Wall clock time and date at job start Mon Mar 30 2020 03:06:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 C 1.48558 * 110.99835 * 2 1 4 4 C 1.54377 * 104.59355 * 200.96200 * 3 2 1 5 5 C 1.54258 * 105.06475 * 23.85328 * 4 3 2 6 6 H 1.09005 * 110.32739 * 241.00728 * 5 4 3 7 7 C 1.50696 * 110.32726 * 118.89390 * 5 4 3 8 8 N 1.30803 * 125.15428 * 299.98484 * 7 5 4 9 9 C 1.33332 * 109.25212 * 180.02562 * 8 7 5 10 10 C 1.39417 * 107.08135 * 0.24068 * 9 8 7 11 11 C 1.39854 * 126.87065 * 179.72401 * 10 9 8 12 12 H 1.07991 * 120.00059 * 180.02562 * 11 10 9 13 13 C 1.40171 * 119.99640 * 0.02562 * 11 10 9 14 14 N 1.30795 * 120.00203 * 0.02562 * 13 11 10 15 15 Si 1.86805 * 119.99753 * 180.02562 * 13 11 10 16 16 H 1.48504 * 109.47054 * 60.00279 * 15 13 11 17 17 H 1.48494 * 109.46885 * 180.02562 * 15 13 11 18 18 H 1.48500 * 109.47095 * 300.00138 * 15 13 11 19 19 O 1.34015 * 125.15467 * 120.00109 * 7 5 4 20 20 C 1.48558 * 110.99806 * 244.58152 * 2 1 3 21 21 H 1.08995 * 109.46691 * 59.87368 * 1 2 3 22 22 H 1.08997 * 109.46763 * 179.87028 * 1 2 3 23 23 H 1.08994 * 109.46994 * 299.87352 * 1 2 3 24 24 H 1.08999 * 110.40847 * 82.18408 * 3 2 1 25 25 H 1.08998 * 110.51239 * 319.78724 * 3 2 1 26 26 H 1.09002 * 110.32510 * 264.95524 * 4 3 2 27 27 H 1.09001 * 110.32715 * 142.75291 * 4 3 2 28 28 H 1.08002 * 126.45423 * 179.97438 * 9 8 7 29 29 H 0.96999 * 120.00113 * 179.97438 * 14 13 11 30 30 H 1.09003 * 110.41121 * 40.26433 * 20 2 1 31 31 H 1.08998 * 110.41499 * 277.82073 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0014 1.3869 0.0000 4 6 3.4432 1.2501 -0.5345 5 6 3.4433 -0.0538 -1.3586 6 1 4.1497 -0.7686 -0.9363 7 6 3.7894 0.2356 -2.7964 8 7 3.1097 1.0213 -3.5912 9 6 3.6952 1.0482 -4.7888 10 6 4.8098 0.2136 -4.7186 11 6 5.7167 -0.0635 -5.7465 12 1 6.5463 -0.7316 -5.5691 13 6 5.5487 0.5261 -7.0071 14 7 4.5442 1.3357 -7.2218 15 14 6.7597 0.1554 -8.3803 16 1 6.7566 -1.3025 -8.6628 17 1 6.3632 0.8980 -9.6036 18 1 8.1221 0.5765 -7.9659 19 8 4.8401 -0.2732 -3.4547 20 6 2.0014 -0.5953 -1.2527 21 1 -0.3632 0.5158 -0.8888 22 1 -0.3633 -1.0277 -0.0023 23 1 -0.3633 0.5118 0.8911 24 1 2.0079 1.7916 1.0121 25 1 1.4104 2.0229 -0.6591 26 1 4.1483 1.1749 0.2934 27 1 3.6937 2.0996 -1.1699 28 1 3.3654 1.6074 -5.6519 29 1 4.4282 1.7439 -8.0940 30 1 1.4098 -0.2712 -2.1089 31 1 2.0079 -1.6831 -1.1839 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260933398.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:06:50 Heat of formation + Delta-G solvation = 7.696997 kcal Electronic energy + Delta-G solvation = -14967.473876 eV Core-core repulsion = 12442.746961 eV Total energy + Delta-G solvation = -2524.726915 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 222.111 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -41.02435 -38.40720 -34.08979 -32.95525 -31.99854 -29.26948 -28.28435 -25.86093 -24.25954 -21.36500 -20.86863 -20.65352 -18.88809 -17.57024 -16.03491 -15.48625 -15.30452 -14.65221 -14.18154 -13.97678 -13.55974 -12.96336 -12.51754 -12.24331 -12.05074 -11.48169 -11.35296 -11.32861 -11.20972 -11.04194 -10.81834 -10.66433 -10.30837 -10.17902 -9.63217 -9.44182 -8.70042 -8.29533 -7.29654 -6.92444 -4.55014 2.80454 2.96337 3.00044 3.33586 3.73280 4.18256 4.36469 4.68382 5.01027 5.09080 5.20010 5.43135 5.60073 5.66359 5.76485 5.84703 5.92528 5.95842 6.07024 6.23730 6.31818 6.48366 6.60952 6.86853 7.05038 7.20813 7.21549 7.46186 7.60029 8.17973 8.34484 8.57198 8.70057 9.75237 10.02805 Molecular weight = 222.11amu Principal moments of inertia in cm(-1) A = 0.070715 B = 0.006097 C = 0.005975 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 395.861061 B = 4591.207450 C = 4685.073609 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 N -0.519 5.519 3 C 0.035 3.965 4 C -0.112 4.112 5 C 0.034 3.966 6 H 0.084 0.916 7 C 0.020 3.980 8 N -0.454 5.454 9 C -0.172 4.172 10 C 0.142 3.858 11 C -0.423 4.423 12 H 0.084 0.916 13 C 0.069 3.931 14 N -0.787 5.787 15 Si 0.941 3.059 16 H -0.263 1.263 17 H -0.274 1.274 18 H -0.263 1.263 19 O -0.243 6.243 20 C 0.043 3.957 21 H 0.030 0.970 22 H 0.066 0.934 23 H 0.064 0.936 24 H 0.075 0.925 25 H 0.047 0.953 26 H 0.069 0.931 27 H 0.077 0.923 28 H 0.192 0.808 29 H 0.286 0.714 30 H 0.060 0.940 31 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.833 -0.852 6.656 7.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 N -0.243 5.243 3 C -0.092 4.092 4 C -0.150 4.150 5 C 0.014 3.986 6 H 0.103 0.897 7 C -0.179 4.179 8 N -0.183 5.183 9 C -0.318 4.318 10 C 0.089 3.911 11 C -0.453 4.453 12 H 0.102 0.898 13 C -0.149 4.149 14 N -0.414 5.414 15 Si 0.764 3.236 16 H -0.187 1.187 17 H -0.199 1.199 18 H -0.187 1.187 19 O -0.134 6.134 20 C -0.085 4.085 21 H 0.048 0.952 22 H 0.084 0.916 23 H 0.083 0.917 24 H 0.094 0.906 25 H 0.066 0.934 26 H 0.087 0.913 27 H 0.095 0.905 28 H 0.209 0.791 29 H 0.097 0.903 30 H 0.078 0.922 31 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -3.317 -0.736 7.232 7.990 hybrid contribution 0.783 -0.019 -1.689 1.862 sum -2.535 -0.755 5.542 6.141 Atomic orbital electron populations 1.22471 0.88511 1.01835 1.00637 1.65393 1.07865 1.15631 1.35396 1.23078 0.95759 0.90093 1.00318 1.22357 0.95941 0.97990 0.98753 1.19571 0.96114 0.97050 0.85887 0.89746 1.24404 0.91055 1.05851 0.96550 1.69497 1.29043 1.16324 1.03419 1.24136 0.99469 1.12362 0.95853 1.20726 0.96625 0.93216 0.80561 1.18348 1.09207 1.25249 0.92506 0.89809 1.25846 0.96248 0.93257 0.99583 1.69575 1.25892 1.21605 1.24366 0.85829 0.79960 0.79645 0.78165 1.18708 1.19904 1.18709 1.84310 1.44829 1.60798 1.23498 1.23193 0.94756 0.99436 0.91112 0.95158 0.91563 0.91670 0.90638 0.93436 0.91260 0.90464 0.79141 0.90269 0.92173 0.90397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.19 9.53 60.07 0.57 0.76 16 2 N -0.52 -8.00 5.66 -238.23 -1.35 -9.35 16 3 C 0.04 0.54 6.49 -2.18 -0.01 0.52 16 4 C -0.11 -1.90 6.64 -25.35 -0.17 -2.07 16 5 C 0.03 0.66 3.59 -90.39 -0.32 0.34 16 6 H 0.08 1.53 8.14 -51.93 -0.42 1.11 16 7 C 0.02 0.51 6.62 -12.72 -0.08 0.43 16 8 N -0.45 -12.21 10.91 -10.02 -0.11 -12.32 16 9 C -0.17 -4.95 10.89 -16.46 -0.18 -5.13 16 10 C 0.14 4.08 7.08 -38.54 -0.27 3.81 16 11 C -0.42 -11.49 9.45 -38.25 -0.36 -11.85 16 12 H 0.08 2.15 7.85 -52.49 -0.41 1.74 16 13 C 0.07 1.71 5.50 -17.27 -0.09 1.61 16 14 N -0.79 -20.13 10.32 55.56 0.57 -19.56 16 15 Si 0.94 18.30 29.56 -169.99 -5.03 13.27 16 16 H -0.26 -5.03 7.11 56.52 0.40 -4.62 16 17 H -0.27 -5.12 7.11 56.52 0.40 -4.72 16 18 H -0.26 -5.02 7.11 56.52 0.40 -4.62 16 19 O -0.24 -6.71 10.81 3.12 0.03 -6.67 16 20 C 0.04 0.76 6.03 -2.18 -0.01 0.75 16 21 H 0.03 0.41 7.97 -51.93 -0.41 -0.01 16 22 H 0.07 0.78 8.14 -51.93 -0.42 0.35 16 23 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 24 H 0.08 0.97 8.14 -51.93 -0.42 0.55 16 25 H 0.05 0.76 7.97 -51.93 -0.41 0.34 16 26 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 27 H 0.08 1.47 7.70 -51.93 -0.40 1.07 16 28 H 0.19 5.57 5.76 -52.49 -0.30 5.26 16 29 H 0.29 6.53 8.30 -40.82 -0.34 6.20 16 30 H 0.06 1.19 7.37 -51.93 -0.38 0.81 16 31 H 0.08 1.27 8.14 -51.93 -0.42 0.85 16 LS Contribution 262.16 15.07 3.95 3.95 Total: -1.00 -29.43 262.16 -6.86 -36.29 By element: Atomic # 1 Polarization: 9.20 SS G_CDS: -4.00 Total: 5.21 kcal Atomic # 6 Polarization: -9.89 SS G_CDS: -0.94 Total: -10.83 kcal Atomic # 7 Polarization: -40.34 SS G_CDS: -0.88 Total: -41.22 kcal Atomic # 8 Polarization: -6.71 SS G_CDS: 0.03 Total: -6.67 kcal Atomic # 14 Polarization: 18.30 SS G_CDS: -5.03 Total: 13.27 kcal Total LS contribution 3.95 Total: 3.95 kcal Total: -29.43 -6.86 -36.29 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260933398.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.991 kcal (2) G-P(sol) polarization free energy of solvation -29.433 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.294 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds