Wall clock time and date at job start Mon Mar 30 2020 02:57:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09004 * 109.46809 * 2 1 4 4 F 1.39898 * 109.47035 * 120.00021 * 2 1 3 5 5 C 1.52999 * 109.47437 * 240.00550 * 2 1 3 6 6 H 1.08996 * 109.47440 * 54.83865 * 5 2 1 7 7 C 1.50696 * 109.47214 * 174.84118 * 5 2 1 8 8 H 1.08009 * 119.99839 * 119.99375 * 7 5 2 9 9 C 1.37871 * 120.00075 * 300.27201 * 7 5 2 10 10 N 1.31511 * 119.99924 * 359.72511 * 9 7 5 11 11 Si 1.86804 * 120.00186 * 179.72545 * 9 7 5 12 12 H 1.48493 * 109.47300 * 90.00119 * 11 9 7 13 13 H 1.48504 * 109.46971 * 210.00106 * 11 9 7 14 14 H 1.48505 * 109.46949 * 329.99820 * 11 9 7 15 15 C 1.53001 * 109.46531 * 294.83816 * 5 2 1 16 16 C 1.50704 * 109.46960 * 175.23961 * 15 5 2 17 17 C 1.38240 * 119.99858 * 275.59911 * 16 15 5 18 18 C 1.38234 * 119.99638 * 179.76620 * 17 16 15 19 19 C 1.38225 * 120.00140 * 0.50542 * 18 17 16 20 20 C 1.38241 * 120.00310 * 359.74620 * 19 18 17 21 21 C 1.38231 * 119.99931 * 95.86707 * 16 15 5 22 22 H 1.09004 * 109.47385 * 186.14472 * 1 2 3 23 23 H 1.09002 * 109.47457 * 306.14448 * 1 2 3 24 24 H 1.09001 * 109.47610 * 66.14657 * 1 2 3 25 25 H 0.97003 * 119.99975 * 180.02562 * 10 9 7 26 26 H 1.08997 * 109.47560 * 295.23747 * 15 5 2 27 27 H 1.09005 * 109.47130 * 55.24502 * 15 5 2 28 28 H 1.08003 * 120.00190 * 359.97438 * 17 16 15 29 29 H 1.08004 * 119.99604 * 180.22583 * 18 17 16 30 30 H 1.08007 * 120.00092 * 179.72545 * 19 18 17 31 31 H 1.07996 * 119.99891 * 179.97438 * 20 19 18 32 32 H 1.07993 * 120.00233 * 0.02562 * 21 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 9 1.9963 -0.6595 1.1423 5 6 2.0400 -0.7211 -1.2493 6 1 1.6033 -0.2634 -2.1368 7 6 3.5416 -0.6114 -1.3147 8 1 4.1489 -1.5045 -1.3116 9 6 4.1402 0.6292 -1.3729 10 7 3.4007 1.7167 -1.3766 11 14 6.0019 0.7654 -1.4463 12 1 6.4430 0.7613 -2.8642 13 1 6.4315 2.0305 -0.7979 14 1 6.6110 -0.3871 -0.7349 15 6 1.6387 -2.1962 -1.1861 16 6 2.0380 -2.8807 -2.4679 17 6 1.2046 -2.8259 -3.5695 18 6 1.5731 -3.4497 -4.7467 19 6 2.7701 -4.1372 -4.8193 20 6 3.6012 -4.1964 -3.7162 21 6 3.2351 -3.5681 -2.5405 22 1 -0.3634 -1.0218 0.1100 23 1 -0.3634 0.6061 0.8299 24 1 -0.3634 0.4156 -0.9399 25 1 3.8219 2.5895 -1.4179 26 1 2.1431 -2.6744 -0.3465 27 1 0.5595 -2.2738 -1.0537 28 1 0.2671 -2.2928 -3.5113 29 1 0.9236 -3.4038 -5.6084 30 1 3.0560 -4.6283 -5.7377 31 1 4.5362 -4.7339 -3.7728 32 1 3.8840 -3.6150 -1.6785 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260225598.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:57:36 Heat of formation + Delta-G solvation = -48.298716 kcal Electronic energy + Delta-G solvation = -15197.014249 eV Core-core repulsion = 12649.939216 eV Total energy + Delta-G solvation = -2547.075033 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 222.112 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -46.13738 -38.68698 -34.99624 -32.05321 -30.77725 -30.30630 -27.84585 -25.20175 -22.86520 -21.95854 -20.76011 -19.06981 -16.62487 -16.09103 -15.18723 -14.56738 -14.40516 -14.29646 -13.84316 -13.64069 -12.88435 -12.50377 -12.42270 -12.24131 -11.90072 -11.45689 -11.31703 -10.95228 -10.83766 -10.62239 -10.47426 -10.28004 -9.82946 -9.72502 -9.27143 -8.78779 -8.39753 -8.31251 -7.89497 -6.04590 -4.07936 1.98496 2.02038 3.31141 3.37408 3.41267 4.41049 4.43167 5.26099 5.42037 5.43522 5.55547 5.70822 5.87279 6.01515 6.05301 6.12050 6.14133 6.26609 6.47275 6.56315 6.62059 6.68294 6.82701 6.91180 7.00903 7.03818 7.10328 7.36336 7.54434 7.65494 7.73442 7.98962 8.33831 8.92442 9.56437 11.02086 Molecular weight = 222.11amu Principal moments of inertia in cm(-1) A = 0.020746 B = 0.012013 C = 0.008765 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1349.327948 B = 2330.175026 C = 3193.835868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.080 3.920 3 H 0.112 0.888 4 F -0.232 7.232 5 C 0.034 3.966 6 H 0.042 0.958 7 C -0.499 4.499 8 H 0.062 0.938 9 C 0.060 3.940 10 N -0.898 5.898 11 Si 0.892 3.108 12 H -0.281 1.281 13 H -0.287 1.287 14 H -0.273 1.273 15 C -0.079 4.079 16 C -0.036 4.036 17 C -0.125 4.125 18 C -0.124 4.124 19 C -0.143 4.143 20 C -0.124 4.124 21 C -0.106 4.106 22 H 0.051 0.949 23 H 0.045 0.955 24 H 0.063 0.937 25 H 0.262 0.738 26 H 0.065 0.935 27 H 0.051 0.949 28 H 0.114 0.886 29 H 0.112 0.888 30 H 0.110 0.890 31 H 0.112 0.888 32 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.757 -7.071 -2.874 8.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.044 3.956 3 H 0.130 0.870 4 F -0.213 7.213 5 C 0.015 3.985 6 H 0.060 0.940 7 C -0.537 4.537 8 H 0.080 0.920 9 C -0.141 4.141 10 N -0.538 5.538 11 Si 0.720 3.280 12 H -0.207 1.207 13 H -0.213 1.213 14 H -0.198 1.198 15 C -0.116 4.116 16 C -0.036 4.036 17 C -0.143 4.143 18 C -0.142 4.142 19 C -0.161 4.161 20 C -0.142 4.142 21 C -0.124 4.124 22 H 0.070 0.930 23 H 0.064 0.936 24 H 0.082 0.918 25 H 0.072 0.928 26 H 0.083 0.917 27 H 0.070 0.930 28 H 0.132 0.868 29 H 0.130 0.870 30 H 0.128 0.872 31 H 0.130 0.870 32 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -3.722 -6.892 -2.849 8.334 hybrid contribution 1.088 0.286 -0.100 1.129 sum -2.634 -6.606 -2.949 7.699 Atomic orbital electron populations 1.22458 0.98256 1.01116 1.01574 1.21933 0.90451 1.00059 0.83206 0.87013 1.92632 1.90619 1.84049 1.54028 1.19222 0.96980 0.88608 0.93640 0.94015 1.21159 0.90847 0.92480 1.49217 0.92021 1.24949 0.98234 0.95874 0.95011 1.69776 1.34990 0.97722 1.51316 0.86574 0.85790 0.77538 0.78085 1.20728 1.21252 1.19824 1.20797 0.98892 0.98459 0.93484 1.19958 0.93610 0.94058 0.96017 1.20978 1.00032 1.00206 0.93100 1.20972 0.96946 0.98842 0.97474 1.20918 0.95497 1.01518 0.98157 1.21046 0.99170 1.00377 0.93641 1.21061 0.96227 0.97157 0.97922 0.93039 0.93592 0.91801 0.92833 0.91657 0.93049 0.86757 0.87040 0.87178 0.86984 0.86309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -3.35 9.26 37.16 0.34 -3.01 16 2 C 0.08 1.88 3.45 -26.73 -0.09 1.79 16 3 H 0.11 2.93 5.94 -51.93 -0.31 2.63 16 4 F -0.23 -5.70 16.29 2.25 0.04 -5.66 16 5 C 0.03 0.82 1.63 -91.77 -0.15 0.67 16 6 H 0.04 1.08 8.14 -51.93 -0.42 0.65 16 7 C -0.50 -13.36 7.85 -34.44 -0.27 -13.63 16 8 H 0.06 1.64 6.14 -52.48 -0.32 1.32 16 9 C 0.06 1.63 5.29 -17.82 -0.09 1.54 16 10 N -0.90 -25.13 11.28 55.43 0.63 -24.51 16 11 Si 0.89 21.51 29.54 -169.99 -5.02 16.49 16 12 H -0.28 -6.76 7.11 56.52 0.40 -6.35 16 13 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 14 H -0.27 -6.53 7.11 56.52 0.40 -6.13 16 15 C -0.08 -1.64 4.41 -27.88 -0.12 -1.76 16 16 C -0.04 -0.72 4.73 -104.62 -0.49 -1.21 16 17 C -0.13 -2.24 9.72 -39.58 -0.38 -2.62 16 18 C -0.12 -1.99 10.05 -39.59 -0.40 -2.39 16 19 C -0.14 -2.24 10.05 -39.59 -0.40 -2.64 16 20 C -0.12 -2.08 10.05 -39.58 -0.40 -2.47 16 21 C -0.11 -2.00 8.57 -39.58 -0.34 -2.34 16 22 H 0.05 0.90 6.77 -51.93 -0.35 0.55 16 23 H 0.04 0.80 8.14 -51.93 -0.42 0.38 16 24 H 0.06 1.15 8.14 -51.93 -0.42 0.73 16 25 H 0.26 7.04 8.31 -40.82 -0.34 6.70 16 26 H 0.06 1.39 7.74 -51.93 -0.40 0.99 16 27 H 0.05 0.96 6.47 -51.93 -0.34 0.62 16 28 H 0.11 1.87 8.06 -52.48 -0.42 1.45 16 29 H 0.11 1.48 8.06 -52.48 -0.42 1.05 16 30 H 0.11 1.41 8.06 -52.48 -0.42 0.99 16 31 H 0.11 1.59 8.06 -52.49 -0.42 1.16 16 32 H 0.12 2.23 7.53 -52.49 -0.40 1.83 16 LS Contribution 269.02 15.07 4.05 4.05 Total: -1.00 -28.30 269.02 -7.31 -35.61 By element: Atomic # 1 Polarization: 6.30 SS G_CDS: -4.21 Total: 2.09 kcal Atomic # 6 Polarization: -25.28 SS G_CDS: -2.80 Total: -28.07 kcal Atomic # 7 Polarization: -25.13 SS G_CDS: 0.63 Total: -24.51 kcal Atomic # 9 Polarization: -5.70 SS G_CDS: 0.04 Total: -5.66 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -5.02 Total: 16.49 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -28.30 -7.31 -35.61 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260225598.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.687 kcal (2) G-P(sol) polarization free energy of solvation -28.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.299 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds