Wall clock time and date at job start Mon Mar 30 2020 03:11:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 C 1.36930 * 120.00137 * 2 1 4 4 H 1.08003 * 119.99927 * 202.66534 * 3 2 1 5 5 C 1.38810 * 120.00397 * 22.66587 * 3 2 1 6 6 N 1.31617 * 119.99920 * 11.46294 * 5 3 2 7 7 Si 1.86794 * 120.00138 * 191.47025 * 5 3 2 8 8 H 1.48504 * 109.47588 * 59.99821 * 7 5 3 9 9 H 1.48499 * 109.47150 * 179.97438 * 7 5 3 10 10 H 1.48504 * 109.47098 * 299.99294 * 7 5 3 11 11 C 1.46503 * 119.99390 * 179.97438 * 2 1 3 12 12 H 1.09001 * 109.40505 * 180.14625 * 11 2 1 13 13 C 1.52997 * 109.35052 * 60.33108 * 11 2 1 14 14 C 1.53469 * 110.01157 * 168.18788 * 13 11 2 15 15 C 1.50613 * 108.07836 * 50.79007 * 14 13 11 16 16 N 1.29071 * 130.42948 * 163.20629 * 15 14 13 17 17 O 1.21517 * 111.29333 * 180.30946 * 16 15 14 18 18 C 1.34586 * 111.65258 * 359.89939 * 17 16 15 19 19 C 1.33825 * 106.05905 * 359.97438 * 18 17 16 20 20 C 1.50142 * 131.38954 * 180.32041 * 19 18 17 21 21 H 1.09004 * 109.46872 * 273.93541 * 1 2 3 22 22 H 1.09000 * 109.46880 * 33.93034 * 1 2 3 23 23 H 1.08996 * 109.47437 * 153.93180 * 1 2 3 24 24 H 0.97002 * 120.00579 * 179.97438 * 6 5 3 25 25 H 1.09000 * 109.38242 * 288.34735 * 13 11 2 26 26 H 1.08992 * 109.38262 * 48.01927 * 13 11 2 27 27 H 1.09004 * 109.74298 * 170.44242 * 14 13 11 28 28 H 1.09004 * 109.73717 * 291.14745 * 14 13 11 29 29 H 1.07997 * 126.98725 * 179.97438 * 18 17 16 30 30 H 1.09000 * 109.75749 * 43.96754 * 20 19 18 31 31 H 1.09002 * 109.75020 * 283.28021 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1497 1.1858 0.0000 4 1 3.1672 1.2219 -0.3604 5 6 1.5362 2.3416 0.4632 6 7 0.3908 2.2658 1.1071 7 14 2.3360 4.0044 0.1726 8 1 2.4811 4.2357 -1.2871 9 1 1.4870 5.0716 0.7603 10 1 3.6756 4.0281 0.8131 11 6 2.1974 -1.2688 0.0006 12 1 3.2689 -1.0685 0.0031 13 6 1.8320 -2.0657 -1.2534 14 6 2.7950 -3.2485 -1.4231 15 6 2.8474 -3.9995 -0.1186 16 7 3.2708 -5.1898 0.1455 17 8 3.1452 -5.4511 1.3256 18 6 2.6051 -4.4238 2.0070 19 6 2.3951 -3.4538 1.1092 20 6 1.8256 -2.0723 1.2553 21 1 -0.3633 0.0705 1.0253 22 1 -0.3633 0.8527 -0.5736 23 1 -0.3634 -0.9231 -0.4516 24 1 -0.0378 3.0734 1.4312 25 1 0.8126 -2.4399 -1.1599 26 1 1.8987 -1.4167 -2.1265 27 1 2.4336 -3.9071 -2.2130 28 1 3.7893 -2.8804 -1.6762 29 1 2.3855 -4.3889 3.0638 30 1 2.2463 -1.5918 2.1386 31 1 0.7410 -2.1289 1.3483 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259526441.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:11:25 Heat of formation + Delta-G solvation = 77.709963 kcal Electronic energy + Delta-G solvation = -15319.626936 eV Core-core repulsion = 12797.936010 eV Total energy + Delta-G solvation = -2521.690925 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 222.111 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -44.60443 -37.82349 -34.75080 -32.34630 -31.91378 -30.34797 -28.46538 -26.01325 -24.43948 -23.15670 -21.28904 -20.97308 -18.69057 -17.25020 -17.04770 -16.78626 -15.10982 -14.87971 -13.99795 -13.68948 -13.39194 -12.89582 -12.65612 -12.57524 -12.01461 -11.85968 -11.54507 -11.04561 -10.89135 -10.74842 -10.40228 -10.35052 -10.07071 -9.88300 -9.80348 -9.53906 -8.99919 -8.55266 -6.78339 -5.73926 -3.20406 1.78292 2.55409 3.37768 3.43313 3.43913 3.51995 4.30687 4.47839 4.82889 5.26987 5.30804 5.36763 5.50639 5.51901 5.74203 5.89499 5.96448 6.00598 6.10133 6.21633 6.38067 6.44557 6.56271 6.78564 6.90414 6.94216 7.38941 7.71242 7.79713 8.38513 8.50779 9.22490 9.85228 10.34390 11.30840 Molecular weight = 222.11amu Principal moments of inertia in cm(-1) A = 0.050973 B = 0.007093 C = 0.006940 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 549.175913 B = 3946.681324 C = 4033.446904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.162 3.838 2 N -0.595 5.595 3 C -0.256 4.256 4 H 0.068 0.932 5 C 0.003 3.997 6 N -0.908 5.908 7 Si 0.905 3.095 8 H -0.284 1.284 9 H -0.290 1.290 10 H -0.283 1.283 11 C 0.181 3.819 12 H 0.065 0.935 13 C -0.130 4.130 14 C -0.038 4.038 15 C 0.025 3.975 16 N -0.365 5.365 17 O 0.072 5.928 18 C -0.071 4.071 19 C -0.182 4.182 20 C -0.062 4.062 21 H 0.028 0.972 22 H 0.044 0.956 23 H -0.002 1.002 24 H 0.253 0.747 25 H 0.059 0.941 26 H 0.076 0.924 27 H 0.077 0.923 28 H 0.083 0.917 29 H 0.213 0.787 30 H 0.077 0.923 31 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.252 -10.074 -0.325 10.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 N -0.317 5.317 3 C -0.386 4.386 4 H 0.086 0.914 5 C -0.196 4.196 6 N -0.553 5.553 7 Si 0.735 3.265 8 H -0.211 1.211 9 H -0.216 1.216 10 H -0.210 1.210 11 C 0.072 3.928 12 H 0.083 0.917 13 C -0.170 4.170 14 C -0.076 4.076 15 C -0.137 4.137 16 N -0.073 5.073 17 O 0.010 5.990 18 C -0.150 4.150 19 C -0.186 4.186 20 C -0.102 4.102 21 H 0.046 0.954 22 H 0.063 0.937 23 H 0.017 0.983 24 H 0.063 0.937 25 H 0.078 0.922 26 H 0.095 0.905 27 H 0.095 0.905 28 H 0.102 0.898 29 H 0.229 0.771 30 H 0.096 0.904 31 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 2.655 -10.880 -0.960 11.240 hybrid contribution -0.040 1.641 0.413 1.693 sum 2.615 -9.239 -0.548 9.617 Atomic orbital electron populations 1.20774 0.82631 0.95661 0.99182 1.43958 1.01833 1.00062 1.85798 1.19200 0.98153 0.85438 1.35800 0.91416 1.25022 0.97732 0.98508 0.98299 1.70052 1.18146 1.27262 1.39886 0.86330 0.78505 0.83757 0.77901 1.21072 1.21634 1.20961 1.20371 0.96287 0.85950 0.90177 0.91707 1.22158 0.98194 0.95467 1.01157 1.20104 1.01531 0.95743 0.90249 1.23594 0.99895 0.91230 0.98960 1.73472 1.20518 1.17684 0.95632 1.85045 1.61919 1.37773 1.14230 1.25134 1.02046 0.87733 1.00132 1.21412 1.05005 0.99965 0.92260 1.20689 1.00329 0.87346 1.01832 0.95403 0.93713 0.98324 0.93690 0.92223 0.90540 0.90451 0.89829 0.77051 0.90434 0.90440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.86 7.84 59.85 0.47 4.33 16 2 N -0.60 -14.37 2.81 -173.15 -0.49 -14.85 16 3 C -0.26 -6.87 9.60 -15.06 -0.14 -7.01 16 4 H 0.07 1.77 7.81 -52.48 -0.41 1.36 16 5 C 0.00 0.07 5.12 -17.43 -0.09 -0.02 16 6 N -0.91 -25.94 10.61 55.49 0.59 -25.36 16 7 Si 0.91 21.52 29.57 -169.99 -5.03 16.50 16 8 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 9 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 10 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 11 C 0.18 3.58 2.54 -67.64 -0.17 3.40 16 12 H 0.06 1.33 7.82 -51.93 -0.41 0.92 16 13 C -0.13 -2.19 4.86 -26.49 -0.13 -2.32 16 14 C -0.04 -0.56 6.32 -27.68 -0.17 -0.74 16 15 C 0.02 0.40 7.22 -82.44 -0.60 -0.19 16 16 N -0.37 -6.08 12.06 32.99 0.40 -5.68 16 17 O 0.07 1.09 11.23 15.53 0.17 1.26 16 18 C -0.07 -0.95 12.28 29.18 0.36 -0.59 16 19 C -0.18 -2.91 6.05 -105.09 -0.64 -3.55 16 20 C -0.06 -1.11 5.72 -27.86 -0.16 -1.27 16 21 H 0.03 0.71 7.43 -51.93 -0.39 0.33 16 22 H 0.04 1.16 7.19 -51.93 -0.37 0.78 16 23 H 0.00 -0.04 6.69 -51.93 -0.35 -0.38 16 24 H 0.25 7.04 8.31 -40.82 -0.34 6.71 16 25 H 0.06 1.01 7.12 -51.93 -0.37 0.64 16 26 H 0.08 1.32 8.14 -51.93 -0.42 0.90 16 27 H 0.08 1.03 8.14 -51.93 -0.42 0.61 16 28 H 0.08 1.18 8.14 -51.93 -0.42 0.75 16 29 H 0.21 1.94 8.06 -52.49 -0.42 1.52 16 30 H 0.08 1.44 8.14 -51.93 -0.42 1.01 16 31 H 0.08 1.42 7.40 -51.93 -0.38 1.04 16 LS Contribution 255.56 15.07 3.85 3.85 Total: -1.00 -29.48 255.56 -5.70 -35.18 By element: Atomic # 1 Polarization: 0.98 SS G_CDS: -3.93 Total: -2.94 kcal Atomic # 6 Polarization: -6.69 SS G_CDS: -1.27 Total: -7.96 kcal Atomic # 7 Polarization: -46.39 SS G_CDS: 0.50 Total: -45.89 kcal Atomic # 8 Polarization: 1.09 SS G_CDS: 0.17 Total: 1.26 kcal Atomic # 14 Polarization: 21.52 SS G_CDS: -5.03 Total: 16.50 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -29.48 -5.70 -35.18 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259526441.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.890 kcal (2) G-P(sol) polarization free energy of solvation -29.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.180 kcal (6) G-S(sol) free energy of system = (1) + (5) 77.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds