Wall clock time and date at job start Mon Mar 30 2020 03:08:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.36420 * 126.56081 * 2 1 4 4 C 1.36219 * 107.19494 * 180.29145 * 3 2 1 5 5 C 1.50694 * 125.68816 * 179.75658 * 4 3 2 6 6 H 1.09006 * 110.33006 * 245.70306 * 5 4 3 7 7 C 1.54480 * 110.37519 * 123.45030 * 5 4 3 8 8 C 1.54504 * 104.06544 * 217.19018 * 7 5 4 9 9 C 1.54478 * 104.06244 * 359.97438 * 8 7 5 10 10 O 1.44428 * 110.37514 * 7.95011 * 5 4 3 11 11 N 1.32756 * 108.62124 * 359.73586 * 4 3 2 12 12 C 1.32989 * 109.22303 * 0.02562 * 11 4 3 13 13 C 1.40002 * 125.96039 * 180.02562 * 12 11 4 14 14 H 1.08001 * 119.99756 * 170.81910 * 13 12 11 15 15 C 1.40231 * 119.99942 * 350.82093 * 13 12 11 16 16 N 1.30685 * 119.99991 * 167.22570 * 15 13 12 17 17 Si 1.86805 * 120.00121 * 347.22853 * 15 13 12 18 18 H 1.48501 * 109.47175 * 90.00058 * 17 15 13 19 19 H 1.48498 * 109.47089 * 329.99673 * 17 15 13 20 20 H 1.48503 * 109.46987 * 209.99803 * 17 15 13 21 21 H 1.09001 * 109.46609 * 270.15478 * 1 2 3 22 22 H 1.08996 * 109.46799 * 30.14613 * 1 2 3 23 23 H 1.08994 * 109.47567 * 150.15198 * 1 2 3 24 24 H 1.07996 * 126.39960 * 0.02562 * 3 2 1 25 25 H 1.09000 * 110.50678 * 335.83523 * 7 5 4 26 26 H 1.08996 * 110.50962 * 98.54084 * 7 5 4 27 27 H 1.09001 * 110.51252 * 118.64189 * 8 7 5 28 28 H 1.09005 * 110.51259 * 241.35474 * 8 7 5 29 29 H 1.09008 * 110.37293 * 142.80943 * 9 8 7 30 30 H 1.09000 * 110.37364 * 265.14656 * 9 8 7 31 31 H 0.97002 * 119.99836 * 1.56297 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2776 1.0958 0.0000 4 6 3.5627 0.6441 -0.0066 5 6 4.7979 1.5073 -0.0143 6 1 5.3441 1.3785 -0.9488 7 6 5.7026 1.1622 1.1894 8 6 6.2766 2.5270 1.6311 9 6 5.6513 3.5351 0.6417 10 8 4.4430 2.8946 0.1736 11 7 3.5455 -0.6834 -0.0048 12 6 2.2842 -1.1049 0.0023 13 6 1.8636 -2.4402 0.0068 14 1 0.8215 -2.6776 0.1616 15 6 2.7956 -3.4695 -0.1899 16 7 2.4628 -4.7086 0.0588 17 14 4.5127 -3.0694 -0.8071 18 1 5.4083 -2.8168 0.3501 19 1 4.4604 -1.8593 -1.6662 20 1 5.0343 -4.2143 -1.5960 21 1 -0.3632 0.0028 1.0277 22 1 -0.3633 0.8887 -0.5161 23 1 -0.3634 -0.8913 -0.5114 24 1 1.9611 2.1283 0.0004 25 1 5.1160 0.7165 1.9927 26 1 6.5053 0.4911 0.8838 27 1 5.9737 2.7561 2.6528 28 1 7.3631 2.5307 1.5439 29 1 5.4128 4.4688 1.1513 30 1 6.3292 3.7191 -0.1917 31 1 1.5642 -4.9188 0.3577 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260542691.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:08:14 Heat of formation + Delta-G solvation = -4.558713 kcal Electronic energy + Delta-G solvation = -15267.873847 eV Core-core repulsion = 12742.615485 eV Total energy + Delta-G solvation = -2525.258363 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 222.111 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.37618 -38.69116 -33.49684 -32.93440 -31.66451 -29.98566 -28.11542 -26.02351 -24.37526 -22.52178 -20.97487 -19.53932 -18.98039 -17.53231 -16.17529 -15.90899 -14.86827 -14.68664 -14.29963 -13.58104 -13.38700 -13.27105 -12.98368 -12.31868 -12.00951 -11.68914 -11.63234 -11.36728 -11.09655 -10.96925 -10.57403 -10.36259 -10.07069 -9.57963 -9.49416 -8.96538 -8.28780 -7.86072 -7.30945 -7.14052 -4.48183 3.27665 3.64420 3.76142 4.06627 4.18988 4.22969 4.33586 4.54167 4.96022 5.08675 5.22078 5.35437 5.54129 5.58261 5.66903 5.84871 5.89836 5.90983 6.05961 6.10598 6.17820 6.25184 6.31779 6.63808 6.80543 7.21576 7.32871 7.65617 7.79933 8.04951 8.37310 8.75872 8.98375 9.69359 10.24099 Molecular weight = 222.11amu Principal moments of inertia in cm(-1) A = 0.029891 B = 0.010572 C = 0.008257 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 936.509665 B = 2647.959946 C = 3390.062164 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.101 3.899 2 N -0.509 5.509 3 C -0.124 4.124 4 C 0.020 3.980 5 C 0.168 3.832 6 H 0.069 0.931 7 C -0.136 4.136 8 C -0.156 4.156 9 C 0.045 3.955 10 O -0.370 6.370 11 N -0.583 5.583 12 C 0.376 3.624 13 C -0.516 4.516 14 H 0.076 0.924 15 C 0.065 3.935 16 N -0.826 5.826 17 Si 1.120 2.880 18 H -0.283 1.283 19 H -0.265 1.265 20 H -0.322 1.322 21 H 0.050 0.950 22 H 0.063 0.937 23 H 0.074 0.926 24 H 0.146 0.854 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.070 0.930 28 H 0.072 0.928 29 H 0.085 0.915 30 H 0.055 0.945 31 H 0.279 0.721 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.253 11.196 0.880 11.692 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.044 4.044 2 N -0.198 5.198 3 C -0.254 4.254 4 C -0.109 4.109 5 C 0.110 3.890 6 H 0.087 0.913 7 C -0.175 4.175 8 C -0.194 4.194 9 C -0.032 4.032 10 O -0.288 6.288 11 N -0.311 5.311 12 C 0.133 3.867 13 C -0.556 4.556 14 H 0.095 0.905 15 C -0.155 4.155 16 N -0.451 5.451 17 Si 0.950 3.050 18 H -0.210 1.210 19 H -0.191 1.191 20 H -0.254 1.254 21 H 0.069 0.931 22 H 0.082 0.918 23 H 0.093 0.907 24 H 0.164 0.836 25 H 0.096 0.904 26 H 0.094 0.906 27 H 0.089 0.911 28 H 0.090 0.910 29 H 0.104 0.896 30 H 0.073 0.927 31 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 4.938 10.183 0.490 11.328 hybrid contribution -2.377 1.160 0.642 2.721 sum 2.561 11.343 1.132 11.684 Atomic orbital electron populations 1.21467 0.79311 1.02425 1.01154 1.45130 1.05431 1.06730 1.62501 1.21634 0.90505 0.91167 1.22115 1.19647 0.91511 0.91256 1.08519 1.20755 0.91686 0.79585 0.96967 0.91278 1.22841 0.99229 0.96402 0.98980 1.22964 1.00472 0.95811 1.00142 1.23345 0.87311 0.96413 0.96113 1.89118 1.31758 1.20837 1.87088 1.69617 1.18259 1.08729 1.34458 1.20257 0.83338 0.88247 0.94832 1.19305 0.97535 0.87782 1.50934 0.90543 1.27215 1.06677 0.91202 0.90417 1.70631 1.22245 1.20322 1.31882 0.82612 0.71665 0.72784 0.77894 1.20971 1.19073 1.25378 0.93126 0.91843 0.90691 0.83616 0.90353 0.90575 0.91087 0.90978 0.89648 0.92681 0.90996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.86 10.94 59.85 0.65 2.51 16 2 N -0.51 -12.10 3.21 -123.37 -0.40 -12.50 16 3 C -0.12 -2.86 10.96 -16.24 -0.18 -3.04 16 4 C 0.02 0.48 6.20 -82.92 -0.51 -0.03 16 5 C 0.17 3.31 3.85 -27.11 -0.10 3.21 16 6 H 0.07 1.32 8.14 -51.93 -0.42 0.90 16 7 C -0.14 -2.36 6.62 -25.17 -0.17 -2.53 16 8 C -0.16 -2.05 7.09 -25.17 -0.18 -2.23 16 9 C 0.05 0.60 7.63 37.93 0.29 0.89 16 10 O -0.37 -6.67 10.72 -35.23 -0.38 -7.05 16 11 N -0.58 -15.60 6.57 -8.95 -0.06 -15.66 16 12 C 0.38 10.17 7.10 -155.59 -1.10 9.06 16 13 C -0.52 -14.39 9.34 -38.17 -0.36 -14.75 16 14 H 0.08 2.11 7.53 -52.49 -0.40 1.71 16 15 C 0.07 1.83 5.52 -17.29 -0.10 1.74 16 16 N -0.83 -23.25 13.65 55.56 0.76 -22.49 16 17 Si 1.12 28.54 26.32 -169.99 -4.47 24.07 16 18 H -0.28 -7.18 7.11 56.52 0.40 -6.78 16 19 H -0.26 -6.87 6.39 56.52 0.36 -6.51 16 20 H -0.32 -7.99 7.11 56.52 0.40 -7.59 16 21 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 22 H 0.06 0.98 8.14 -51.93 -0.42 0.56 16 23 H 0.07 1.37 7.50 -51.93 -0.39 0.98 16 24 H 0.15 3.03 7.91 -52.49 -0.42 2.61 16 25 H 0.08 1.52 7.86 -51.93 -0.41 1.11 16 26 H 0.08 1.26 8.14 -51.93 -0.42 0.83 16 27 H 0.07 0.88 8.14 -51.93 -0.42 0.46 16 28 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 29 H 0.09 0.95 8.14 -51.92 -0.42 0.53 16 30 H 0.05 0.64 8.14 -51.93 -0.42 0.22 16 31 H 0.28 7.54 8.72 -40.82 -0.36 7.19 16 LS Contribution 260.99 15.07 3.93 3.93 Total: -1.00 -31.29 260.99 -6.55 -37.84 By element: Atomic # 1 Polarization: 1.20 SS G_CDS: -4.18 Total: -2.98 kcal Atomic # 6 Polarization: -3.40 SS G_CDS: -1.75 Total: -5.16 kcal Atomic # 7 Polarization: -50.95 SS G_CDS: 0.30 Total: -50.65 kcal Atomic # 8 Polarization: -6.67 SS G_CDS: -0.38 Total: -7.05 kcal Atomic # 14 Polarization: 28.54 SS G_CDS: -4.47 Total: 24.07 kcal Total LS contribution 3.93 Total: 3.93 kcal Total: -31.29 -6.55 -37.84 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260542691.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.281 kcal (2) G-P(sol) polarization free energy of solvation -31.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.993 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.552 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.559 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds