Wall clock time and date at job start Mon Mar 30 2020 03:06:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 N 1.40070 * 126.03597 * 2 1 4 4 C 1.30837 * 108.34423 * 179.76481 * 3 2 1 5 5 C 1.50695 * 125.86110 * 180.23798 * 4 3 2 6 6 C 1.53007 * 117.49514 * 8.81297 * 5 4 3 7 7 C 1.52997 * 117.49682 * 300.19376 * 5 4 3 8 8 C 1.39820 * 108.27537 * 0.40302 * 4 3 2 9 9 C 1.50700 * 126.07570 * 179.85956 * 8 4 3 10 10 C 1.50702 * 109.46869 * 269.70926 * 9 8 4 11 11 H 1.08002 * 120.00299 * 0.02562 * 10 9 8 12 12 C 1.37884 * 119.99942 * 179.72213 * 10 9 8 13 13 N 1.31514 * 119.99698 * 0.28408 * 12 10 9 14 14 Si 1.86794 * 119.99837 * 180.27476 * 12 10 9 15 15 H 1.48504 * 109.47196 * 60.00645 * 14 12 10 16 16 H 1.48504 * 109.46887 * 180.02562 * 14 12 10 17 17 H 1.48502 * 109.47679 * 300.00280 * 14 12 10 18 18 C 1.35136 * 126.03940 * 180.02562 * 2 1 3 19 19 O 1.35756 * 126.19157 * 0.02562 * 18 2 1 20 20 H 1.09002 * 109.47155 * 269.97101 * 1 2 3 21 21 H 1.08996 * 109.47466 * 29.97523 * 1 2 3 22 22 H 1.09003 * 109.47047 * 149.97946 * 1 2 3 23 23 H 1.08995 * 115.55355 * 154.52126 * 5 4 3 24 24 H 1.08994 * 117.50345 * 0.02562 * 6 5 4 25 25 H 1.09005 * 117.49054 * 145.02377 * 6 5 4 26 26 H 1.09006 * 117.49982 * 214.97459 * 7 5 4 27 27 H 1.09002 * 117.50198 * 359.97438 * 7 5 4 28 28 H 1.09004 * 109.47210 * 149.71219 * 9 8 4 29 29 H 1.08994 * 109.47551 * 29.70871 * 9 8 4 30 30 H 0.97005 * 119.99651 * 179.97438 * 13 12 10 31 31 H 0.96697 * 114.00620 * 269.96136 * 19 18 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2890 1.1327 0.0000 4 6 3.5355 0.7351 0.0051 5 6 4.7476 1.6303 0.0120 6 6 4.5181 3.1285 0.2212 7 6 4.9157 2.6008 -1.1587 8 6 3.5497 -0.6631 -0.0008 9 6 4.7768 -1.5380 -0.0009 10 6 5.1858 -1.8294 -1.4217 11 1 4.6147 -1.4215 -2.2426 12 6 6.2929 -2.6117 -1.6738 13 7 6.9886 -3.1081 -0.6742 14 14 6.8044 -2.9665 -3.4349 15 1 7.1020 -1.6889 -4.1310 16 1 8.0163 -3.8248 -3.4350 17 1 5.7013 -3.6685 -4.1390 18 6 2.2600 -1.0927 -0.0005 19 8 1.8457 -2.3855 -0.0016 20 1 -0.3633 -0.0005 1.0277 21 1 -0.3634 0.8902 -0.5134 22 1 -0.3633 -0.8898 -0.5142 23 1 5.6513 1.1949 0.4385 24 1 3.4905 3.4666 0.3543 25 1 5.2709 3.6789 0.7856 26 1 5.9301 2.8042 -1.5022 27 1 4.1498 2.5915 -1.9342 28 1 4.5558 -2.4737 0.5128 29 1 5.5893 -1.0244 0.5130 30 1 7.7673 -3.6587 -0.8515 31 1 1.7259 -2.7610 0.8815 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260985792.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:06:52 Heat of formation + Delta-G solvation = 56.765361 kcal Electronic energy + Delta-G solvation = -15056.729772 eV Core-core repulsion = 12534.130620 eV Total energy + Delta-G solvation = -2522.599151 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 222.111 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -40.77571 -37.10301 -36.06739 -33.53930 -32.23295 -29.89921 -27.32244 -25.80879 -23.03390 -22.24768 -21.92632 -20.07761 -18.77104 -17.24439 -16.30048 -15.82951 -15.23907 -14.66987 -14.41418 -13.99661 -13.40239 -13.00761 -12.51025 -12.29978 -11.95274 -11.64735 -11.24668 -11.12572 -11.05901 -10.67619 -10.54109 -10.24264 -10.12592 -9.71912 -9.41807 -9.29886 -8.35171 -8.28532 -7.37294 -5.90635 -3.91778 2.27645 2.86302 3.31957 3.39943 3.43070 3.48935 4.44846 4.52969 4.57124 4.96078 5.17004 5.33374 5.35596 5.43659 5.51728 5.56193 5.67659 6.00936 6.21916 6.31787 6.36619 6.54185 6.64900 6.81458 7.12193 7.35895 7.67735 7.81025 8.05376 8.16693 8.34260 8.51410 9.11380 9.70234 11.18876 Molecular weight = 222.11amu Principal moments of inertia in cm(-1) A = 0.022647 B = 0.010265 C = 0.007982 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1236.077511 B = 2727.143607 C = 3507.145990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.108 3.892 2 N -0.397 5.397 3 N -0.295 5.295 4 C 0.112 3.888 5 C -0.063 4.063 6 C -0.176 4.176 7 C -0.160 4.160 8 C -0.177 4.177 9 C 0.092 3.908 10 C -0.496 4.496 11 H 0.052 0.948 12 C 0.057 3.943 13 N -0.899 5.899 14 Si 0.891 3.109 15 H -0.277 1.277 16 H -0.288 1.288 17 H -0.278 1.278 18 C 0.228 3.772 19 O -0.457 6.457 20 H 0.064 0.936 21 H 0.081 0.919 22 H 0.082 0.918 23 H 0.127 0.873 24 H 0.096 0.904 25 H 0.093 0.907 26 H 0.097 0.903 27 H 0.091 0.909 28 H 0.022 0.978 29 H 0.028 0.972 30 H 0.260 0.740 31 H 0.384 0.616 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.845 7.112 3.265 11.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.034 4.034 2 N -0.192 5.192 3 N -0.122 5.122 4 C -0.052 4.052 5 C -0.083 4.083 6 C -0.214 4.214 7 C -0.198 4.198 8 C -0.188 4.188 9 C 0.054 3.946 10 C -0.535 4.535 11 H 0.070 0.930 12 C -0.144 4.144 13 N -0.539 5.539 14 Si 0.719 3.281 15 H -0.203 1.203 16 H -0.214 1.214 17 H -0.204 1.204 18 C 0.062 3.938 19 O -0.258 6.258 20 H 0.082 0.918 21 H 0.100 0.900 22 H 0.100 0.900 23 H 0.145 0.855 24 H 0.114 0.886 25 H 0.111 0.889 26 H 0.116 0.884 27 H 0.109 0.891 28 H 0.041 0.959 29 H 0.046 0.954 30 H 0.070 0.930 31 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -9.621 7.892 2.687 12.730 hybrid contribution 0.542 -1.235 -0.531 1.450 sum -9.078 6.656 2.156 11.462 Atomic orbital electron populations 1.21613 0.75695 1.03867 1.02250 1.48658 1.05870 1.03841 1.60790 1.77133 1.01265 1.06094 1.27661 1.20985 0.91587 0.93112 0.99477 1.20224 0.95294 0.88673 1.04134 1.22964 1.02571 0.95891 0.99955 1.22893 1.02559 1.02766 0.91620 1.20574 0.94960 0.93776 1.09498 1.17594 0.87427 0.92287 0.97248 1.21045 1.10565 1.30038 0.91838 0.93015 1.24962 0.96501 0.96048 0.96851 1.69942 1.18565 1.34918 1.30485 0.86675 0.77794 0.78240 0.85417 1.20262 1.21361 1.20401 1.18470 0.88636 0.80101 1.06570 1.84927 1.88547 1.19585 1.32750 0.91795 0.89980 0.89980 0.85490 0.88568 0.88860 0.88423 0.89057 0.95934 0.95426 0.93049 0.76124 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 1.37 11.42 59.84 0.68 2.05 16 2 N -0.40 -7.34 4.02 -68.29 -0.27 -7.61 16 3 N -0.30 -5.90 12.14 33.66 0.41 -5.49 16 4 C 0.11 2.38 6.75 -82.43 -0.56 1.82 16 5 C -0.06 -1.17 6.01 -91.77 -0.55 -1.72 16 6 C -0.18 -2.63 10.14 -26.73 -0.27 -2.90 16 7 C -0.16 -2.61 10.23 -26.73 -0.27 -2.88 16 8 C -0.18 -4.10 5.31 -104.85 -0.56 -4.66 16 9 C 0.09 2.44 5.24 -29.03 -0.15 2.29 16 10 C -0.50 -14.39 9.09 -34.44 -0.31 -14.70 16 11 H 0.05 1.53 7.74 -52.49 -0.41 1.13 16 12 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 13 N -0.90 -26.88 13.29 55.43 0.74 -26.14 16 14 Si 0.89 22.21 29.54 -169.99 -5.02 17.19 16 15 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 16 H -0.29 -7.04 7.11 56.52 0.40 -6.64 16 17 H -0.28 -6.91 7.11 56.52 0.40 -6.51 16 18 C 0.23 4.72 7.92 -16.92 -0.13 4.59 16 19 O -0.46 -8.48 13.53 -18.98 -0.26 -8.73 16 20 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 21 H 0.08 0.94 8.14 -51.93 -0.42 0.52 16 22 H 0.08 0.94 8.14 -51.93 -0.42 0.52 16 23 H 0.13 2.39 7.51 -51.93 -0.39 2.00 16 24 H 0.10 1.46 7.89 -51.93 -0.41 1.05 16 25 H 0.09 1.17 8.14 -51.93 -0.42 0.75 16 26 H 0.10 1.43 8.14 -51.93 -0.42 1.01 16 27 H 0.09 1.55 8.14 -51.93 -0.42 1.12 16 28 H 0.02 0.62 8.14 -51.93 -0.42 0.20 16 29 H 0.03 0.75 7.44 -51.93 -0.39 0.36 16 30 H 0.26 7.37 8.31 -40.82 -0.34 7.03 16 31 H 0.38 5.01 9.06 45.56 0.41 5.43 16 LS Contribution 276.35 15.07 4.16 4.16 Total: -1.00 -33.63 276.35 -5.74 -39.37 By element: Atomic # 1 Polarization: 5.10 SS G_CDS: -3.27 Total: 1.82 kcal Atomic # 6 Polarization: -12.35 SS G_CDS: -2.22 Total: -14.57 kcal Atomic # 7 Polarization: -40.11 SS G_CDS: 0.87 Total: -39.24 kcal Atomic # 8 Polarization: -8.48 SS G_CDS: -0.26 Total: -8.73 kcal Atomic # 14 Polarization: 22.21 SS G_CDS: -5.02 Total: 17.19 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -33.63 -5.74 -39.37 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260985792.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.136 kcal (2) G-P(sol) polarization free energy of solvation -33.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.503 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.737 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.370 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds