00178 * 4 2 1 6 6 C 1.37874 * 119.06845 * 180.02562 * 5 4 2 7 7 N 1.32006 * 120.84644 * 0.02562 * 6 5 4 8 8 C 1.31987 * 121.91031 * 359.97438 * 7 6 5 9 9 C 1.37918 * 120.84048 * 359.72020 * 8 7 6 10 10 C 1.50698 * 120.46611 * 180.28157 * 9 8 7 11 11 H 1.08997 * 109.47368 * 220.29238 * 10 9 8 12 12 N 1.46896 * 109.47167 * 340.29592 * 10 9 8 13 13 C 1.50701 * 109.46935 * 100.29561 * 10 9 8 14 14 H 1.08009 * 119.99975 * 359.97438 * 13 10 9 15 15 C 1.37879 * 120.00393 * 179.97438 * 13 10 9 16 16 N 1.31512 * 119.99626 * 0.02562 * 15 13 10 17 17 Si 1.86797 * 120.00277 * 179.97438 * 15 13 10 18 18 H 1.48500 * 109.47317 * 60.00084 * 17 15 13 19 19 H 1.48492 * 109.47181 * 180.02562 * 17 15 13 20 20 H 1.48505 * 109.46965 * 300.00167 * 17 15 13 21 21 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 22 22 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 23 23 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 24 24 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 25 25 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 26 26 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 27 27 H 1.07999 * 120.46253 * 359.97438 * 5 4 2 28 28 H 1.07996 * 119.57685 * 180.02562 * 6 5 4 29 29 H 1.07998 * 119.57661 * 179.97438 * 8 7 6 30 30 H 1.00898 * 111.00090 * 296.03942 * 12 10 9 31 31 H 1.00900 * 111.00191 * 60.00016 * 12 10 9 32 32 H 0.96998 * 119.99945 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9677 -0.7256 -1.0777 5 6 1.6652 -0.3584 -2.3891 6 6 2.1788 -1.1041 -3.4289 7 7 2.9463 -2.1524 -3.1955 8 6 3.2553 -2.5318 -1.9697 9 6 2.7870 -1.8358 -0.8750 10 6 3.1502 -2.2728 0.5208 11 1 2.2801 -2.1754 1.1700 12 7 3.5888 -3.6745 0.4965 13 6 4.2666 -1.4061 1.0439 14 1 4.6728 -0.6180 0.4271 15 6 4.7696 -1.6192 2.3099 16 7 4.2753 -2.5791 3.0607 17 14 6.1539 -0.5454 2.9579 18 1 5.7113 0.8719 2.9817 19 1 6.5117 -0.9758 4.3333 20 1 7.3395 -0.6790 2.0737 21 1 -0.3634 -1.0252 0.0708 22 1 -0.3633 0.4513 -0.9233 23 1 -0.3633 0.5740 0.8525 24 1 1.6461 1.8947 0.8901 25 1 3.0851 1.3422 0.0005 26 1 1.6460 1.8948 -0.8900 27 1 1.0369 0.4974 -2.5870 28 1 1.9502 -0.8269 -4.4474 29 1 3.8861 -3.3959 -1.8222 30 1 2.8370 -4.2837 0.2107 31 1 4.3949 -3.7910 -0.0990 32 1 4.6289 -2.7288 3.9515 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000261289775.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:04:15 Heat of formation + Delta-G solvation = 55.843101 kcal Electronic energy + Delta-G solvation = -15357.804903 eV Core-core repulsion = 12932.884422 eV Total energy + Delta-G solvation = -2424.920481 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 221.122 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.04598 -36.79204 -34.83048 -31.70297 -30.51460 -29.35508 -27.28407 -26.06401 -24.58748 -23.35454 -20.96188 -20.27034 -16.81213 -16.39998 -16.11124 -14.88073 -14.66616 -14.22262 -14.10947 -13.99029 -13.64486 -13.05445 -13.02095 -12.25338 -12.07041 -11.73450 -11.45119 -11.34233 -11.16865 -10.76629 -10.68622 -9.95921 -9.37623 -8.97176 -8.91601 -8.38042 -8.06856 -8.04503 -7.07149 -5.79974 -3.92254 1.62916 1.83387 3.38041 3.42985 3.45267 4.21927 4.31792 4.56158 4.92145 5.25142 5.36185 5.46382 5.50218 5.56562 5.71306 5.80780 5.84000 6.02212 6.07023 6.23757 6.27725 6.36246 6.48674 6.80475 7.19350 7.28262 7.56804 7.79312 7.95282 8.29517 8.48716 8.67492 9.01922 9.19370 9.73440 11.24808 Molecular weight = 221.12amu Principal moments of inertia in cm(-1) A = 0.026751 B = 0.010995 C = 0.009432 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1046.446608 B = 2546.103210 C = 2967.996933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.488 5.488 3 C 0.039 3.961 4 C 0.130 3.870 5 C -0.208 4.208 6 C 0.072 3.928 7 N -0.490 5.490 8 C 0.081 3.919 9 C -0.098 4.098 10 C 0.268 3.732 11 H 0.063 0.937 12 N -0.813 5.813 13 C -0.511 4.511 14 H 0.046 0.954 15 C 0.085 3.915 16 N -0.848 5.848 17 Si 0.881 3.119 18 H -0.279 1.279 19 H -0.289 1.289 20 H -0.280 1.280 21 H 0.067 0.933 22 H 0.022 0.978 23 H 0.071 0.929 24 H 0.070 0.930 25 H 0.076 0.924 26 H 0.018 0.982 27 H 0.119 0.881 28 H 0.142 0.858 29 H 0.151 0.849 30 H 0.298 0.702 31 H 0.316 0.684 32 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.327 4.757 -7.387 10.828 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 N -0.208 5.208 3 C -0.108 4.108 4 C 0.027 3.973 5 C -0.230 4.230 6 C -0.086 4.086 7 N -0.199 5.199 8 C -0.076 4.076 9 C -0.103 4.103 10 C 0.158 3.842 11 H 0.081 0.919 12 N -0.340 5.340 13 C -0.550 4.550 14 H 0.064 0.936 15 C -0.121 4.121 16 N -0.483 5.483 17 Si 0.709 3.291 18 H -0.205 1.205 19 H -0.214 1.214 20 H -0.205 1.205 21 H 0.086 0.914 22 H 0.040 0.960 23 H 0.090 0.910 24 H 0.089 0.911 25 H 0.095 0.905 26 H 0.037 0.963 27 H 0.137 0.863 28 H 0.160 0.840 29 H 0.168 0.832 30 H 0.109 0.891 31 H 0.129 0.871 32 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -5.713 4.042 -6.642 9.649 hybrid contribution -0.032 1.675 -0.714 1.821 sum -5.745 5.717 -7.356 10.946 Atomic orbital electron populations 1.22423 0.86728 1.02378 1.00073 1.59190 1.07077 1.13898 1.40593 1.22352 1.01804 0.86917 0.99729 1.18944 0.95717 0.94496 0.88100 1.22560 1.03695 1.01997 0.94740 1.22272 0.95596 0.92217 0.98477 1.67590 1.12728 1.14897 1.24649 1.22558 0.98306 0.99771 0.86999 1.22834 0.92396 0.93047 1.02002 1.18051 0.97140 0.85172 0.83880 0.91934 1.59210 1.07819 1.07407 1.59530 1.20530 1.18980 1.15803 0.99684 0.93582 1.24869 0.96091 0.94499 0.96638 1.70080 1.40430 1.29061 1.08683 0.86878 0.83174 0.81031 0.77997 1.20508 1.21430 1.20549 0.91446 0.95976 0.90999 0.91099 0.90547 0.96322 0.86265 0.84013 0.83208 0.89140 0.87057 0.93537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.46 9.35 60.07 0.56 1.02 16 2 N -0.49 -8.90 4.26 -186.65 -0.80 -9.69 16 3 C 0.04 0.63 9.34 60.06 0.56 1.19 16 4 C 0.13 2.49 4.70 -83.60 -0.39 2.10 16 5 C -0.21 -3.42 8.73 -39.25 -0.34 -3.76 16 6 C 0.07 1.18 11.17 -17.61 -0.20 0.99 16 7 N -0.49 -9.19 10.36 -13.35 -0.14 -9.32 16 8 C 0.08 1.59 10.41 -17.60 -0.18 1.40 16 9 C -0.10 -2.06 5.04 -104.28 -0.53 -2.58 16 10 C 0.27 6.48 2.53 -70.02 -0.18 6.31 16 11 H 0.06 1.71 7.87 -51.93 -0.41 1.30 16 12 N -0.81 -18.65 8.02 -6.65 -0.05 -18.71 16 13 C -0.51 -13.71 8.71 -34.44 -0.30 -14.01 16 14 H 0.05 1.26 7.74 -52.48 -0.41 0.86 16 15 C 0.09 2.35 5.39 -17.82 -0.10 2.25 16 16 N -0.85 -24.43 12.77 55.43 0.71 -23.72 16 17 Si 0.88 21.29 29.54 -169.99 -5.02 16.27 16 18 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 19 H -0.29 -6.96 7.11 56.52 0.40 -6.56 16 20 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 21 H 0.07 1.01 8.14 -51.93 -0.42 0.59 16 22 H 0.02 0.28 7.20 -51.93 -0.37 -0.09 16 23 H 0.07 0.94 8.14 -51.93 -0.42 0.51 16 24 H 0.07 1.04 8.14 -51.92 -0.42 0.61 16 25 H 0.08 1.39 8.12 -51.93 -0.42 0.97 16 26 H 0.02 0.26 7.55 -51.93 -0.39 -0.13 16 27 H 0.12 1.66 7.21 -52.49 -0.38 1.28 16 28 H 0.14 1.86 8.06 -52.49 -0.42 1.43 16 29 H 0.15 2.77 6.26 -52.49 -0.33 2.44 16 30 H 0.30 6.12 9.06 -39.29 -0.36 5.76 16 31 H 0.32 6.90 7.32 -39.29 -0.29 6.61 16 32 H 0.25 7.09 8.31 -40.82 -0.34 6.75 16 LS Contribution 270.75 15.07 4.08 4.08 Total: -1.00 -29.98 270.75 -6.49 -36.47 By element: Atomic # 1 Polarization: 13.91 SS G_CDS: -4.18 Total: 9.73 kcal Atomic # 6 Polarization: -4.00 SS G_CDS: -1.09 Total: -5.10 kcal Atomic # 7 Polarization: -61.17 SS G_CDS: -0.28 Total: -61.45 kcal Atomic # 14 Polarization: 21.29 SS G_CDS: -5.02 Total: 16.27 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -29.98 -6.49 -36.47 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000261289775.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.314 kcal (2) G-P(sol) polarization free energy of solvation -29.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.334 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.471 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.843 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds