Wall clock time and date at job start Mon Mar 30 2020 03:06:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 N 1.40293 * 126.00061 * 2 1 4 4 C 1.30146 * 108.26037 * 179.84129 * 3 2 1 5 5 C 1.40431 * 108.28582 * 0.46555 * 4 3 2 6 6 C 1.35187 * 107.97525 * 359.65474 * 5 4 3 7 7 O 1.35765 * 126.25917 * 180.11690 * 6 5 4 8 8 C 1.50864 * 123.67476 * 179.47822 * 5 4 3 9 9 C 1.53389 * 108.19723 * 343.51032 * 8 5 4 10 10 H 1.09007 * 109.42807 * 290.42581 * 9 8 5 11 11 C 1.50699 * 109.39706 * 170.54528 * 9 8 5 12 12 H 1.07999 * 119.99645 * 359.77878 * 11 9 8 13 13 C 1.37876 * 120.00162 * 179.77381 * 11 9 8 14 14 N 1.31506 * 119.99956 * 0.02562 * 13 11 9 15 15 Si 1.86804 * 119.99745 * 180.02562 * 13 11 9 16 16 H 1.48495 * 109.46994 * 0.02562 * 15 13 11 17 17 H 1.48498 * 109.46894 * 120.00302 * 15 13 11 18 18 H 1.48496 * 109.46898 * 240.00071 * 15 13 11 19 19 C 1.53028 * 109.71269 * 50.49147 * 9 8 5 20 20 C 1.50967 * 128.25143 * 180.29101 * 4 3 2 21 21 H 1.09001 * 109.47060 * 269.69283 * 1 2 3 22 22 H 1.09004 * 109.47073 * 29.68772 * 1 2 3 23 23 H 1.09000 * 109.47212 * 149.68855 * 1 2 3 24 24 H 0.96701 * 113.99551 * 269.97320 * 7 6 5 25 25 H 1.09002 * 109.72119 * 103.17735 * 8 5 4 26 26 H 1.08996 * 109.72102 * 223.82810 * 8 5 4 27 27 H 0.97007 * 119.99986 * 179.97438 * 14 13 11 28 28 H 1.09002 * 109.42627 * 168.20370 * 19 9 8 29 29 H 1.09009 * 109.37644 * 48.35254 * 19 9 8 30 30 H 1.08995 * 109.71489 * 283.25877 * 20 4 3 31 31 H 1.09001 * 109.71455 * 43.85968 * 20 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.2897 1.1350 0.0000 4 6 3.5293 0.7384 0.0034 5 6 3.5427 -0.6658 -0.0051 6 6 2.2608 -1.0952 -0.0060 7 8 1.8472 -2.3884 -0.0111 8 6 4.8061 -1.4902 -0.0156 9 6 5.9690 -0.5794 -0.4288 10 1 5.8636 -0.3111 -1.4801 11 6 7.2722 -1.3083 -0.2257 12 1 7.2724 -2.3163 0.1620 13 6 8.4643 -0.6884 -0.5349 14 7 8.4641 0.5391 -1.0066 15 14 10.0797 -1.5923 -0.2837 16 1 9.8088 -2.9500 0.2534 17 1 10.7899 -1.7070 -1.5828 18 1 10.9244 -0.8387 0.6773 19 6 5.9579 0.6910 0.4242 20 6 4.7807 1.5828 0.0109 21 1 -0.3633 -0.0055 1.0277 22 1 -0.3633 0.8928 -0.5090 23 1 -0.3634 -0.8872 -0.5187 24 1 1.7265 -2.7591 -0.8960 25 1 4.9907 -1.8931 0.9803 26 1 4.7064 -2.3068 -0.7306 27 1 9.3029 0.9754 -1.2237 28 1 6.8921 1.2335 0.2788 29 1 5.8559 0.4201 1.4752 30 1 4.9576 1.9867 -0.9859 31 1 4.6690 2.3995 0.7241 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259514281.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:06:06 Heat of formation + Delta-G solvation = 24.873469 kcal Electronic energy + Delta-G solvation = -15208.802340 eV Core-core repulsion = 12684.820253 eV Total energy + Delta-G solvation = -2523.982088 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 222.111 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.07251 -37.10542 -36.00238 -32.94640 -31.31108 -30.59680 -27.77852 -26.55266 -24.31732 -22.18030 -20.71784 -20.48296 -18.07633 -17.71179 -16.35034 -15.88955 -15.05693 -14.47412 -14.12789 -13.67076 -13.21314 -12.85735 -12.62644 -12.52416 -12.16834 -12.11964 -11.36770 -11.07274 -10.89895 -10.73670 -10.50254 -10.00001 -9.86038 -9.61593 -9.08361 -8.68938 -8.61153 -8.26359 -7.67546 -5.94525 -4.00603 2.08613 2.67854 3.23914 3.33021 3.41302 3.45349 4.28494 4.47325 4.75681 5.21471 5.35129 5.36422 5.44221 5.83645 6.02714 6.22648 6.27456 6.56277 6.59687 6.65956 6.78787 6.85831 7.02217 7.23513 7.29684 7.53384 7.78582 7.86057 8.06346 8.13747 8.20406 8.51659 9.03827 9.63876 11.11012 Molecular weight = 222.11amu Principal moments of inertia in cm(-1) A = 0.052735 B = 0.007448 C = 0.006669 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 530.828747 B = 3758.329259 C = 4197.348523 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.110 3.890 2 N -0.403 5.403 3 N -0.290 5.290 4 C 0.102 3.898 5 C -0.215 4.215 6 C 0.234 3.766 7 O -0.465 6.465 8 C -0.030 4.030 9 C 0.051 3.949 10 H 0.028 0.972 11 C -0.509 4.509 12 H 0.056 0.944 13 C 0.060 3.940 14 N -0.890 5.890 15 Si 0.889 3.111 16 H -0.274 1.274 17 H -0.285 1.285 18 H -0.285 1.285 19 C -0.109 4.109 20 C -0.039 4.039 21 H 0.066 0.934 22 H 0.083 0.917 23 H 0.077 0.923 24 H 0.389 0.611 25 H 0.059 0.941 26 H 0.052 0.948 27 H 0.259 0.741 28 H 0.103 0.897 29 H 0.034 0.966 30 H 0.078 0.922 31 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.087 -1.453 0.275 12.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.032 4.032 2 N -0.197 5.197 3 N -0.115 5.115 4 C -0.065 4.065 5 C -0.227 4.227 6 C 0.069 3.931 7 O -0.268 6.268 8 C -0.068 4.068 9 C 0.032 3.968 10 H 0.046 0.954 11 C -0.548 4.548 12 H 0.074 0.926 13 C -0.140 4.140 14 N -0.529 5.529 15 Si 0.717 3.283 16 H -0.198 1.198 17 H -0.212 1.212 18 H -0.211 1.211 19 C -0.147 4.147 20 C -0.078 4.078 21 H 0.085 0.915 22 H 0.102 0.898 23 H 0.096 0.904 24 H 0.244 0.756 25 H 0.077 0.923 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.121 0.879 29 H 0.053 0.947 30 H 0.097 0.903 31 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -12.892 -0.410 0.826 12.925 hybrid contribution 1.016 -1.312 -0.404 1.708 sum -11.876 -1.722 0.422 12.008 Atomic orbital electron populations 1.21605 0.75474 1.03454 1.02685 1.48875 1.06056 1.03615 1.61178 1.77093 1.01659 1.05725 1.26991 1.22570 0.93207 0.94089 0.96617 1.20364 0.93867 0.95004 1.13493 1.18207 0.88821 0.80127 1.05979 1.84874 1.88877 1.19701 1.33299 1.20190 0.89905 0.96471 1.00261 1.18708 0.91202 0.91315 0.95562 0.95398 1.21272 0.90783 1.00164 1.42554 0.92579 1.24957 0.98970 0.94944 0.95177 1.69873 1.26333 1.12198 1.44537 0.86583 0.83984 0.80008 0.77705 1.19839 1.21156 1.21087 1.21712 0.96925 0.98014 0.98064 1.20378 0.89067 0.96438 1.01957 0.91513 0.89789 0.90412 0.75577 0.92259 0.92972 0.93088 0.87855 0.94697 0.90337 0.91726 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.24 11.42 59.85 0.68 1.93 16 2 N -0.40 -6.85 4.03 -68.41 -0.28 -7.12 16 3 N -0.29 -5.71 12.55 33.75 0.42 -5.28 16 4 C 0.10 2.12 7.10 -82.35 -0.58 1.54 16 5 C -0.22 -4.43 5.91 -104.80 -0.62 -5.05 16 6 C 0.23 4.19 7.94 -17.07 -0.14 4.05 16 7 O -0.47 -6.78 13.58 -19.00 -0.26 -7.04 16 8 C -0.03 -0.66 5.51 -27.60 -0.15 -0.81 16 9 C 0.05 1.25 2.05 -91.56 -0.19 1.07 16 10 H 0.03 0.75 8.10 -51.93 -0.42 0.33 16 11 C -0.51 -13.78 8.55 -34.44 -0.29 -14.08 16 12 H 0.06 1.50 7.74 -52.49 -0.41 1.10 16 13 C 0.06 1.64 5.25 -17.82 -0.09 1.54 16 14 N -0.89 -24.86 11.30 55.43 0.63 -24.24 16 15 Si 0.89 21.00 29.54 -169.99 -5.02 15.98 16 16 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 17 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 18 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 19 C -0.11 -2.55 5.04 -26.53 -0.13 -2.69 16 20 C -0.04 -0.81 6.31 -27.57 -0.17 -0.98 16 21 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 22 H 0.08 0.84 8.14 -51.93 -0.42 0.42 16 23 H 0.08 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.39 3.68 9.06 45.56 0.41 4.09 16 25 H 0.06 1.31 8.12 -51.93 -0.42 0.89 16 26 H 0.05 1.08 8.14 -51.93 -0.42 0.66 16 27 H 0.26 6.90 8.31 -40.82 -0.34 6.56 16 28 H 0.10 2.67 5.84 -51.93 -0.30 2.36 16 29 H 0.03 0.81 8.10 -51.92 -0.42 0.39 16 30 H 0.08 1.61 8.14 -51.93 -0.42 1.18 16 31 H 0.06 1.21 8.14 -51.93 -0.42 0.78 16 LS Contribution 261.53 15.07 3.94 3.94 Total: -1.00 -31.07 261.53 -5.49 -36.56 By element: Atomic # 1 Polarization: 3.91 SS G_CDS: -3.23 Total: 0.68 kcal Atomic # 6 Polarization: -11.79 SS G_CDS: -1.69 Total: -13.48 kcal Atomic # 7 Polarization: -37.42 SS G_CDS: 0.77 Total: -36.64 kcal Atomic # 8 Polarization: -6.78 SS G_CDS: -0.26 Total: -7.04 kcal Atomic # 14 Polarization: 21.00 SS G_CDS: -5.02 Total: 15.98 kcal Total LS contribution 3.94 Total: 3.94 kcal Total: -31.07 -5.49 -36.56 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259514281.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.433 kcal (2) G-P(sol) polarization free energy of solvation -31.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.559 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds