Wall clock time and date at job start Mon Mar 30 2020 02:51:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 C 1.50709 * 109.46702 * 203.06115 * 3 2 1 5 5 C 1.38111 * 120.49715 * 265.00066 * 4 3 2 6 6 C 1.39076 * 118.58017 * 180.02562 * 5 4 3 7 7 Cl 1.73600 * 120.23636 * 179.97438 * 6 5 4 8 8 C 1.38971 * 119.52700 * 359.97438 * 6 5 4 9 9 N 1.31373 * 120.98139 * 0.02562 * 8 6 5 10 10 C 1.33645 * 121.52896 * 0.02562 * 9 8 6 11 11 C 1.41350 * 119.81345 * 180.02562 * 10 9 8 12 12 H 1.07997 * 119.99885 * 173.03812 * 11 10 9 13 13 C 1.40027 * 119.99578 * 353.03887 * 11 10 9 14 14 N 1.30746 * 120.00005 * 6.06175 * 13 11 10 15 15 Si 1.86800 * 119.99758 * 186.05731 * 13 11 10 16 16 H 1.48508 * 109.47004 * 94.99064 * 15 13 11 17 17 H 1.48496 * 109.47436 * 214.98967 * 15 13 11 18 18 H 1.48498 * 109.47508 * 334.99335 * 15 13 11 19 19 H 1.09000 * 109.46966 * 83.06347 * 3 2 1 20 20 H 1.08998 * 109.47577 * 323.05718 * 3 2 1 21 21 H 1.08004 * 120.70771 * 0.04619 * 5 4 3 22 22 H 1.07998 * 119.51231 * 179.72521 * 8 6 5 23 23 H 0.97006 * 119.99563 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1096 1.3083 0.5566 5 6 3.4405 2.3490 -0.2889 6 6 3.8999 3.5379 0.2676 7 17 4.3286 4.8736 -0.7551 8 6 4.0133 3.6491 1.6482 9 7 3.6935 2.6474 2.4359 10 6 3.2489 1.4867 1.9449 11 6 2.9145 0.4330 2.8257 12 1 2.4502 -0.4638 2.4432 13 6 3.1855 0.5521 4.1944 14 7 3.6373 1.6807 4.6755 15 14 2.9012 -0.9015 5.3327 16 1 4.1723 -1.6494 5.5073 17 1 2.4298 -0.4116 6.6529 18 1 1.8758 -1.7991 4.7428 19 1 2.9713 -0.1233 -1.0201 20 1 2.9717 -0.8205 0.6176 21 1 3.3443 2.2420 -1.3593 22 1 4.3743 4.5709 2.0799 23 1 3.8247 1.7633 5.6238 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044371292.mol2 23 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:51:50 Heat of formation + Delta-G solvation = 38.765445 kcal Electronic energy + Delta-G solvation = -12196.404421 eV Core-core repulsion = 9842.067710 eV Total energy + Delta-G solvation = -2354.336711 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 222.025 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -38.71389 -36.00198 -35.45163 -33.80031 -32.51856 -30.28309 -27.61549 -25.64599 -21.96191 -21.05763 -17.78960 -16.89069 -16.08562 -15.12631 -14.82220 -14.29211 -13.38194 -13.22062 -12.82374 -12.48461 -12.13351 -11.86118 -11.52388 -11.33167 -11.22025 -11.05263 -10.84713 -10.57620 -10.33578 -9.93783 -9.47354 -8.46342 -7.90801 -7.72271 -6.71850 -4.83455 2.36835 2.58373 2.96694 2.99377 3.00467 3.31458 3.43069 3.50322 3.75575 4.43885 4.82398 5.56342 5.70010 5.79054 5.88141 6.12815 6.16604 6.44130 6.79522 6.92544 7.15611 7.20053 7.58890 7.88906 8.20753 8.32591 8.56121 9.74324 10.00403 Molecular weight = 222.03amu Principal moments of inertia in cm(-1) A = 0.026089 B = 0.010519 C = 0.007850 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1072.998977 B = 2661.259314 C = 3566.012613 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.469 5.469 2 C 0.228 3.772 3 C 0.042 3.958 4 C -0.252 4.252 5 C -0.024 4.024 6 C -0.227 4.227 7 Cl -0.125 7.125 8 C 0.154 3.846 9 N -0.470 5.470 10 C 0.260 3.740 11 C -0.412 4.412 12 H 0.091 0.909 13 C 0.066 3.934 14 N -0.701 5.701 15 Si 0.909 3.091 16 H -0.265 1.265 17 H -0.273 1.273 18 H -0.259 1.259 19 H 0.097 0.903 20 H 0.113 0.887 21 H 0.110 0.890 22 H 0.129 0.871 23 H 0.279 0.721 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.952 -1.808 -3.412 4.860 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.146 5.146 2 C -0.089 4.089 3 C 0.002 3.998 4 C -0.259 4.259 5 C -0.049 4.049 6 C -0.259 4.259 7 Cl -0.097 7.097 8 C -0.015 4.015 9 N -0.182 5.182 10 C 0.137 3.863 11 C -0.441 4.441 12 H 0.109 0.891 13 C -0.162 4.162 14 N -0.321 5.321 15 Si 0.732 3.268 16 H -0.190 1.190 17 H -0.198 1.198 18 H -0.182 1.182 19 H 0.115 0.885 20 H 0.131 0.869 21 H 0.128 0.872 22 H 0.146 0.854 23 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 1.403 -1.569 -2.355 3.158 hybrid contribution 0.337 -0.377 -0.470 0.691 sum 1.740 -1.946 -2.825 3.846 Atomic orbital electron populations 1.81066 1.13404 1.10045 1.10130 1.29545 0.95493 0.91933 0.91935 1.17808 0.80908 0.98626 1.02482 1.19912 1.16022 0.95332 0.94618 1.20646 0.94946 0.91113 0.98148 1.21428 1.22063 0.90776 0.91624 1.98225 1.93101 1.48676 1.69734 1.22668 0.93412 0.97828 0.87594 1.68961 1.15454 0.99315 1.34444 1.18457 0.88536 0.90813 0.88497 1.19779 1.32043 1.00851 0.91467 0.89092 1.26147 0.93734 0.96949 0.99320 1.70095 1.23737 1.23662 1.14572 0.86261 0.79862 0.81228 0.79424 1.19031 1.19824 1.18230 0.88508 0.86922 0.87209 0.85363 0.90970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -9.80 18.54 42.15 0.78 -9.02 14 2 C 0.23 4.27 15.25 -20.76 -0.32 3.96 14 3 C 0.04 0.69 5.20 -30.67 -0.16 0.53 14 4 C -0.25 -5.19 5.16 -103.75 -0.54 -5.73 14 5 C -0.02 -0.47 9.62 -39.32 -0.38 -0.85 14 6 C -0.23 -4.72 6.37 -39.00 -0.25 -4.97 14 7 Cl -0.12 -2.26 28.98 -51.86 -1.50 -3.76 14 8 C 0.15 3.48 10.98 -17.48 -0.19 3.28 14 9 N -0.47 -11.85 7.89 -11.08 -0.09 -11.94 14 10 C 0.26 6.26 6.54 -84.98 -0.56 5.70 14 11 C -0.41 -9.70 8.59 -37.73 -0.32 -10.03 14 12 H 0.09 1.96 6.14 -52.49 -0.32 1.64 14 13 C 0.07 1.53 5.49 -17.34 -0.10 1.44 14 14 N -0.70 -17.13 11.49 55.55 0.64 -16.49 14 15 Si 0.91 17.09 29.56 -169.99 -5.03 12.06 14 16 H -0.27 -4.88 7.11 56.52 0.40 -4.47 14 17 H -0.27 -5.12 7.11 56.52 0.40 -4.72 14 18 H -0.26 -4.84 7.11 56.52 0.40 -4.44 14 19 H 0.10 1.22 8.06 -51.93 -0.42 0.80 14 20 H 0.11 1.70 6.73 -51.93 -0.35 1.35 14 21 H 0.11 1.89 8.06 -52.48 -0.42 1.46 14 22 H 0.13 2.65 8.06 -52.49 -0.42 2.23 14 23 H 0.28 6.16 8.29 -40.82 -0.34 5.82 14 LS Contribution 236.35 15.07 3.56 3.56 Total: -1.00 -27.07 236.35 -5.51 -32.58 By element: Atomic # 1 Polarization: 0.74 SS G_CDS: -1.07 Total: -0.33 kcal Atomic # 6 Polarization: -3.86 SS G_CDS: -2.81 Total: -6.67 kcal Atomic # 7 Polarization: -38.78 SS G_CDS: 1.33 Total: -37.44 kcal Atomic # 14 Polarization: 17.09 SS G_CDS: -5.03 Total: 12.06 kcal Atomic # 17 Polarization: -2.26 SS G_CDS: -1.50 Total: -3.76 kcal Total LS contribution 3.56 Total: 3.56 kcal Total: -27.07 -5.51 -32.58 kcal The number of atoms in the molecule is 23 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044371292.mol2 23 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.343 kcal (2) G-P(sol) polarization free energy of solvation -27.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.578 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds