Wall clock time and date at job start Mon Mar 30 2020 02:57:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 C 1.50698 * 109.47416 * 260.39912 * 3 2 1 5 5 H 1.07998 * 120.00218 * 240.00166 * 4 3 2 6 6 C 1.37875 * 120.00046 * 59.99513 * 4 3 2 7 7 N 1.31518 * 119.99944 * 0.02562 * 6 4 3 8 8 Si 1.86801 * 120.00270 * 180.02562 * 6 4 3 9 9 H 1.48499 * 109.47168 * 90.00235 * 8 6 4 10 10 H 1.48493 * 109.47486 * 210.00418 * 8 6 4 11 11 H 1.48500 * 109.46799 * 330.00563 * 8 6 4 12 12 C 1.53002 * 109.47253 * 20.39595 * 3 2 1 13 13 C 1.52997 * 109.47415 * 180.02562 * 12 3 2 14 14 C 1.53006 * 109.47164 * 300.00027 * 13 12 3 15 15 C 1.52999 * 109.46626 * 59.99702 * 14 13 12 16 16 H 1.09000 * 109.47160 * 60.00369 * 15 14 13 17 17 C 1.50706 * 109.46957 * 180.02562 * 15 14 13 18 18 O 1.20825 * 120.00012 * 120.00285 * 17 15 14 19 19 O 1.34235 * 119.99895 * 300.00345 * 17 15 14 20 20 C 1.52996 * 109.47252 * 140.39572 * 3 2 1 21 21 H 0.97007 * 119.99867 * 179.97438 * 7 6 4 22 22 H 1.09000 * 109.46986 * 59.99890 * 12 3 2 23 23 H 1.09001 * 109.47601 * 300.00613 * 12 3 2 24 24 H 1.09001 * 109.46922 * 180.02562 * 13 12 3 25 25 H 1.09000 * 109.47140 * 59.99976 * 13 12 3 26 26 H 1.08993 * 109.46955 * 180.02562 * 14 13 12 27 27 H 1.09000 * 109.47050 * 300.00004 * 14 13 12 28 28 H 0.96692 * 117.00039 * 179.97438 * 19 17 15 29 29 H 1.09000 * 109.47054 * 300.00151 * 20 3 2 30 30 H 1.09001 * 109.46997 * 59.99885 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1103 0.2378 1.4009 5 1 3.7308 1.0957 1.6141 6 6 2.7776 -0.6402 2.4104 7 7 2.0222 -1.6851 2.1508 8 14 3.3996 -0.3459 4.1471 9 1 2.4207 0.4889 4.8887 10 1 3.5654 -1.6482 4.8409 11 1 4.7072 0.3558 4.0922 12 6 3.1187 -1.3512 -0.5027 13 6 4.6486 -1.3508 -0.5021 14 6 5.1587 -0.2390 -1.4214 15 6 4.6480 1.1127 -0.9186 16 1 5.0109 1.2841 0.0948 17 6 5.1499 2.2077 -1.8243 18 8 4.3644 2.9150 -2.4097 19 8 6.4696 2.3973 -1.9807 20 6 3.1175 1.1122 -0.9195 21 1 1.7885 -2.3031 2.8610 22 1 2.7554 -1.5228 -1.5160 23 1 2.7556 -2.1432 0.1523 24 1 5.0123 -2.3137 -0.8607 25 1 5.0115 -1.1794 0.5113 26 1 6.2486 -0.2391 -1.4213 27 1 4.7958 -0.4104 -2.4348 28 1 6.7434 3.1116 -2.5720 29 1 2.7543 0.9406 -1.9328 30 1 2.7537 2.0753 -0.5614 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000075580772.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:57:27 Heat of formation + Delta-G solvation = -91.360114 kcal Electronic energy + Delta-G solvation = -15638.398405 eV Core-core repulsion = 13011.657389 eV Total energy + Delta-G solvation = -2626.741016 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 223.100 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -40.20749 -38.03669 -35.83218 -34.66174 -32.83438 -30.29718 -30.22225 -25.24904 -23.93488 -22.38706 -20.65411 -19.09719 -17.92669 -17.37038 -16.13380 -15.43580 -14.89722 -14.66022 -13.89004 -13.38807 -13.26000 -12.95284 -12.34099 -11.90798 -11.80617 -11.53225 -11.29789 -11.19935 -11.01883 -10.85849 -10.73573 -10.56810 -10.33740 -10.14349 -9.81396 -9.61195 -9.26666 -8.96277 -8.65128 -6.24799 -4.38475 2.54200 3.19899 3.28615 3.29021 3.36664 4.19907 4.37573 4.45583 5.03158 5.20533 5.32572 5.46557 5.80283 5.97311 6.07587 6.14291 6.26343 6.34994 6.40634 6.55778 6.63064 6.70605 6.78778 6.93876 7.16377 7.28904 7.53242 7.81710 8.00489 8.19351 8.59540 9.23209 9.30966 10.78309 Molecular weight = 223.10amu Principal moments of inertia in cm(-1) A = 0.027041 B = 0.010772 C = 0.009553 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1035.217795 B = 2598.645068 C = 2930.258342 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.521 5.521 2 C 0.271 3.729 3 C 0.159 3.841 4 C -0.518 4.518 5 H 0.073 0.927 6 C 0.072 3.928 7 N -0.871 5.871 8 Si 0.897 3.103 9 H -0.280 1.280 10 H -0.284 1.284 11 H -0.269 1.269 12 C -0.105 4.105 13 C -0.100 4.100 14 C -0.104 4.104 15 C -0.067 4.067 16 H 0.124 0.876 17 C 0.480 3.520 18 O -0.523 6.523 19 O -0.519 6.519 20 C -0.081 4.081 21 H 0.267 0.733 22 H 0.028 0.972 23 H 0.100 0.900 24 H 0.049 0.951 25 H 0.081 0.919 26 H 0.065 0.935 27 H 0.056 0.944 28 H 0.400 0.600 29 H 0.055 0.945 30 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.410 2.335 -4.970 11.770 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.198 5.198 2 C -0.045 4.045 3 C 0.156 3.844 4 C -0.556 4.556 5 H 0.091 0.909 6 C -0.133 4.133 7 N -0.507 5.507 8 Si 0.724 3.276 9 H -0.206 1.206 10 H -0.210 1.210 11 H -0.194 1.194 12 C -0.144 4.144 13 C -0.137 4.137 14 C -0.141 4.141 15 C -0.086 4.086 16 H 0.142 0.858 17 C 0.323 3.677 18 O -0.411 6.411 19 O -0.330 6.330 20 C -0.120 4.120 21 H 0.078 0.922 22 H 0.046 0.954 23 H 0.119 0.881 24 H 0.067 0.933 25 H 0.100 0.900 26 H 0.083 0.917 27 H 0.074 0.926 28 H 0.258 0.742 29 H 0.074 0.926 30 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 8.244 2.028 -4.777 9.742 hybrid contribution 0.784 0.633 0.664 1.207 sum 9.028 2.661 -4.114 10.272 Atomic orbital electron populations 1.80844 1.14202 1.11635 1.13105 1.29952 0.95459 0.90000 0.89118 1.15915 0.79553 0.92855 0.96113 1.20874 1.33055 1.10927 0.90785 0.90887 1.25026 0.94225 0.94682 0.99405 1.69829 1.34631 1.12852 1.33354 0.86491 0.79405 0.77809 0.83874 1.20612 1.21010 1.19353 1.21551 0.94352 0.99930 0.98578 1.21360 0.96624 0.95529 1.00216 1.21506 0.99986 0.93212 0.99438 1.21081 0.97396 0.91173 0.98955 0.85835 1.24176 0.79312 0.84245 0.79965 1.90678 1.56866 1.47008 1.46519 1.84602 1.27122 1.55911 1.65374 1.21363 0.91428 0.99908 0.99309 0.92246 0.95357 0.88124 0.93258 0.90037 0.91671 0.92569 0.74243 0.92588 0.91562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -13.93 18.54 42.16 0.78 -13.14 16 2 C 0.27 6.81 12.60 -20.76 -0.26 6.54 16 3 C 0.16 3.49 0.45 -158.45 -0.07 3.42 16 4 C -0.52 -12.01 6.04 -34.44 -0.21 -12.22 16 5 H 0.07 1.62 6.71 -52.49 -0.35 1.27 16 6 C 0.07 1.75 5.14 -17.82 -0.09 1.66 16 7 N -0.87 -22.52 10.41 55.43 0.58 -21.94 16 8 Si 0.90 19.30 29.54 -169.99 -5.02 14.28 16 9 H -0.28 -6.26 7.11 56.52 0.40 -5.86 16 10 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 11 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 12 C -0.11 -2.13 4.47 -26.73 -0.12 -2.25 16 13 C -0.10 -1.68 5.70 -26.73 -0.15 -1.83 16 14 C -0.10 -1.54 5.14 -26.73 -0.14 -1.67 16 15 C -0.07 -1.09 2.40 -91.74 -0.22 -1.31 16 16 H 0.12 2.02 6.62 -51.93 -0.34 1.68 16 17 C 0.48 7.39 7.63 36.01 0.27 7.67 16 18 O -0.52 -9.53 16.74 -18.75 -0.31 -9.84 16 19 O -0.52 -6.20 13.33 -39.27 -0.52 -6.72 16 20 C -0.08 -1.56 3.22 -26.71 -0.09 -1.64 16 21 H 0.27 6.74 8.31 -40.82 -0.34 6.40 16 22 H 0.03 0.54 8.14 -51.93 -0.42 0.11 16 23 H 0.10 2.33 6.07 -51.93 -0.32 2.01 16 24 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 25 H 0.08 1.47 7.22 -51.93 -0.37 1.10 16 26 H 0.06 0.85 8.11 -51.93 -0.42 0.42 16 27 H 0.06 0.80 8.14 -51.93 -0.42 0.38 16 28 H 0.40 2.96 9.10 45.56 0.41 3.37 16 29 H 0.06 1.06 8.10 -51.93 -0.42 0.64 16 30 H 0.07 1.32 8.10 -51.93 -0.42 0.90 16 LS Contribution 255.41 15.07 3.85 3.85 Total: -1.00 -28.98 255.41 -4.36 -33.34 By element: Atomic # 1 Polarization: 4.46 SS G_CDS: -2.64 Total: 1.83 kcal Atomic # 6 Polarization: -0.57 SS G_CDS: -1.07 Total: -1.64 kcal Atomic # 7 Polarization: -36.45 SS G_CDS: 1.36 Total: -35.09 kcal Atomic # 8 Polarization: -15.73 SS G_CDS: -0.84 Total: -16.57 kcal Atomic # 14 Polarization: 19.30 SS G_CDS: -5.02 Total: 14.28 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -28.98 -4.36 -33.34 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000075580772.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.021 kcal (2) G-P(sol) polarization free energy of solvation -28.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.000 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.361 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.339 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.360 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds