Wall clock time and date at job start Mon Mar 30 2020 03:15:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43196 * 179.97438 * 2 1 4 4 C 1.39810 * 120.20519 * 164.53162 * 3 2 1 5 5 Cl 1.73604 * 120.06324 * 359.97023 * 4 3 2 6 6 C 1.38016 * 119.88093 * 179.71760 * 4 3 2 7 7 C 1.38502 * 120.30343 * 0.55667 * 6 4 3 8 8 C 1.38092 * 120.42565 * 359.71387 * 7 6 4 9 9 C 1.38769 * 120.11375 * 0.02562 * 8 7 6 10 10 O 1.35553 * 120.15382 * 180.02562 * 9 8 7 11 11 C 1.34813 * 117.00082 * 354.40005 * 10 9 8 12 12 H 1.07999 * 119.99872 * 5.06099 * 11 10 9 13 13 C 1.38686 * 120.00000 * 185.06539 * 11 10 9 14 14 N 1.31532 * 119.99834 * 180.02562 * 13 11 10 15 15 Si 1.86797 * 120.00013 * 359.97438 * 13 11 10 16 16 H 1.48496 * 109.46979 * 89.99992 * 15 13 11 17 17 H 1.48501 * 109.47164 * 209.99910 * 15 13 11 18 18 H 1.48497 * 109.47126 * 330.00246 * 15 13 11 19 19 H 1.07996 * 119.84995 * 180.29358 * 6 4 3 20 20 H 1.07995 * 119.78631 * 179.70117 * 7 6 4 21 21 H 1.08000 * 119.94377 * 179.97438 * 8 7 6 22 22 H 0.96999 * 119.99399 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2708 1.1655 -0.3223 5 17 2.4092 2.6178 -0.7251 6 6 4.6510 1.1601 -0.3145 7 6 5.3436 0.0027 0.0000 8 6 4.6622 -1.1564 0.3148 9 6 3.2745 -1.1693 0.3176 10 8 2.6048 -2.3065 0.6269 11 6 3.3418 -3.4205 0.8092 12 1 4.4201 -3.3641 0.7881 13 6 2.7153 -4.6390 1.0238 14 7 3.4344 -5.7259 1.2022 15 14 0.8502 -4.7366 1.0610 16 1 0.3409 -4.9977 -0.3092 17 1 0.4301 -5.8384 1.9636 18 1 0.2972 -3.4512 1.5581 19 1 5.1934 2.0615 -0.5589 20 1 6.4235 0.0067 -0.0012 21 1 5.2101 -2.0546 0.5584 22 1 2.9961 -6.5781 1.3519 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000090825037.mol2 22 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 03:15:53 Heat of formation + Delta-G solvation = 17.805079 kcal Electronic energy + Delta-G solvation = -12236.037697 eV Core-core repulsion = 9783.073415 eV Total energy + Delta-G solvation = -2452.964282 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 223.014 amu Computer time = 0.15 seconds Orbital eigenvalues (eV) -39.70933 -37.37787 -36.02693 -35.73033 -32.73658 -30.81774 -29.51384 -25.68395 -23.46728 -21.77621 -18.97888 -18.30149 -16.88344 -15.47016 -15.10297 -14.57151 -14.34958 -14.15110 -13.13249 -13.00777 -12.69661 -12.49338 -12.29242 -12.17650 -11.48163 -11.24634 -11.18923 -10.82767 -10.76301 -10.40382 -9.78779 -9.15052 -8.49088 -7.81395 -6.72361 -4.39886 1.16489 1.75092 2.23331 3.08881 3.14473 3.29205 3.30649 3.47120 4.03504 4.24080 4.39208 4.48845 4.81612 5.30513 5.55493 5.68878 5.85787 6.00696 6.40834 6.60556 6.79873 7.04977 7.39766 7.66723 8.11664 8.59739 9.13697 10.32537 Molecular weight = 223.01amu Principal moments of inertia in cm(-1) A = 0.036837 B = 0.009495 C = 0.007575 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 759.918882 B = 2948.065291 C = 3695.417493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.441 5.441 2 C 0.278 3.722 3 C -0.116 4.116 4 C 0.057 3.943 5 Cl -0.072 7.072 6 C -0.199 4.199 7 C -0.037 4.037 8 C -0.212 4.212 9 C 0.203 3.797 10 O -0.189 6.189 11 C -0.396 4.396 12 H 0.117 0.883 13 C 0.075 3.925 14 N -0.858 5.858 15 Si 0.898 3.102 16 H -0.269 1.269 17 H -0.276 1.276 18 H -0.256 1.256 19 H 0.130 0.870 20 H 0.130 0.870 21 H 0.149 0.851 22 H 0.286 0.714 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.958 9.765 -2.179 10.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.119 5.119 2 C -0.036 4.036 3 C -0.122 4.122 4 C 0.027 3.973 5 Cl -0.043 7.043 6 C -0.219 4.219 7 C -0.056 4.056 8 C -0.231 4.231 9 C 0.144 3.856 10 O -0.090 6.090 11 C -0.470 4.470 12 H 0.134 0.866 13 C -0.133 4.133 14 N -0.492 5.492 15 Si 0.722 3.278 16 H -0.194 1.194 17 H -0.201 1.201 18 H -0.180 1.180 19 H 0.148 0.852 20 H 0.148 0.852 21 H 0.166 0.834 22 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.875 9.527 -2.119 9.939 hybrid contribution -0.217 -0.180 0.025 0.283 sum 1.658 9.348 -2.094 9.722 Atomic orbital electron populations 1.81073 1.12016 1.08012 1.10795 1.25179 0.92244 0.93138 0.93043 1.14782 0.84491 0.93305 1.19617 1.20407 0.91977 0.85556 0.99335 1.98354 1.77595 1.36307 1.92059 1.20499 0.90804 0.99878 1.10670 1.20959 0.99627 0.91251 0.93777 1.21332 0.93041 1.00419 1.08341 1.18721 0.90332 0.85607 0.90925 1.83545 1.36839 1.15280 1.73343 1.20884 0.92740 0.82397 1.51026 0.86623 1.24487 1.00645 0.93448 0.94687 1.69608 1.36972 0.99222 1.43391 0.86267 0.82963 0.79284 0.79240 1.19358 1.20130 1.17973 0.85195 0.85243 0.83373 0.90371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -9.83 18.54 41.84 0.78 -9.06 14 2 C 0.28 5.87 13.93 -22.47 -0.31 5.56 14 3 C -0.12 -2.24 5.76 -106.60 -0.61 -2.86 14 4 C 0.06 0.92 6.35 -39.07 -0.25 0.67 14 5 Cl -0.07 -1.07 28.03 -51.86 -1.45 -2.53 14 6 C -0.20 -2.76 9.81 -39.57 -0.39 -3.15 14 7 C -0.04 -0.52 10.03 -39.54 -0.40 -0.92 14 8 C -0.21 -3.76 9.16 -39.44 -0.36 -4.12 14 9 C 0.20 4.21 6.65 -38.60 -0.26 3.96 14 10 O -0.19 -4.63 8.02 0.70 0.01 -4.62 14 11 C -0.40 -10.12 9.95 30.90 0.31 -9.82 14 12 H 0.12 2.89 5.44 -52.49 -0.29 2.61 14 13 C 0.07 1.95 5.49 -17.51 -0.10 1.85 14 14 N -0.86 -22.87 13.96 55.48 0.77 -22.10 14 15 Si 0.90 21.04 28.62 -169.99 -4.86 16.18 14 16 H -0.27 -6.26 7.11 56.52 0.40 -5.86 14 17 H -0.28 -6.17 7.11 56.52 0.40 -5.77 14 18 H -0.26 -6.28 7.11 56.52 0.40 -5.88 14 19 H 0.13 1.44 8.06 -52.49 -0.42 1.02 14 20 H 0.13 1.37 8.06 -52.49 -0.42 0.95 14 21 H 0.15 2.67 5.64 -52.49 -0.30 2.38 14 22 H 0.29 7.05 8.31 -40.82 -0.34 6.71 14 LS Contribution 231.10 15.07 3.48 3.48 Total: -1.00 -27.09 231.10 -4.21 -31.30 By element: Atomic # 1 Polarization: -3.28 SS G_CDS: -0.56 Total: -3.84 kcal Atomic # 6 Polarization: -6.46 SS G_CDS: -2.37 Total: -8.82 kcal Atomic # 7 Polarization: -32.70 SS G_CDS: 1.55 Total: -31.15 kcal Atomic # 8 Polarization: -4.63 SS G_CDS: 0.01 Total: -4.62 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -4.86 Total: 16.18 kcal Atomic # 17 Polarization: -1.07 SS G_CDS: -1.45 Total: -2.53 kcal Total LS contribution 3.48 Total: 3.48 kcal Total: -27.09 -4.21 -31.30 kcal The number of atoms in the molecule is 22 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000090825037.mol2 22 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.106 kcal (2) G-P(sol) polarization free energy of solvation -27.094 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.012 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.301 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.15 seconds