Wall clock time and date at job start Mon Mar 30 2020 03:06:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.48670 * 111.10904 * 2 1 4 4 C 1.54384 * 104.67119 * 201.09884 * 3 2 1 5 5 C 1.54258 * 105.05937 * 23.77194 * 4 3 2 6 6 C 1.48566 * 110.99956 * 244.58270 * 2 1 3 7 7 H 1.08994 * 110.41237 * 40.13735 * 6 2 1 8 8 C 1.50705 * 110.41034 * 277.81973 * 6 2 1 9 9 N 1.30802 * 125.15098 * 318.07450 * 8 6 2 10 10 C 1.33326 * 109.25108 * 179.69935 * 9 8 6 11 11 C 1.39419 * 107.08363 * 0.43859 * 10 9 8 12 12 C 1.39843 * 126.87313 * 179.83700 * 11 10 9 13 13 H 1.08003 * 120.00145 * 199.22303 * 12 11 10 14 14 C 1.40168 * 120.00256 * 19.22106 * 12 11 10 15 15 N 1.30801 * 120.00199 * 196.41323 * 14 12 11 16 16 Si 1.86801 * 119.99773 * 16.69298 * 14 12 11 17 17 H 1.48493 * 109.46946 * 269.72208 * 16 14 12 18 18 H 1.48499 * 109.46883 * 29.72489 * 16 14 12 19 19 H 1.48498 * 109.46961 * 149.72340 * 16 14 12 20 20 O 1.34007 * 125.15257 * 138.05121 * 8 6 2 21 21 H 1.08997 * 109.47346 * 175.41782 * 1 2 3 22 22 H 1.09003 * 109.46898 * 295.41891 * 1 2 3 23 23 H 1.09000 * 109.47170 * 55.41616 * 1 2 3 24 24 H 1.08995 * 110.44613 * 82.26311 * 3 2 1 25 25 H 1.09003 * 110.40558 * 319.91278 * 3 2 1 26 26 H 1.08996 * 110.32287 * 264.87440 * 4 3 2 27 27 H 1.09005 * 110.32381 * 142.66518 * 4 3 2 28 28 H 1.09004 * 110.32296 * 241.10268 * 5 4 3 29 29 H 1.09006 * 110.41289 * 118.93794 * 5 4 3 30 30 H 1.08003 * 126.46401 * 180.27180 * 10 9 8 31 31 H 0.97004 * 119.99953 * 355.30645 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 2.0044 1.3869 0.0000 4 6 3.4451 1.2499 -0.5376 5 6 3.4431 -0.0541 -1.3617 6 6 2.0014 -0.5953 -1.2527 7 1 1.4086 -0.2730 -2.1087 8 6 2.0103 -2.0993 -1.1575 9 7 2.3732 -2.7851 -0.1044 10 6 2.2522 -4.0871 -0.3646 11 6 1.7908 -4.2017 -1.6752 12 6 1.5236 -5.3854 -2.3703 13 1 1.4722 -5.3784 -3.4490 14 6 1.3226 -6.5811 -1.6669 15 7 1.3927 -7.7276 -2.2925 16 14 0.9468 -6.5367 0.1624 17 1 2.2165 -6.5956 0.9301 18 1 0.2282 -5.2790 0.4896 19 1 0.0968 -7.7002 0.5214 20 8 1.6473 -2.9367 -2.1387 21 1 -0.3634 -1.0243 -0.0821 22 1 -0.3633 0.4411 0.9282 23 1 -0.3633 0.5833 -0.8461 24 1 2.0133 1.7917 1.0120 25 1 1.4122 2.0230 -0.6579 26 1 4.1520 1.1745 0.2886 27 1 3.6943 2.0993 -1.1737 28 1 4.1490 -0.7696 -0.9399 29 1 3.6918 0.1535 -2.4025 30 1 2.4729 -4.9000 0.3114 31 1 1.5160 -7.7485 -3.2545 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260972312.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:06:36 Heat of formation + Delta-G solvation = 9.610106 kcal Electronic energy + Delta-G solvation = -15205.268232 eV Core-core repulsion = 12680.624276 eV Total energy + Delta-G solvation = -2524.643957 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 222.111 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.30563 -38.53706 -34.07691 -32.98941 -31.95267 -30.51106 -28.47469 -25.48631 -24.10871 -21.84401 -20.88150 -20.70749 -19.18521 -18.35184 -16.47726 -15.59449 -15.08240 -14.75833 -14.16351 -13.77137 -13.55673 -13.45972 -13.29328 -12.58236 -12.08474 -11.56532 -11.51106 -11.45462 -11.16687 -11.01260 -10.89581 -10.34642 -10.24172 -9.90938 -9.52071 -9.33423 -8.87340 -8.22382 -7.76534 -7.43213 -4.74259 2.79895 3.19619 3.36530 3.54318 3.87220 3.93318 4.10766 4.64807 4.88328 4.92472 4.97598 5.15302 5.38594 5.56825 5.59090 5.62506 5.74380 5.89042 5.97402 6.04053 6.15673 6.27988 6.49364 6.59821 6.81386 7.08858 7.17844 7.31388 7.38614 7.92553 8.01159 8.10136 8.43091 9.46421 9.80696 Molecular weight = 222.11amu Principal moments of inertia in cm(-1) A = 0.049930 B = 0.007804 C = 0.007425 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 560.645677 B = 3587.075246 C = 3770.065058 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 N -0.494 5.494 3 C 0.033 3.967 4 C -0.121 4.121 5 C -0.115 4.115 6 C 0.188 3.812 7 H 0.059 0.941 8 C 0.038 3.962 9 N -0.408 5.408 10 C -0.242 4.242 11 C 0.160 3.840 12 C -0.491 4.491 13 H 0.084 0.916 14 C 0.058 3.942 15 N -0.798 5.798 16 Si 1.075 2.925 17 H -0.271 1.271 18 H -0.259 1.259 19 H -0.287 1.287 20 O -0.241 6.241 21 H 0.071 0.929 22 H 0.067 0.933 23 H 0.024 0.976 24 H 0.081 0.919 25 H 0.040 0.960 26 H 0.073 0.927 27 H 0.066 0.934 28 H 0.080 0.920 29 H 0.068 0.932 30 H 0.155 0.845 31 H 0.290 0.710 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.085 12.433 2.206 12.628 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 N -0.219 5.219 3 C -0.095 4.095 4 C -0.159 4.159 5 C -0.154 4.154 6 C 0.079 3.921 7 H 0.077 0.923 8 C -0.163 4.163 9 N -0.135 5.135 10 C -0.386 4.386 11 C 0.106 3.894 12 C -0.520 4.520 13 H 0.102 0.898 14 C -0.164 4.164 15 N -0.421 5.421 16 Si 0.900 3.100 17 H -0.197 1.197 18 H -0.184 1.184 19 H -0.214 1.214 20 O -0.132 6.132 21 H 0.090 0.910 22 H 0.086 0.914 23 H 0.042 0.958 24 H 0.099 0.901 25 H 0.059 0.941 26 H 0.091 0.909 27 H 0.084 0.916 28 H 0.099 0.901 29 H 0.087 0.913 30 H 0.172 0.828 31 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.004 11.466 4.422 12.289 hybrid contribution -0.274 0.831 -2.944 3.071 sum -0.269 12.298 1.478 12.389 Atomic orbital electron populations 1.22466 0.87932 1.02412 1.00195 1.65087 1.08019 1.13823 1.34952 1.23113 0.95339 0.90028 1.00990 1.22272 0.96677 0.97250 0.99713 1.22357 0.96255 0.96953 0.99855 1.20170 0.95815 0.84918 0.91220 0.92321 1.24113 1.15225 0.92607 0.84356 1.69363 1.13782 1.04035 1.26352 1.22921 1.24518 0.93113 0.98002 1.20801 0.93895 0.81992 0.92747 1.19536 1.46065 0.90115 0.96298 0.89827 1.27191 0.90228 0.90058 1.08924 1.70579 1.31390 1.26959 1.13158 0.83587 0.78369 0.76644 0.71370 1.19736 1.18366 1.21380 1.84387 1.70072 1.16579 1.42168 0.91049 0.91405 0.95796 0.90108 0.94147 0.90870 0.91573 0.90086 0.91345 0.82814 0.89873 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.29 9.45 60.07 0.57 0.86 16 2 N -0.49 -8.50 5.31 -231.62 -1.23 -9.73 16 3 C 0.03 0.43 6.50 -2.12 -0.01 0.42 16 4 C -0.12 -1.52 7.00 -25.35 -0.18 -1.69 16 5 C -0.12 -1.83 6.54 -25.35 -0.17 -2.00 16 6 C 0.19 3.53 2.82 -67.22 -0.19 3.34 16 7 H 0.06 1.04 7.97 -51.93 -0.41 0.63 16 8 C 0.04 0.92 6.80 -12.71 -0.09 0.84 16 9 N -0.41 -10.68 11.20 -10.02 -0.11 -10.79 16 10 C -0.24 -6.53 9.33 -16.46 -0.15 -6.69 16 11 C 0.16 4.43 6.63 -38.54 -0.26 4.18 16 12 C -0.49 -13.61 9.81 -38.26 -0.38 -13.98 16 13 H 0.08 2.35 8.06 -52.48 -0.42 1.93 16 14 C 0.06 1.52 5.51 -17.27 -0.10 1.42 16 15 N -0.80 -20.99 13.65 55.56 0.76 -20.24 16 16 Si 1.07 24.70 24.94 -169.99 -4.24 20.46 16 17 H -0.27 -5.97 6.61 56.52 0.37 -5.60 16 18 H -0.26 -6.13 6.69 56.52 0.38 -5.76 16 19 H -0.29 -6.23 7.11 56.52 0.40 -5.83 16 20 O -0.24 -6.44 10.81 3.11 0.03 -6.41 16 21 H 0.07 1.28 7.96 -51.93 -0.41 0.87 16 22 H 0.07 0.90 8.14 -51.93 -0.42 0.48 16 23 H 0.02 0.32 7.98 -51.93 -0.41 -0.09 16 24 H 0.08 0.95 8.14 -51.93 -0.42 0.53 16 25 H 0.04 0.47 7.91 -51.93 -0.41 0.05 16 26 H 0.07 0.90 8.14 -51.93 -0.42 0.47 16 27 H 0.07 0.67 8.14 -51.93 -0.42 0.24 16 28 H 0.08 1.46 7.85 -51.93 -0.41 1.05 16 29 H 0.07 0.96 8.14 -51.93 -0.42 0.53 16 30 H 0.15 3.99 4.32 -52.48 -0.23 3.76 16 31 H 0.29 7.34 8.73 -40.82 -0.36 6.99 16 LS Contribution 258.19 15.07 3.89 3.89 Total: -1.00 -30.00 258.19 -5.87 -35.87 By element: Atomic # 1 Polarization: 4.28 SS G_CDS: -4.03 Total: 0.26 kcal Atomic # 6 Polarization: -12.36 SS G_CDS: -0.94 Total: -13.31 kcal Atomic # 7 Polarization: -40.17 SS G_CDS: -0.58 Total: -40.76 kcal Atomic # 8 Polarization: -6.44 SS G_CDS: 0.03 Total: -6.41 kcal Atomic # 14 Polarization: 24.70 SS G_CDS: -4.24 Total: 20.46 kcal Total LS contribution 3.89 Total: 3.89 kcal Total: -30.00 -5.87 -35.87 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260972312.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.479 kcal (2) G-P(sol) polarization free energy of solvation -29.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.480 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.869 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds